BLASTX nr result
ID: Zingiber23_contig00035084
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00035084
(221 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247... 77 2e-12
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera] 77 2e-12
gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus pe... 77 3e-12
ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotei... 75 9e-12
ref|XP_003611682.1| RNA-binding protein with multiple splicing [... 74 2e-11
ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotei... 74 2e-11
gb|EXB54173.1| RNA-binding protein with multiple splicing 2 [Mor... 73 4e-11
gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus... 73 4e-11
ref|XP_006425958.1| hypothetical protein CICLE_v10026071mg [Citr... 73 4e-11
ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citr... 73 4e-11
gb|ABK25922.1| unknown [Picea sitchensis] 72 6e-11
ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotei... 72 8e-11
ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotei... 72 1e-10
ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotei... 72 1e-10
ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group] g... 72 1e-10
dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas] 72 1e-10
gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indi... 72 1e-10
ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotei... 70 3e-10
ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotei... 70 3e-10
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/61 (65%), Positives = 44/61 (72%)
Frame = -1
Query: 191 PPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFREFAGYESAKLR 12
PP+A Y PP+Y Q S D+VRTLFIAGLP DVK REIYNLFREF GYES+ LR
Sbjct: 59 PPFASYAPPLY--------PQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR 110
Query: 11 S 9
S
Sbjct: 111 S 111
>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/61 (65%), Positives = 44/61 (72%)
Frame = -1
Query: 191 PPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFREFAGYESAKLR 12
PP+A Y PP+Y Q S D+VRTLFIAGLP DVK REIYNLFREF GYES+ LR
Sbjct: 62 PPFASYAPPLY--------PQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR 113
Query: 11 S 9
S
Sbjct: 114 S 114
>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/61 (65%), Positives = 44/61 (72%)
Frame = -1
Query: 191 PPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFREFAGYESAKLR 12
PP+A Y PP+Y Q S D+VRTLFIAGLP DVK REIYNLFREF GYES+ LR
Sbjct: 59 PPFASYAPPLY--------PQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR 110
Query: 11 S 9
S
Sbjct: 111 S 111
>gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus persica]
Length = 328
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = -1
Query: 200 QHSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFREFAGYESA 21
QH PP++ Y P + QPS D+VRTLF+AGLP DVK REIYNLFREF GYES+
Sbjct: 50 QHPPPFSSYAPAL--------VPQPSHDEVRTLFVAGLPEDVKPREIYNLFREFPGYESS 101
Query: 20 KLRS 9
LR+
Sbjct: 102 HLRT 105
>ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 308
Score = 75.1 bits (183), Expect = 9e-12
Identities = 42/69 (60%), Positives = 46/69 (66%)
Frame = -1
Query: 215 PLHQSQHSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFREFA 36
PL Q+ P+ PP+Y Q S DDVRTLFIAGLP DVK REIYNLFREFA
Sbjct: 35 PLPIPQYHHPHHPSAPPLY--------PQDSHDDVRTLFIAGLPEDVKPREIYNLFREFA 86
Query: 35 GYESAKLRS 9
GYES+ LRS
Sbjct: 87 GYESSHLRS 95
>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with
multiple splicing [Medicago truncatula]
Length = 340
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/71 (60%), Positives = 47/71 (66%)
Frame = -1
Query: 221 LPPLHQSQHSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFRE 42
LPP H P Y Q +Y + YV S S +DVRTLFIAGLP DVK REIYNLFRE
Sbjct: 47 LPPPHHPHPHPQYIPQQQQVYDS-YVPSP-LASTNDVRTLFIAGLPEDVKPREIYNLFRE 104
Query: 41 FAGYESAKLRS 9
F GYES+ LRS
Sbjct: 105 FPGYESSHLRS 115
>ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 327
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = -1
Query: 218 PPLHQSQ-HSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFRE 42
PP H Q + PP QPP Y Q ++D+VRTLF+AGLP DVK REIYNLFRE
Sbjct: 38 PPHHLVQAYYPP----QPPPYAPYAAPLVAQSAYDEVRTLFVAGLPEDVKAREIYNLFRE 93
Query: 41 FAGYESAKLRS 9
F GYES+ LR+
Sbjct: 94 FPGYESSHLRT 104
>gb|EXB54173.1| RNA-binding protein with multiple splicing 2 [Morus notabilis]
Length = 322
Score = 72.8 bits (177), Expect = 4e-11
Identities = 45/72 (62%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Frame = -1
Query: 218 PPLHQSQHSPPYALY-QPPIYGATYVESADQP-SFDDVRTLFIAGLPGDVKIREIYNLFR 45
P HQ + PYA + Q P YGA Y S P S D+VRTLF+AGLP DVK REIYNLFR
Sbjct: 36 PAAHQL--AQPYAPHPQQPPYGA-YTPSLVAPCSHDEVRTLFVAGLPEDVKPREIYNLFR 92
Query: 44 EFAGYESAKLRS 9
EF GYES+ LRS
Sbjct: 93 EFPGYESSHLRS 104
>gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus vulgaris]
Length = 337
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/71 (56%), Positives = 48/71 (67%)
Frame = -1
Query: 221 LPPLHQSQHSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFRE 42
+PP H H P A +Q +Y + QPS ++VRTLF+AGLP DVK REIYNLFRE
Sbjct: 45 VPPAHHV-HPPYVAQHQQQAVFGSY--GSPQPSTNEVRTLFVAGLPEDVKPREIYNLFRE 101
Query: 41 FAGYESAKLRS 9
F GYES+ LRS
Sbjct: 102 FPGYESSHLRS 112
>ref|XP_006425958.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527948|gb|ESR39198.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 326
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/75 (54%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Frame = -1
Query: 218 PPLHQSQHSPPYALY----QPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNL 51
PP +PP Y QPP G+ S+D+VRTLF+AGLP DVK REIYNL
Sbjct: 25 PPPPGGVVAPPTQPYMPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNL 84
Query: 50 FREFAGYESAKLRSS 6
FREF GYES+ LRSS
Sbjct: 85 FREFPGYESSHLRSS 99
>ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527947|gb|ESR39197.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 322
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/75 (54%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Frame = -1
Query: 218 PPLHQSQHSPPYALY----QPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNL 51
PP +PP Y QPP G+ S+D+VRTLF+AGLP DVK REIYNL
Sbjct: 25 PPPPGGVVAPPTQPYMPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIYNL 84
Query: 50 FREFAGYESAKLRSS 6
FREF GYES+ LRSS
Sbjct: 85 FREFPGYESSHLRSS 99
>gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/94 (45%), Positives = 49/94 (52%), Gaps = 22/94 (23%)
Frame = -1
Query: 218 PPLHQSQHSPPYALYQPPIYGATYVESAD----------------------QPSFDDVRT 105
PP H H PP + PP Y V+ + QP D+VRT
Sbjct: 27 PPTHP--HPPPPQHFPPPYYAPPPVQYPEPQYLHHYNYYLSQQQQQPQQQQQPQQDEVRT 84
Query: 104 LFIAGLPGDVKIREIYNLFREFAGYESAKLRSSE 3
LFIAGLP DVK REIYNLFREF GY S +LR+SE
Sbjct: 85 LFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSE 118
>ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Citrus
sinensis]
Length = 326
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Frame = -1
Query: 218 PPLHQSQHSPPYALY------QPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIY 57
PP +PP Y QPP G+ S+D+VRTLF+AGLP DVK REIY
Sbjct: 27 PPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFPAYGSYDEVRTLFVAGLPEDVKPREIY 86
Query: 56 NLFREFAGYESAKLRSS 6
NLFREF GYES+ LRSS
Sbjct: 87 NLFREFPGYESSHLRSS 103
>ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Solanum tuberosum]
Length = 315
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Frame = -1
Query: 218 PPLHQSQHSPPYALYQP---PIYGATYVESAD----QPSFDDVRTLFIAGLPGDVKIREI 60
PP + H+ P + QP P Y + SA Q S DVRTLFIAGLP DVK REI
Sbjct: 26 PPPGTTLHALPPVVVQPLPIPQYHHPHHPSAPLLYPQDSHGDVRTLFIAGLPEDVKPREI 85
Query: 59 YNLFREFAGYESAKLRS 9
YNLFREFAGYES+ LRS
Sbjct: 86 YNLFREFAGYESSHLRS 102
>ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Solanum tuberosum]
Length = 316
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
Frame = -1
Query: 218 PPLHQSQHSPPYALYQP---PIYGATYVESAD----QPSFDDVRTLFIAGLPGDVKIREI 60
PP + H+ P + QP P Y + SA Q S DVRTLFIAGLP DVK REI
Sbjct: 26 PPPGTTLHALPPVVVQPLPIPQYHHPHHPSAPLLYPQDSHGDVRTLFIAGLPEDVKPREI 85
Query: 59 YNLFREFAGYESAKLRS 9
YNLFREFAGYES+ LRS
Sbjct: 86 YNLFREFAGYESSHLRS 102
>ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like
[Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa
Japonica Group] gi|215692539|dbj|BAG87959.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 219
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 23/94 (24%)
Frame = -1
Query: 218 PPLHQSQHSPP-----------YALYQ----------PPIYGATYVESADQP--SFDDVR 108
PP H S +PP YA Y+ PP Y Y + A +P D++R
Sbjct: 10 PPPHSSYAAPPPPPPPPPGTSLYASYRHHAYPPHPPPPPAYVGAYYDHAAEPLPPRDELR 69
Query: 107 TLFIAGLPGDVKIREIYNLFREFAGYESAKLRSS 6
TLFIAGLPGD K RE+YNLFR+F GY S+ LR+S
Sbjct: 70 TLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTS 103
>dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/70 (57%), Positives = 45/70 (64%)
Frame = -1
Query: 218 PPLHQSQHSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFREF 39
P + Q+Q PP+ Y PP Y A D VRTLF+AGLP DVK REIYNLFREF
Sbjct: 48 PYIPQAQPPPPFTSY-PPSY-------APHAPHDPVRTLFVAGLPDDVKPREIYNLFREF 99
Query: 38 AGYESAKLRS 9
GYES+ LRS
Sbjct: 100 PGYESSHLRS 109
>gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 23/94 (24%)
Frame = -1
Query: 218 PPLHQSQHSPP-----------YALYQ----------PPIYGATYVESADQP--SFDDVR 108
PP H S +PP YA Y+ PP Y Y + A +P D++R
Sbjct: 10 PPPHSSYAAPPPPPPPPPGTSPYASYRHHAYPPHPPPPPAYVGAYYDHAAEPLPPRDELR 69
Query: 107 TLFIAGLPGDVKIREIYNLFREFAGYESAKLRSS 6
TLFIAGLPGD K RE+YNLFR+F GY S+ LR+S
Sbjct: 70 TLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTS 103
>ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X3
[Glycine max]
Length = 338
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/71 (56%), Positives = 46/71 (64%)
Frame = -1
Query: 221 LPPLHQSQHSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFRE 42
+PP H H P A +Q +Y A Q S +VRTLF+AGLP DVK REIYNLFRE
Sbjct: 45 VPPAHHL-HPPYVAQHQQQAVFGSY--GAPQSSTHEVRTLFVAGLPEDVKPREIYNLFRE 101
Query: 41 FAGYESAKLRS 9
F GYES+ LRS
Sbjct: 102 FPGYESSHLRS 112
>ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X2
[Glycine max]
Length = 339
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/71 (56%), Positives = 46/71 (64%)
Frame = -1
Query: 221 LPPLHQSQHSPPYALYQPPIYGATYVESADQPSFDDVRTLFIAGLPGDVKIREIYNLFRE 42
+PP H H P A +Q +Y A Q S +VRTLF+AGLP DVK REIYNLFRE
Sbjct: 45 VPPAHHL-HPPYVAQHQQQAVFGSY--GAPQSSTHEVRTLFVAGLPEDVKPREIYNLFRE 101
Query: 41 FAGYESAKLRS 9
F GYES+ LRS
Sbjct: 102 FPGYESSHLRS 112