BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034803
         (276 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301012.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
gb|EXB93905.1| hypothetical protein L484_002061 [Morus notabilis]      88   1e-15
emb|CBI14948.3| unnamed protein product [Vitis vinifera]               85   9e-15
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
gb|EMJ10001.1| hypothetical protein PRUPE_ppa024573mg [Prunus pe...    79   5e-13
ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_002511318.1| pentatricopeptide repeat-containing protein,...    74   3e-11
ref|XP_006476888.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citr...    72   6e-11
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]...    62   1e-07
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...    61   2e-07
ref|XP_006827246.1| hypothetical protein AMTR_s00010p00262030 [A...    60   3e-07
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_006852359.1| hypothetical protein AMTR_s00049p00220350 [A...    59   7e-07
ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, p...    58   1e-06
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe...    58   1e-06
emb|CBI29241.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps...    56   4e-06
ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06

>ref|XP_004301012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Fragaria vesca subsp. vesca]
          Length = 704

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 42/83 (50%), Positives = 55/83 (66%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGAS 75
           N + L+LHRCKT  DL Q+H HL+KT     PS+ ENLLE +AL+LPD++DYA+ +F   
Sbjct: 29  NPKTLILHRCKTTRDLNQVHAHLIKTRLLLNPSITENLLESAALILPDAMDYALSIFRNL 88

Query: 74  PRPTTQAYNILIRAYIRNGCPYD 6
             P T AYNI+IR+      P D
Sbjct: 89  EEPDTLAYNIIIRSLTLKPSPLD 111


>gb|EXB93905.1| hypothetical protein L484_002061 [Morus notabilis]
          Length = 705

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 38/76 (50%), Positives = 54/76 (71%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGAS 75
           N + L+L +CKT  DL QIH HL+KT   H P++ EN+LE +A+LLPD++DYA+ +F   
Sbjct: 28  NPKTLILQQCKTTKDLNQIHAHLLKTSLLHSPAIAENVLESAAILLPDAMDYALSIFRRI 87

Query: 74  PRPTTQAYNILIRAYI 27
            RP + AYN++IR  I
Sbjct: 88  DRPDSSAYNVMIRGLI 103


>emb|CBI14948.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/83 (46%), Positives = 54/83 (65%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGAS 75
           N + L+L +CKT+ DL +IH HL+KT     P V ENLLE +A+LLP S+DYAV +F   
Sbjct: 25  NPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQI 84

Query: 74  PRPTTQAYNILIRAYIRNGCPYD 6
             P + AYNI+IR +     P++
Sbjct: 85  DEPDSPAYNIMIRGFTLKQSPHE 107


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/83 (46%), Positives = 54/83 (65%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGAS 75
           N + L+L +CKT+ DL +IH HL+KT     P V ENLLE +A+LLP S+DYAV +F   
Sbjct: 25  NPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQI 84

Query: 74  PRPTTQAYNILIRAYIRNGCPYD 6
             P + AYNI+IR +     P++
Sbjct: 85  DEPDSPAYNIMIRGFTLKQSPHE 107


>gb|EMJ10001.1| hypothetical protein PRUPE_ppa024573mg [Prunus persica]
          Length = 699

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/74 (47%), Positives = 51/74 (68%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGAS 75
           N + L+L +CKT  DL Q+H HL+KT     P++ ENLLE +A+LLP+++DYA+ +F   
Sbjct: 26  NPKTLILQQCKTTRDLNQVHAHLIKTRLLLNPTITENLLESAAILLPNAMDYALSIFHNL 85

Query: 74  PRPTTQAYNILIRA 33
             P T  YNI+IR+
Sbjct: 86  DEPDTLVYNIMIRS 99


>ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449524140|ref|XP_004169081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 34/73 (46%), Positives = 52/73 (71%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGAS 75
           N ++L+L +CKT  DL+Q+H HL+KT     P + E +LE +ALLLPD++DYA+ +F   
Sbjct: 22  NPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHI 81

Query: 74  PRPTTQAYNILIR 36
            +P + AYN++IR
Sbjct: 82  DKPESSAYNVMIR 94


>ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550433|gb|EEF51920.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/94 (43%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
 Frame = -2

Query: 275 TPLAT----GGNRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPS-VVENLLECSALLLP- 114
           TP++T      N ++L+L +CKT+ DL+Q+H HL+KT   HL S V ENLLE +A++LP 
Sbjct: 15  TPISTVTQFPDNPKSLILQQCKTIKDLKQVHAHLLKT-RRHLDSTVTENLLESAAIILPA 73

Query: 113 DSLDYAVKVFGASPRPTTQAYNILIRAYIRNGCP 12
            +++YA+ +F     P + AYNI+IRA+     P
Sbjct: 74  TTMEYALSIFDNIDGPDSSAYNIMIRAFTLKRSP 107


>ref|XP_006476888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 695

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLP-DSLDYAVKVFGA 78
           N + L++ +CKT  DL Q+H HL+K+     P++ ENLLE +A+L+P  ++DYA+ +F  
Sbjct: 21  NPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHK 80

Query: 77  SPRPTTQAYNILIRAYIRNGCPYD 6
              P + AYNI+IRA+     P +
Sbjct: 81  INEPDSSAYNIMIRAFTLKQSPQE 104


>ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citrus clementina]
           gi|557542184|gb|ESR53162.1| hypothetical protein
           CICLE_v10024603mg [Citrus clementina]
          Length = 695

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLP-DSLDYAVKVFGA 78
           N + L++ +CKT  DL Q+H HL+K+     P++ ENLLE +A+L+P  ++DYA+ +F  
Sbjct: 21  NPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPAATMDYALSIFHK 80

Query: 77  SPRPTTQAYNILIRAYIRNGCPYD 6
              P + AYNI+IRA+     P +
Sbjct: 81  INEPDSSAYNIMIRAFTLKQSPQE 104


>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
           editing factor OTP81 [Arabidopsis thaliana]
          Length = 738

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = -2

Query: 254 NRQALLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGAS 75
           +R   L+ RC ++  L+Q HGH+++TG    P     L   +AL    SL+YA KVF   
Sbjct: 31  SRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90

Query: 74  PRPTTQAYNILIRAY 30
           P+P + A+N LIRAY
Sbjct: 91  PKPNSFAWNTLIRAY 105


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222850518|gb|EEE88065.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 738

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = -2

Query: 242 LLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPT 63
           +L+ +C     L+Q+H H+++TG    P     L    AL  P SLDYA KVF   PRP 
Sbjct: 35  ILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPN 94

Query: 62  TQAYNILIRAYIRNGCP 12
              +N LIRA+  +  P
Sbjct: 95  LYTWNTLIRAFASSPKP 111


>ref|XP_006827246.1| hypothetical protein AMTR_s00010p00262030 [Amborella trichopoda]
           gi|548831675|gb|ERM94483.1| hypothetical protein
           AMTR_s00010p00262030 [Amborella trichopoda]
          Length = 168

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/74 (40%), Positives = 44/74 (59%)
 Frame = -2

Query: 227 CKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPTTQAYN 48
           CKT+ DL++IH H +KTG  + P ++  LL  +A  +PD++DYA  +F   P P    +N
Sbjct: 13  CKTLKDLKRIHAHTIKTGFMYDPLILGKLLLFAATSIPDAIDYAQLLFAQIPSPDPFMWN 72

Query: 47  ILIRAYIRNGCPYD 6
            LIR    N  P+D
Sbjct: 73  TLIRGQADNN-PHD 85


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/71 (40%), Positives = 44/71 (61%)
 Frame = -2

Query: 242 LLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPT 63
           LL+ +C+++  L+QIH ++++ G    P     L+E S+L    SLDYA KVF   P+P 
Sbjct: 40  LLIDKCQSIKQLKQIHAYMLRIGLFSDPFSASKLIEASSLSHFSSLDYAHKVFDEIPQPN 99

Query: 62  TQAYNILIRAY 30
             ++N LIRAY
Sbjct: 100 LFSWNALIRAY 110


>ref|XP_006852359.1| hypothetical protein AMTR_s00049p00220350 [Amborella trichopoda]
           gi|548855963|gb|ERN13826.1| hypothetical protein
           AMTR_s00049p00220350 [Amborella trichopoda]
          Length = 296

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = -2

Query: 239 LLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPTT 60
           LL++CKT+ DL+Q+H  ++KT + H P + EN LE  +  L +   YA  VF  +     
Sbjct: 36  LLNQCKTIRDLQQVHTTIIKTHS-HDPPLFENFLELCSFSLNNGFPYAQLVFSRAENLRA 94

Query: 59  QAYNILIRAYIRNGCP 12
            +YNI+IRAY     P
Sbjct: 95  SSYNIMIRAYTSRRAP 110


>ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
           trichopoda] gi|548860532|gb|ERN18110.1| hypothetical
           protein AMTR_s01859p00006880, partial [Amborella
           trichopoda]
          Length = 190

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -2

Query: 242 LLLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALL-LPDSLDYAVKVFGASPRP 66
           +LL RCK    L QIH HL++ G    P  +  LL  SAL    ++L YA+K+F   P+P
Sbjct: 38  ILLERCKNTKQLPQIHAHLIRLGLIFHPYPLSRLLTISALSNSENALSYALKIFEQIPQP 97

Query: 65  TTQAYNILIRAYIRNGCP 12
               YN +IRA+  +  P
Sbjct: 98  NLYMYNTIIRAHASSRSP 115


>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/76 (36%), Positives = 42/76 (55%)
 Frame = -2

Query: 239 LLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPTT 60
           L+ +C ++  L+Q+H  +++TG    P     L+  SAL    SLDYA +VF   P+P  
Sbjct: 36  LIDQCTSIKQLKQVHAQMLRTGVLFDPYSASKLITASALSSFSSLDYARQVFDQIPQPNV 95

Query: 59  QAYNILIRAYIRNGCP 12
             +N LIRAY  +  P
Sbjct: 96  YTWNTLIRAYASSSDP 111


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/74 (40%), Positives = 40/74 (54%)
 Frame = -2

Query: 227 CKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPTTQAYN 48
           CKT+ DL+Q+H  ++KT     P     LL  SA+     LDYA K+F +  RP   +YN
Sbjct: 21  CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYN 80

Query: 47  ILIRAYIRNGCPYD 6
            LIRA   +  P D
Sbjct: 81  TLIRALSESNDPCD 94


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/74 (40%), Positives = 40/74 (54%)
 Frame = -2

Query: 227 CKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPTTQAYN 48
           CKT+ DL+Q+H  ++KT     P     LL  SA+     LDYA K+F +  RP   +YN
Sbjct: 21  CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYN 80

Query: 47  ILIRAYIRNGCPYD 6
            LIRA   +  P D
Sbjct: 81  TLIRALSESNDPCD 94


>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
           gi|482562457|gb|EOA26647.1| hypothetical protein
           CARUB_v10022711mg [Capsella rubella]
          Length = 739

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/70 (40%), Positives = 39/70 (55%)
 Frame = -2

Query: 239 LLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDYAVKVFGASPRPTT 60
           L+ RC  +  L+Q H H+++TG    P     L   +AL    SL+YA KVF   P+P +
Sbjct: 37  LIDRCSNLRQLKQTHAHMIRTGTFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNS 96

Query: 59  QAYNILIRAY 30
             +N LIRAY
Sbjct: 97  FTWNTLIRAY 106


>ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
           [Vitis vinifera]
          Length = 603

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = -2

Query: 275 TPLATGGNRQAL-LLHRCKTVHDLRQIHGHLVKTGAAHLPSVVENLLECSALLLPDSLDY 99
           TPL     R  L LL  C ++  L +IH H++  G  H PS+ E LL   A+ +  SL Y
Sbjct: 16  TPLMMANARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAY 75

Query: 98  AVKVFGASPRPTTQAYNILIRAYIRNGCP 12
           A  VF     P T A+N +IR + ++  P
Sbjct: 76  AQLVFHRIHNPQTPAWNSMIRGFSQSPSP 104