BLASTX nr result
ID: Zingiber23_contig00035140
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00035140
(533 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicag... 105 4e-23
ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicag... 105 2e-22
ref|YP_007475705.1| hypothetical chloroplast RF34 [Zingiber spec... 108 6e-22
ref|XP_006841200.1| hypothetical protein AMTR_s00334p00015220 [A... 106 4e-21
ref|YP_008854595.1| hypothetical chloroplast RF34 [Curcuma rosco... 105 5e-21
gb|AHA13011.1| hypothetical chloroplast RF34 [Costus pulverulentus] 103 2e-20
gb|AHA12925.1| hypothetical chloroplast RF34 [Monocostus uniflorus] 103 2e-20
gb|AHA12840.1| hypothetical chloroplast RF34 [Maranta leuconeura] 103 2e-20
ref|YP_008854512.1| hypothetical chloroplast RF34 [Ravenala mada... 103 2e-20
ref|YP_007475620.1| hypothetical chloroplast RF34 [Heliconia col... 103 2e-20
gb|AEX93910.1| hypothetical chloroplast RF34 (chloroplast) [Scad... 103 3e-20
gb|AEX93908.1| hypothetical chloroplast RF34 (chloroplast) [Crin... 103 3e-20
ref|YP_008758189.1| photosystem I assembly protein Ycf3 (chlorop... 102 4e-20
gb|EPS73911.1| hypothetical protein M569_00846 [Genlisea aurea] 102 4e-20
gb|AAZ03966.1| Ycf3 [Yucca schidigera] 102 4e-20
ref|YP_006073105.1| photosystem I assembly protein ycf3 (chlorop... 102 4e-20
gb|AEZ48788.1| photosystem I assembly protein Ycf3, partial [Rav... 102 4e-20
gb|AEZ48784.1| photosystem I assembly protein Ycf3, partial [Pho... 102 4e-20
gb|AEZ48773.1| photosystem I assembly protein Ycf3, partial [Iri... 102 4e-20
gb|AEZ48763.1| photosystem I assembly protein Ycf3 [Molineria ca... 102 4e-20
>ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355488619|gb|AES69822.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 160
Score = 105 bits (262), Expect(2) = 4e-23
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = -1
Query: 326 REGVTYSDRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
R +TYSDRGEQAI QGDSEIAE+W DQAAEYWKQAIAL+PGNYIEAQNWLKIT RFE
Sbjct: 103 RNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 160
Score = 28.1 bits (61), Expect(2) = 4e-23
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3
Query: 360 RMR*ETLKYGSKGRSYL 310
RM ETLKYGSKGR+ L
Sbjct: 90 RMSQETLKYGSKGRNLL 106
>ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355495957|gb|AES77160.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 70
Score = 105 bits (262), Expect(2) = 2e-22
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = -1
Query: 326 REGVTYSDRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
R +TYSDRGEQAI QGDSEIAE+W DQAAEYWKQAIAL+PGNYIEAQNWLKIT RFE
Sbjct: 13 RNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 70
Score = 26.2 bits (56), Expect(2) = 2e-22
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 348 ETLKYGSKGRSYL 310
ETLKYGSKGR+ L
Sbjct: 4 ETLKYGSKGRNLL 16
>ref|YP_007475705.1| hypothetical chloroplast RF34 [Zingiber spectabile]
gi|449326185|gb|AGE92770.1| hypothetical chloroplast
RF34 [Zingiber spectabile]
Length = 169
Score = 108 bits (271), Expect = 6e-22
Identities = 51/55 (92%), Positives = 53/55 (96%)
Frame = -1
Query: 317 VTYSDRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
+ + DRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE
Sbjct: 115 ICHYDRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 169
>ref|XP_006841200.1| hypothetical protein AMTR_s00334p00015220 [Amborella trichopoda]
gi|548843107|gb|ERN02875.1| hypothetical protein
AMTR_s00334p00015220 [Amborella trichopoda]
Length = 70
Score = 106 bits (264), Expect = 4e-21
Identities = 53/67 (79%), Positives = 56/67 (83%)
Frame = -1
Query: 353 GRKLSSTVRREGVTYSDRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWL 174
GR LS+ YSDRGEQAI QGDSEIAEAW DQAAEYWKQA+AL+PGNYIEAQNWL
Sbjct: 12 GRNLSA--------YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQALALTPGNYIEAQNWL 63
Query: 173 KITRRFE 153
KITRRFE
Sbjct: 64 KITRRFE 70
>ref|YP_008854595.1| hypothetical chloroplast RF34 [Curcuma roscoeana]
gi|374411597|gb|AEZ48789.1| photosystem I assembly
protein Ycf3, partial [Renealmia alpinia]
gi|449326793|gb|AGE93371.1| hypothetical chloroplast
RF34 [Alpinia zerumbet] gi|557637502|gb|AHA13097.1|
hypothetical chloroplast RF34 [Curcuma roscoeana]
Length = 168
Score = 105 bits (263), Expect = 5e-21
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 168
>gb|AHA13011.1| hypothetical chloroplast RF34 [Costus pulverulentus]
Length = 168
Score = 103 bits (258), Expect = 2e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAHNWLKITRRFE 168
>gb|AHA12925.1| hypothetical chloroplast RF34 [Monocostus uniflorus]
Length = 168
Score = 103 bits (258), Expect = 2e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAHNWLKITRRFE 168
>gb|AHA12840.1| hypothetical chloroplast RF34 [Maranta leuconeura]
Length = 168
Score = 103 bits (258), Expect = 2e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAHNWLKITRRFE 168
>ref|YP_008854512.1| hypothetical chloroplast RF34 [Ravenala madagascariensis]
gi|557637000|gb|AHA12601.1| hypothetical chloroplast
RF34 [Ravenala madagascariensis]
Length = 170
Score = 103 bits (258), Expect = 2e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEA NWLKITRRFE
Sbjct: 121 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAHNWLKITRRFE 170
>ref|YP_007475620.1| hypothetical chloroplast RF34 [Heliconia collinsiana]
gi|449326099|gb|AGE92685.1| hypothetical chloroplast
RF34 [Heliconia collinsiana] gi|557637157|gb|AHA12756.1|
hypothetical chloroplast RF34 [Canna indica]
gi|557637589|gb|AHA13183.1| hypothetical chloroplast
RF34 [Thaumatococcus daniellii]
Length = 168
Score = 103 bits (258), Expect = 2e-20
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAHNWLKITRRFE 168
>gb|AEX93910.1| hypothetical chloroplast RF34 (chloroplast) [Scadoxus cinnabarinus]
Length = 167
Score = 103 bits (256), Expect = 3e-20
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA+NWLKITRRFE
Sbjct: 118 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEARNWLKITRRFE 167
>gb|AEX93908.1| hypothetical chloroplast RF34 (chloroplast) [Crinum asiaticum]
Length = 169
Score = 103 bits (256), Expect = 3e-20
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA+NWLKITRRFE
Sbjct: 120 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEARNWLKITRRFE 169
>ref|YP_008758189.1| photosystem I assembly protein Ycf3 (chloroplast) [Veratrum
patulum] gi|549531718|gb|AGX28844.1| photosystem I
assembly protein Ycf3 (chloroplast) [Veratrum patulum]
Length = 170
Score = 102 bits (255), Expect = 4e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|EPS73911.1| hypothetical protein M569_00846 [Genlisea aurea]
Length = 163
Score = 102 bits (255), Expect = 4e-20
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -1
Query: 311 YSDRGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
YSDRGEQAI QGDSEIAE W DQAA+YWKQAIAL+PGNYIEAQNWLKITRRF+
Sbjct: 111 YSDRGEQAIRQGDSEIAEVWFDQAAQYWKQAIALTPGNYIEAQNWLKITRRFD 163
>gb|AAZ03966.1| Ycf3 [Yucca schidigera]
Length = 170
Score = 102 bits (255), Expect = 4e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA NWLKITRRFE
Sbjct: 121 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 170
>ref|YP_006073105.1| photosystem I assembly protein ycf3 (chloroplast) [Elaeis
guineensis] gi|456061659|ref|YP_007475790.1|
hypothetical chloroplast RF34 [Pseudophoenix vinifera]
gi|546138060|ref|YP_008578286.1| photosystem I assembly
protein Ycf3 (chloroplast) [Cocos nucifera]
gi|325305709|gb|ADZ10870.1| photosystem I assembly
protein ycf3 (chloroplast) [Elaeis guineensis]
gi|449326271|gb|AGE92855.1| hypothetical chloroplast
RF34 [Pseudophoenix vinifera]
gi|528748777|gb|AGS43467.1| photosystem I assembly
protein Ycf3 (chloroplast) [Cocos nucifera]
Length = 170
Score = 102 bits (255), Expect = 4e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AEZ48788.1| photosystem I assembly protein Ycf3, partial [Ravenea
hildebrandtii]
Length = 168
Score = 102 bits (255), Expect = 4e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AEZ48784.1| photosystem I assembly protein Ycf3, partial [Phormium tenax]
Length = 126
Score = 102 bits (255), Expect = 4e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA NWLKITRRFE
Sbjct: 77 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 126
>gb|AEZ48773.1| photosystem I assembly protein Ycf3, partial [Iris virginica]
Length = 169
Score = 102 bits (255), Expect = 4e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA NWLKITRRFE
Sbjct: 120 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>gb|AEZ48763.1| photosystem I assembly protein Ycf3 [Molineria capitulata]
gi|374411580|gb|AEZ48781.1| photosystem I assembly
protein Ycf3, partial [Neoastelia spectabilis]
Length = 168
Score = 102 bits (255), Expect = 4e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -1
Query: 302 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALSPGNYIEAQNWLKITRRFE 153
RGEQAILQGDSEIAEAWSDQAAEYWKQAIAL+PGNYIEA NWLKITRRFE
Sbjct: 119 RGEQAILQGDSEIAEAWSDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168