BLASTX nr result
ID: Zingiber23_contig00035027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00035027
(584 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30522.1| ORF 143 [Glycine max] 199 6e-49
gb|AFK49064.1| unknown [Lotus japonicus] 162 6e-38
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 65 6e-23
tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea m... 106 4e-21
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 63 7e-20
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 100 5e-19
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm... 100 5e-19
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [S... 91 2e-16
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays] 83 6e-14
tpg|DAA43627.1| TPA: hypothetical protein ZEAMMB73_508361 [Zea m... 81 2e-13
gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata] 80 4e-13
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 45 1e-12
ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguic... 76 7e-12
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 76 7e-12
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re... 42 3e-11
ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|AB... 72 1e-10
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab... 57 4e-08
>emb|CAA30522.1| ORF 143 [Glycine max]
Length = 143
Score = 199 bits (505), Expect = 6e-49
Identities = 105/145 (72%), Positives = 112/145 (77%)
Frame = -1
Query: 437 MRQKIFFLKRFDSELLYVQGSILKSFQRFPLLCPCQQTIRNTSTFLEQVRVK*Q*FEALL 258
MRQKIFFLK+FDSEL YVQG I K FQRF L N S L+ R+ +
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVST---NNSKCLDFFRIGPSQIAMIR 57
Query: 257 FTLHYFGNLRTRPYGYVKYRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDE 78
TLHYFGN RT+ YGYVKYRISNPSRKR TDTQF+VSKQNSILD+IDTYRILWKAVFDE
Sbjct: 58 STLHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSILDIIDTYRILWKAVFDE 117
Query: 77 SRMYGLEGDLSYLSRSTLQYGVKKP 3
SRMYGLEGDLSYLSRSTLQYG KKP
Sbjct: 118 SRMYGLEGDLSYLSRSTLQYGAKKP 142
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 162 bits (410), Expect = 6e-38
Identities = 88/127 (69%), Positives = 95/127 (74%), Gaps = 12/127 (9%)
Frame = -1
Query: 347 LLCPCQQTIRNTSTFLEQVRVK*Q*FEALLF------------TLHYFGNLRTRPYGYVK 204
++CP R + FL+ VRV Q LF TLHYF NLRT+ YGYVK
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLFRLGPSQIAMIRSTLHYFENLRTQSYGYVK 60
Query: 203 YRISNPSRKRRETDTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTL 24
YRISNPS+KRRETDTQF+VSKQNSILDLIDTYRIL KAVFDESRMYGLEGDLSYLSRSTL
Sbjct: 61 YRISNPSKKRRETDTQFQVSKQNSILDLIDTYRILRKAVFDESRMYGLEGDLSYLSRSTL 120
Query: 23 QYGVKKP 3
QYG KKP
Sbjct: 121 QYGAKKP 127
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
gi|32480905|ref|NP_862814.1| hypothetical protein
CafeCp092 [Calycanthus floridus var. glaucus]
gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region gi|32399427|emb|CAD28768.1|
hypothetical protein [Calycanthus floridus var. glaucus]
gi|32399441|emb|CAD28782.1| hypothetical protein
[Calycanthus floridus var. glaucus]
Length = 75
Score = 65.5 bits (158), Expect(3) = 6e-23
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -3
Query: 351 SLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY 253
SLTLSVSTNNSKYLDFFRTGPSQIA IRSTSFY
Sbjct: 30 SLTLSVSTNNSKYLDFFRTGPSQIATIRSTSFY 62
Score = 61.2 bits (147), Expect(3) = 6e-23
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 437 MRQKIFFLKRFDSELLYVQGSILKSFQRFPL 345
MRQKIFFLKRFDSELLYVQGSILKSFQRF L
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSL 31
Score = 26.9 bits (58), Expect(3) = 6e-23
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2
Query: 250 YTISET*GLDRMDM 209
YTISET GL+RMDM
Sbjct: 62 YTISETQGLNRMDM 75
>tpg|DAA60526.1| TPA: hypothetical protein ZEAMMB73_222606 [Zea mays]
Length = 57
Score = 106 bits (265), Expect = 4e-21
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = -1
Query: 164 DTQFKVSKQNSILDLIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
DTQFKVSKQNSILDLID YRILWKAVFDESRMYGLEGDLSY+SRSTLQYG KKP
Sbjct: 2 DTQFKVSKQNSILDLIDPYRILWKAVFDESRMYGLEGDLSYISRSTLQYGAKKP 55
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
gi|134093268|ref|YP_001109569.1| hypothetical protein
Poptr_cp092 [Populus trichocarpa]
gi|133712111|gb|ABO36754.1| conserved hypothetical
protein [Populus trichocarpa]
gi|133712130|gb|ABO36773.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 65
Score = 63.2 bits (152), Expect(2) = 7e-20
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -2
Query: 250 YTISET*GLDRMDM*NTGFPILAGKGGKRILNLK 149
YTISET GL+RMDM NTGFPILAGKGGKRILNLK
Sbjct: 32 YTISETQGLNRMDMENTGFPILAGKGGKRILNLK 65
Score = 60.1 bits (144), Expect(2) = 7e-20
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -3
Query: 348 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY 253
+TLSVSTNNSK LDFFR GPSQIAMIRSTSFY
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFY 32
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 99.8 bits (247), Expect = 5e-19
Identities = 48/52 (92%), Positives = 48/52 (92%)
Frame = +3
Query: 75 TFIEYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRSSP 230
TFIEYGFPQNSI IYEIEYGILFTHFKLSI FPPFPAR GNPVF ISIRSSP
Sbjct: 2 TFIEYGFPQNSIGIYEIEYGILFTHFKLSICFPPFPARTGNPVFSISIRSSP 53
>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
gi|223541020|gb|EEF42577.1| conserved hypothetical
protein [Ricinus communis]
Length = 286
Score = 99.8 bits (247), Expect = 5e-19
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +3
Query: 84 EYGFPQNSICIYEIEYGILFTHFKLSIRFPPFPARIGNPVFYISIRSSP*VSEIV 248
EYGF QNSICIYEIEYGILFTHFKLSI PPFPARIGNPVFYISIR SP VS+IV
Sbjct: 232 EYGFLQNSICIYEIEYGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286
>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [Sorghum bicolor]
gi|241935502|gb|EES08647.1| hypothetical protein
SORBIDRAFT_05g021128 [Sorghum bicolor]
Length = 67
Score = 90.9 bits (224), Expect = 2e-16
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = -3
Query: 402 FGTIICPRFNIEIISEVSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYITLFRKPKDS 223
F T+ICPR ++ SLTLSVSTN+SKYLDF R GPSQIAMIRSTS ITLF+K KDS
Sbjct: 1 FRTLICPRSIWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTSLSITLFQKCKDS 60
Query: 222 TVWICKI 202
VWI KI
Sbjct: 61 IVWIWKI 67
>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
Length = 52
Score = 82.8 bits (203), Expect = 6e-14
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = -2
Query: 388 MSKVQY*NHFRGFPYFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHYTISET 233
MSKV FPYFVRVNKQFEIPRLF NRSESNSNDSKHFF HYTISET
Sbjct: 1 MSKVNMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFHYTISET 52
>tpg|DAA43627.1| TPA: hypothetical protein ZEAMMB73_508361 [Zea mays]
Length = 49
Score = 81.3 bits (199), Expect = 2e-13
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = -1
Query: 437 MRQKIFFLKRFDSELLYVQGSILKSFQRFPLLCPCQQTIRNTSTFLEQV 291
MRQKIFFLKRFD ELLYVQG SF+ FPLLC CQQTIRNTSTF EQV
Sbjct: 1 MRQKIFFLKRFDLELLYVQGQYGNSFRGFPLLCQCQQTIRNTSTFSEQV 49
>gb|AFS35523.1| ribosomal protein S12, partial [Fragaria moschata]
Length = 40
Score = 80.1 bits (196), Expect = 4e-13
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = -1
Query: 119 IDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
IDTY ILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP
Sbjct: 1 IDTYIILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 39
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
gi|150251552|ref|YP_001312284.1| hypothetical protein
CYtaCp120 [Cycas taitungensis]
gi|149941571|dbj|BAF64995.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|149941602|dbj|BAF65026.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 45.4 bits (106), Expect(3) = 1e-12
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 256 KRSASNHCYLTRTCSKKVEVF 318
K+S SNHCYLTRTCSKKVEVF
Sbjct: 44 KKSVSNHCYLTRTCSKKVEVF 64
Score = 39.7 bits (91), Expect(3) = 1e-12
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +2
Query: 167 FPSFSC*DWKSCILHIHTVESLGFRNSVM*KEV 265
F FSC DWKS ILHI T++SLG + SV K V
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSV 47
Score = 33.1 bits (74), Expect(3) = 1e-12
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 129 YGILFTHFKLSIRFPPF 179
Y ILFTHFKLSIRF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>ref|YP_009002279.1| ribosomal protein S12 (chloroplast) [Pinguicula ehlersiae]
gi|575882162|emb|CDL78835.1| ribosomal protein S12
(chloroplast) [Pinguicula ehlersiae]
Length = 156
Score = 75.9 bits (185), Expect = 7e-12
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -1
Query: 122 LIDTYRILWKAVFDESRMYGLEGDLSYLSRSTLQYGVKKP 3
+IDTYRIL KAVFDESRMYGL GDLSYLSRSTLQYGVKKP
Sbjct: 116 IIDTYRILRKAVFDESRMYGLGGDLSYLSRSTLQYGVKKP 155
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] gi|58802847|gb|AAW82567.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 75.9 bits (185), Expect = 7e-12
Identities = 39/60 (65%), Positives = 43/60 (71%)
Frame = +1
Query: 301 KKVEVFRIVC*HGQSKGNL*NDFNIEPWTYNSSESNLFRKKIFCLMVACSSPLTKLSLLG 480
KK F + + + NL N NI PWTY+SSESNLFRKK FCLMVACSSPL KLSLLG
Sbjct: 18 KKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCLMVACSSPLPKLSLLG 77
Score = 60.1 bits (144), Expect = 4e-07
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +2
Query: 251 M*KEVLRIIAI*LGPVLKKSRYFELFVDTDKVRETSEMISILNLG 385
M KEVLRIIAI LGPVLKKSRYFELFVDTDK RE +++ N+G
Sbjct: 1 MEKEVLRIIAIGLGPVLKKSRYFELFVDTDKGRE--NLLNYSNIG 43
>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
gi|372863084|gb|AEX99157.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 60
Score = 42.0 bits (97), Expect(3) = 3e-11
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 256 KRSASNHCYLTRTCSKKVEVF 318
K SNHCYLTRTCSKKVEVF
Sbjct: 40 KSVVSNHCYLTRTCSKKVEVF 60
Score = 38.5 bits (88), Expect(3) = 3e-11
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 167 FPSFSC*DWKSCILHIHTVESLGFRNSVM 253
F FSC DWKS ILHI T++SLG + SV+
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSVV 43
Score = 33.1 bits (74), Expect(3) = 3e-11
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 129 YGILFTHFKLSIRFPPF 179
Y ILFTHFKLSIRF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>ref|YP_001152253.1| ORF40x [Pinus koraiensis] gi|145048878|gb|ABP35493.1| ORF40x [Pinus
koraiensis]
Length = 40
Score = 72.0 bits (175), Expect = 1e-10
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -2
Query: 115 IHIEFCGKPYSMKVVCTAWREIFHIFRDPPYNMGSKSQ 2
+ IE CGKPYS KVVCT WREIFH FRDPPYNM SKSQ
Sbjct: 1 MQIESCGKPYSTKVVCTVWREIFHTFRDPPYNMESKSQ 38
>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 56.6 bits (135), Expect(2) = 4e-08
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -3
Query: 348 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFY 253
+TLSVSTNNSK LDFFRT PSQIAMIRST FY
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFY 47
Score = 26.9 bits (58), Expect(2) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2
Query: 250 YTISET*GLDRMDM 209
YTISET GL+RMDM
Sbjct: 47 YTISETQGLNRMDM 60