BLASTX nr result
ID: Zingiber23_contig00033558
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00033558
(214 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group] g... 70 3e-10
ref|XP_004970209.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_004972205.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
ref|XP_006646398.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays] 63 4e-08
gb|EMT16238.1| hypothetical protein F775_17193 [Aegilops tauschii] 63 5e-08
gb|EMT06138.1| hypothetical protein F775_02979 [Aegilops tauschii] 60 2e-07
gb|EMT26966.1| hypothetical protein F775_08991 [Aegilops tauschii] 60 2e-07
ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [S... 60 3e-07
ref|XP_002468230.1| hypothetical protein SORBIDRAFT_01g042160 [S... 60 3e-07
gb|EMT30325.1| hypothetical protein F775_19558 [Aegilops tauschii] 59 7e-07
ref|XP_006853464.1| hypothetical protein AMTR_s00032p00197250 [A... 59 9e-07
ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-05
>ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|20804913|dbj|BAB92593.1| drought-inducible protein
1OS [Oryza sativa Japonica Group]
gi|37179506|gb|AAN05726.2| drought-inducible protein 1OS
[Oryza sativa Indica Group] gi|113534000|dbj|BAF06383.1|
Os01g0785700 [Oryza sativa Japonica Group]
gi|125527974|gb|EAY76088.1| hypothetical protein
OsI_04014 [Oryza sativa Indica Group]
gi|125572269|gb|EAZ13784.1| hypothetical protein
OsJ_03709 [Oryza sativa Japonica Group]
gi|215704731|dbj|BAG94759.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215717015|dbj|BAG95378.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 434
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASSSY-RFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
L ERDPDKL + FIAASS++ RFR RHR+Y+V++ RLA GR D VEAI++ K F +
Sbjct: 67 LLRERDPDKLVSGFIAASSTHPRFRARHRVYDVAVSRLATFGRLDGVEAIIDAQKPF-LE 125
Query: 190 LAHEGF 207
+ EGF
Sbjct: 126 TSKEGF 131
>ref|XP_004970209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Setaria italica]
Length = 465
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
+F ERDP+KL + FIAAS+ S RFR +HR+YEV++ RL GR DAV AIL+ K F +
Sbjct: 71 IFQERDPEKLVSKFIAASAASQRFREKHRVYEVAVARLTSFGRHDAVAAILDSQKPF-LE 129
Query: 190 LAHEGF 207
+ EGF
Sbjct: 130 ASTEGF 135
>ref|XP_004972205.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Setaria italica]
Length = 475
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSF 180
+F ERDPDKL + FIAAS+ S RFR +HR+YEV++ RL GR DA+ AIL+ K F
Sbjct: 101 IFQERDPDKLVSKFIAASAASQRFREKHRVYEVAVSRLKSFGRCDAITAILDSQKPF 157
>ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 457
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
L ERDP+KL + F+AASS S RFR RHR+YEV++ RLA GR D++E +L K F +
Sbjct: 76 LLRERDPEKLVSDFVAASSASARFRDRHRVYEVAVSRLASFGRQDSIETLLGAQKRF-LE 134
Query: 190 LAHEGF 207
+ EGF
Sbjct: 135 TSKEGF 140
>ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Brachypodium distachyon]
Length = 463
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
L ERDP+KL + F+AASS S RFR RHR+YE+++ RLA GR D++E IL K F +
Sbjct: 83 LLRERDPEKLVSDFVAASSASARFRDRHRVYEMAVSRLASLGRQDSIETILGAQKRF-LE 141
Query: 190 LAHEGF 207
+ EGF
Sbjct: 142 TSKEGF 147
>ref|XP_006646398.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Oryza brachyantha]
Length = 453
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASSSY-RFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
L ER+PDKL + FIAASS + RFR RHR+Y V+ RLAK GR D VEAI++ K F +
Sbjct: 79 LLLERNPDKLVSGFIAASSKHPRFRSRHRVYGVAGSRLAKFGRHDGVEAIIDAQKPF-LE 137
Query: 190 LAHEGF 207
+ EGF
Sbjct: 138 TSTEGF 143
>gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]
Length = 453
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +1
Query: 4 LNKLFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSF 180
L +F ERDPDKL + FIA S+ S RFR +HR+Y+V++ RLA GR D + AI++ K F
Sbjct: 57 LQVIFRERDPDKLVSQFIAESTASERFRNKHRVYDVAVARLASFGRHDGIAAIIDSQKPF 116
>gb|EMT16238.1| hypothetical protein F775_17193 [Aegilops tauschii]
Length = 437
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
L +R+PDKL + F+ AS+ S RFR RHR+YEV++ RL GR D +EAI+E K F +
Sbjct: 74 LTRQRNPDKLVSEFVQASTVSSRFRERHRVYEVAVSRLTSFGRQDGIEAIIEAQKPF-LE 132
Query: 190 LAHEGF 207
++EGF
Sbjct: 133 TSNEGF 138
>gb|EMT06138.1| hypothetical protein F775_02979 [Aegilops tauschii]
Length = 517
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
L +RDPDKL + FI AS+ S RFR R+R++EV++ RLA GR D +EAI+E F +
Sbjct: 138 LIRQRDPDKLISGFIQASTVSSRFRDRYRVFEVAVSRLASLGRQDGIEAIIEAQLPF-LE 196
Query: 190 LAHEGF 207
+ EGF
Sbjct: 197 ASAEGF 202
>gb|EMT26966.1| hypothetical protein F775_08991 [Aegilops tauschii]
Length = 449
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 LNKLFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSF 180
L L ERDPDKL + F+ ASS S RFR R Y+V++ RL GR D +EAI+E K F
Sbjct: 82 LKALIRERDPDKLVSKFVEASSASSRFRDGRRAYDVAVSRLTSLGRKDGIEAIIEAQKPF 141
Query: 181 SSDLAHEGF 207
+ + EGF
Sbjct: 142 -LETSSEGF 149
>ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
gi|241928434|gb|EES01579.1| hypothetical protein
SORBIDRAFT_03g036700 [Sorghum bicolor]
Length = 429
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 22 ERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSF 180
ERDPDKL + FIAAS+ S RFR R+YEV++ RLA GR DAV A+L+ K F
Sbjct: 71 ERDPDKLVSQFIAASTASPRFRDNRRVYEVAVSRLASFGRRDAVAALLDSQKPF 124
>ref|XP_002468230.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
gi|241922084|gb|EER95228.1| hypothetical protein
SORBIDRAFT_01g042160 [Sorghum bicolor]
Length = 396
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSF 180
+F ER+PDKL + FIA S+ S FR HR+YEV++ RLA GR DA+ AI++ K F
Sbjct: 7 IFRERNPDKLVSRFIAKSTASESFRNEHRVYEVAVARLASFGRHDAIAAIIDSQKPF 63
>gb|EMT30325.1| hypothetical protein F775_19558 [Aegilops tauschii]
Length = 490
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASS-SYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSD 189
L +RDPD L + F+ AS+ S RFR HR+Y+V++ RL GR D +EAI+E K F +
Sbjct: 109 LIRQRDPDTLVSEFVQASTVSSRFREWHRVYDVAVSRLTSFGRQDGIEAIIEAQKPF-LE 167
Query: 190 LAHEGF 207
++EGF
Sbjct: 168 TSNEGF 173
>ref|XP_006853464.1| hypothetical protein AMTR_s00032p00197250 [Amborella trichopoda]
gi|548857117|gb|ERN14931.1| hypothetical protein
AMTR_s00032p00197250 [Amborella trichopoda]
Length = 404
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +1
Query: 4 LNKLFNERDPDKLTAAFIAASSSYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFS 183
L LF E D D L F AS YRFRC H IY ++ RLAK + ++E ILE K +
Sbjct: 51 LADLFQENDLDTLVEKFKKASERYRFRCTHNIYGYTVMRLAKANKKSSIEEILEEQKKYK 110
Query: 184 SDLAHEGF 207
+ A EGF
Sbjct: 111 A-TATEGF 117
>ref|XP_004293582.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 378
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 13 LFNERDPDKLTAAFIAASSSYRFRCRHRIYEVSIRRLAKCGRPDAVEAILEHHKSFSSDL 192
L+ ER+ +L F +S YRFR + IYE ++RRLA R +A+E +LEH K + D
Sbjct: 29 LYRERNLKRLVHKFKESSEIYRFRTKSPIYEETVRRLATAKRFNAIEEMLEHQKKY-PDF 87
Query: 193 AHEGFGI 213
A EGF +
Sbjct: 88 ADEGFAV 94