BLASTX nr result
ID: Zingiber23_contig00035074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00035074
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 109 3e-22
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 109 3e-22
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 108 7e-22
ref|XP_004152016.1| PREDICTED: transcription initiation factor I... 108 1e-21
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 107 2e-21
gb|EXB41552.1| Transcription initiation factor IIF subunit alpha... 106 3e-21
gb|EMS62581.1| Transcription initiation factor IIF subunit alpha... 104 1e-20
ref|XP_006467340.1| PREDICTED: transcription initiation factor I... 103 2e-20
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr... 103 2e-20
gb|EOY28872.1| Transcription activators,DNA binding,RNA polymera... 103 3e-20
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera... 103 3e-20
ref|XP_004486214.1| PREDICTED: transcription initiation factor I... 103 3e-20
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus... 102 4e-20
dbj|BAK05201.1| predicted protein [Hordeum vulgare subsp. vulgare] 102 4e-20
ref|XP_003573836.1| PREDICTED: transcription initiation factor I... 102 5e-20
gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus... 102 7e-20
gb|EPS63331.1| hypothetical protein M569_11453, partial [Genlise... 102 7e-20
ref|XP_006586768.1| PREDICTED: transcription initiation factor I... 101 9e-20
ref|XP_004293352.1| PREDICTED: transcription initiation factor I... 101 1e-19
gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus pe... 100 2e-19
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
gi|550335193|gb|ERP58675.1| hypothetical protein
POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 109 bits (273), Expect = 3e-22
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL L+P CSGCGS TDLYGS CKH TLCL+CGK+M NRG+C CGA +T+LIREYN
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60
Query: 235 VRAS 246
VRAS
Sbjct: 61 VRAS 64
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 109 bits (273), Expect = 3e-22
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL L+P CSGCGS TDLYGS CKH TLCL+CGK+M NRG+C CGA +T+LIREYN
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60
Query: 235 VRAS 246
VRAS
Sbjct: 61 VRAS 64
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 108 bits (270), Expect = 7e-22
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL+LKP CSGCGS TDLYGS CKH TLCL+CGK+M NRG+C CG +++LIREYN
Sbjct: 1 MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60
Query: 235 VRAS 246
VRAS
Sbjct: 61 VRAS 64
>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Cucumis sativus] gi|449517383|ref|XP_004165725.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like [Cucumis sativus]
Length = 538
Score = 108 bits (269), Expect = 1e-21
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL+LK CSGCGS T+LYGS CKH TLCL+CGK+M N+G+C CGA +T+LIREYN
Sbjct: 1 MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 235 VRASA 249
VRASA
Sbjct: 61 VRASA 65
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 107 bits (266), Expect = 2e-21
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL+LKP CSGCGS TDLYGS CKH TLCLSCGK+M N G+C CG +T+LIREYN
Sbjct: 1 MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60
Query: 235 VRASA 249
VR ++
Sbjct: 61 VRTNS 65
>gb|EXB41552.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
Length = 483
Score = 106 bits (265), Expect = 3e-21
Identities = 46/64 (71%), Positives = 53/64 (82%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MS DL+LKP CSGCGSA+DLYGS CKH TLCL+CGK+M N +C CGA +T+LIREYN
Sbjct: 1 MSMDLILKPSCSGCGSASDLYGSNCKHMTLCLTCGKTMAENHAKCYDCGATVTRLIREYN 60
Query: 235 VRAS 246
VRAS
Sbjct: 61 VRAS 64
>gb|EMS62581.1| Transcription initiation factor IIF subunit alpha [Triticum urartu]
Length = 162
Score = 104 bits (259), Expect = 1e-20
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +1
Query: 58 SFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYNV 237
S DLVLKP C GCGS +DLYG+GCKHTTLC SCGKSM +R RC C A IT LIREYNV
Sbjct: 3 SVDLVLKPACEGCGSTSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSALITNLIREYNV 62
Query: 238 RASA 249
RA+A
Sbjct: 63 RANA 66
>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Citrus sinensis]
gi|568825955|ref|XP_006467341.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Citrus sinensis]
Length = 538
Score = 103 bits (258), Expect = 2e-20
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL+LKP CSGCGS DLYGS CKH TLCL+CGK+M N+ +C CGA +T+LIREYN
Sbjct: 1 MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60
Query: 235 VRAS 246
VR S
Sbjct: 61 VRPS 64
>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|567915083|ref|XP_006449855.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552465|gb|ESR63094.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 103 bits (258), Expect = 2e-20
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL+LKP CSGCGS DLYGS CKH TLCL+CGK+M N+ +C CGA +T+LIREYN
Sbjct: 1 MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60
Query: 235 VRAS 246
VR S
Sbjct: 61 VRPS 64
>gb|EOY28872.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 4 [Theobroma cacao]
Length = 480
Score = 103 bits (256), Expect = 3e-20
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL+LK CSGCGS DLYGS CKH TLC++CGK+M N+G+C CGA +T+LIREYN
Sbjct: 1 MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60
Query: 235 VRAS 246
VR S
Sbjct: 61 VRPS 64
>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 1 [Theobroma cacao]
Length = 549
Score = 103 bits (256), Expect = 3e-20
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MSFDL+LK CSGCGS DLYGS CKH TLC++CGK+M N+G+C CGA +T+LIREYN
Sbjct: 1 MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60
Query: 235 VRAS 246
VR S
Sbjct: 61 VRPS 64
>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Cicer arietinum]
Length = 538
Score = 103 bits (256), Expect = 3e-20
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
M+ DL LK CCSGC S TDLYGS CKH TLCL+CGK+M NR +C CGA +T+LIREYN
Sbjct: 1 MTMDLQLKSCCSGCRSTTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYN 60
Query: 235 VRASA 249
VRAS+
Sbjct: 61 VRASS 65
>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
Length = 540
Score = 102 bits (255), Expect = 4e-20
Identities = 44/65 (67%), Positives = 53/65 (81%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MS DL+LKP C GCGS TDLYGS CKH TLCL+CGK+M N+ +C CGA +T+LIREY+
Sbjct: 1 MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60
Query: 235 VRASA 249
VRAS+
Sbjct: 61 VRASS 65
>dbj|BAK05201.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 102 bits (255), Expect = 4e-20
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +1
Query: 58 SFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYNV 237
S DLVLKP C GCGS +DLYG+GCKHTTLC SCGKSM +R RC C A IT LIREYNV
Sbjct: 3 SVDLVLKPACEGCGSTSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSAPITNLIREYNV 62
Query: 238 RASA 249
RA+A
Sbjct: 63 RANA 66
>ref|XP_003573836.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Brachypodium distachyon]
Length = 530
Score = 102 bits (254), Expect = 5e-20
Identities = 47/64 (73%), Positives = 51/64 (79%)
Frame = +1
Query: 58 SFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYNV 237
S DLVLKP C GCGS +DLYG+GCKHTTLC SCGKSM +R RC C A IT LIREYNV
Sbjct: 3 SVDLVLKPACEGCGSPSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSAPITNLIREYNV 62
Query: 238 RASA 249
RA+A
Sbjct: 63 RANA 66
>gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
Length = 540
Score = 102 bits (253), Expect = 7e-20
Identities = 46/65 (70%), Positives = 51/65 (78%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MS DL LK CSGCGS TDLYGS CKH TLCLSCGK+M NR +C CG +T+LIREYN
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYN 60
Query: 235 VRASA 249
VRAS+
Sbjct: 61 VRASS 65
>gb|EPS63331.1| hypothetical protein M569_11453, partial [Genlisea aurea]
Length = 371
Score = 102 bits (253), Expect = 7e-20
Identities = 46/64 (71%), Positives = 49/64 (76%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MS DL+LKP C GCGS T+LYGS CKH TLCLSCGK M NR +C CG IT LIREYN
Sbjct: 6 MSIDLILKPSCGGCGSMTELYGSTCKHLTLCLSCGKRMAENRAKCYECGTPITVLIREYN 65
Query: 235 VRAS 246
VRAS
Sbjct: 66 VRAS 69
>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 536
Score = 101 bits (252), Expect = 9e-20
Identities = 46/65 (70%), Positives = 51/65 (78%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MS DL LK CSGCGS TDLYGS CKH TLCL CGK+M A R +C CGA +T+LIREYN
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60
Query: 235 VRASA 249
VRAS+
Sbjct: 61 VRASS 65
>ref|XP_004293352.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Fragaria vesca subsp. vesca]
Length = 550
Score = 101 bits (251), Expect = 1e-19
Identities = 43/64 (67%), Positives = 51/64 (79%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MS DL+LKP C GCGS +DLYGS CKH TLC +CGK+M N+ +C CGA +T+LIREYN
Sbjct: 1 MSSDLLLKPSCGGCGSTSDLYGSNCKHMTLCCACGKTMAENKAKCYDCGAVVTRLIREYN 60
Query: 235 VRAS 246
VRAS
Sbjct: 61 VRAS 64
>gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
Length = 537
Score = 100 bits (249), Expect = 2e-19
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +1
Query: 55 MSFDLVLKPCCSGCGSATDLYGSGCKHTTLCLSCGKSMVANRGRCQHCGAFITQLIREYN 234
MS DL L+ CSGCGS ++LYGS CKH TLCLSCGK+M NR +C CGA +T+LIREYN
Sbjct: 1 MSADLTLRSSCSGCGSTSELYGSNCKHMTLCLSCGKTMAENRAKCFDCGAIVTRLIREYN 60
Query: 235 VRAS 246
VRAS
Sbjct: 61 VRAS 64