BLASTX nr result
ID: Zingiber23_contig00033365
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00033365
(251 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004494443.1| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus... 100 3e-19
ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis] 93 3e-17
ref|XP_006394465.1| hypothetical protein EUTSA_v10005291mg [Eutr... 92 9e-17
ref|XP_004289549.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t... 87 2e-15
ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_006301825.1| hypothetical protein CARUB_v10022294mg, part... 72 1e-10
ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus pe... 72 1e-10
ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
ref|XP_006391913.1| hypothetical protein EUTSA_v10023975mg, part... 70 2e-10
gb|EOX97561.1| Mitochondrial editing factor 9 isoform 1 [Theobro... 70 4e-10
ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis tha... 70 4e-10
ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arab... 70 4e-10
gb|EOY15113.1| Pentatricopeptide repeat (PPR) superfamily protei... 69 5e-10
gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis] 68 1e-09
ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [A... 68 1e-09
>ref|XP_004494443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cicer arietinum]
Length = 527
Score = 102 bits (255), Expect = 4e-20
Identities = 43/82 (52%), Positives = 64/82 (78%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D+ +WGA L ACGLHSNLE G A + ++RL+ +HP+ YSM+ K+ GE+G+W+S
Sbjct: 446 MPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESNHPVSYSMLSKIQGEKGIWSSV 505
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
+EL+ KM+ + +KQ+A+SW+E
Sbjct: 506 NELREKMKERGIKKQKAISWLE 527
>gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus vulgaris]
Length = 561
Score = 100 bits (248), Expect = 3e-19
Identities = 40/81 (49%), Positives = 63/81 (77%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D+ +WGA L ACG+HSNLE G A + +++L+ +HP+ YS++ K+ GE+G+W+S
Sbjct: 480 MPFEPDVVLWGALLAACGMHSNLELGEYAAERIRKLESNHPVSYSILSKIQGEKGIWSSV 539
Query: 66 DELKGKMQCKRSRKQRALSWI 4
+EL+ M+ K+ RKQ+A+SW+
Sbjct: 540 NELRDLMKVKQIRKQKAISWV 560
>ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 531
Score = 94.4 bits (233), Expect = 1e-17
Identities = 39/79 (49%), Positives = 61/79 (77%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D+ +WGA L ACGLHSNLE G+ A + +++L+ DHP+ YS++ K+ GE+G+W+S
Sbjct: 449 MPFEPDVVLWGALLAACGLHSNLEIGVYAAERIRKLESDHPVSYSILSKIQGEKGIWSSV 508
Query: 66 DELKGKMQCKRSRKQRALS 10
+EL+ M+ ++ +KQ+A S
Sbjct: 509 NELRDMMKERQVKKQKASS 527
>gb|EXB55980.1| hypothetical protein L484_018766 [Morus notabilis]
Length = 522
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MP E DI VWGA L ACGLHS+LE G A + M++L+ +H ++YSM+ K++GE+G WT
Sbjct: 435 MPVEPDIVVWGALLAACGLHSSLEVGEFAAEGMKKLKNEHRVVYSMLSKIHGEKGSWTIA 494
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
EL+ M+ KR KQ A SW+E
Sbjct: 495 IELREMMKRKRVWKQNAGSWVE 516
>ref|XP_006394465.1| hypothetical protein EUTSA_v10005291mg [Eutrema salsugineum]
gi|557091104|gb|ESQ31751.1| hypothetical protein
EUTSA_v10005291mg [Eutrema salsugineum]
Length = 514
Score = 91.7 bits (226), Expect = 9e-17
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D+ +WGA L ACGLHS LE G A + + RL+++HP Y ++ +V+GE+G WTS
Sbjct: 430 MPFEPDVVIWGALLRACGLHSCLELGEVAAEGISRLRREHPAAYDVLCRVHGEKGDWTSV 489
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
EL+ M+ +++KQ A SWIE
Sbjct: 490 MELRRLMKKTKAKKQDASSWIE 511
>ref|XP_004289549.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 521
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MP++ D+ VW A L ACGLHS+LE G A K + +L+ DHP I+S + +++GERG+W S
Sbjct: 434 MPYQPDVVVWCALLGACGLHSSLELGKFAAKELDKLESDHPAIFSTLSRIHGERGVWNSV 493
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
+L+ M+ K +KQ A SW+E
Sbjct: 494 LKLRKTMKEKGVQKQNAGSWVE 515
>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 607
Score = 87.0 bits (214), Expect = 2e-15
Identities = 37/75 (49%), Positives = 55/75 (73%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D+ +WGA L ACGLHSNLE G A + ++RL+ HP+ YS++ K+ GE+G+W+S
Sbjct: 431 MPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSV 490
Query: 66 DELKGKMQCKRSRKQ 22
+EL+ M+ + +KQ
Sbjct: 491 NELRDTMKERGIKKQ 505
>ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 529
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPF+ D+ VWGA L ACGLHS LE G A + L+ DHP +YS++ K+YG++G+ +
Sbjct: 443 MPFKPDVVVWGALLGACGLHSCLELGEIAANGIYTLEHDHPAVYSVLSKIYGDKGVCSDI 502
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
L M+ R+ KQ+A SWIE
Sbjct: 503 TGLDKLMKKWRATKQKAGSWIE 524
>ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum lycopersicum]
Length = 630
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPF+ D+ VWGA L ACGLHS LE G A + L+ DHP +YS++ K+YG++G+ +
Sbjct: 443 MPFKPDVVVWGALLGACGLHSCLELGEIAANGIYTLEHDHPAVYSVLSKIYGDKGVCSDI 502
Query: 66 DELKGKMQCKRSRKQRA 16
L M+ R+ KQ+A
Sbjct: 503 TGLDKLMKKWRATKQKA 519
>ref|XP_006301825.1| hypothetical protein CARUB_v10022294mg, partial [Capsella rubella]
gi|482570535|gb|EOA34723.1| hypothetical protein
CARUB_v10022294mg, partial [Capsella rubella]
Length = 665
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D +WGA L AC +++N+ A +AM RL+ + Y ++ +Y E GLW
Sbjct: 581 MPFEPDKTIWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYAEMGLWDEA 640
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
+++ KM+ KR +K+R SW++
Sbjct: 641 SQVRMKMEGKRIKKERGSSWVD 662
>ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Fragaria vesca subsp. vesca]
Length = 755
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = -3
Query: 249 RMPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTS 70
+MPFE D VWGA L++C +H+N+ G S K + L+ +P Y ++ +Y +G+WT
Sbjct: 545 KMPFEPDACVWGALLSSCRVHNNVTLGESTAKKLFNLEPGNPGNYILLSNIYASKGMWTE 604
Query: 69 FDELKGKMQCKRSRKQRALSWIE 1
D ++ M+ RK SWIE
Sbjct: 605 VDRVRDTMKSLGLRKNPGCSWIE 627
>gb|EMJ28402.1| hypothetical protein PRUPE_ppa019251mg [Prunus persica]
Length = 654
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = -3
Query: 249 RMPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTS 70
+MPFE D VWGA L++C +HSN+ G K + L+ +P Y ++ +Y +G+W+
Sbjct: 444 QMPFEPDACVWGALLSSCRVHSNVTLGKYVAKKLFNLEPKNPGNYILLSNIYASKGMWSE 503
Query: 69 FDELKGKMQCKRSRKQRALSWIE 1
D+++ KM+ RK SWIE
Sbjct: 504 VDKVRDKMKSLGLRKNPGCSWIE 526
>ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1135
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D VWGA L ACG H+N+E G A + + +L+ D+P Y ++L +Y G+
Sbjct: 1009 MPFEPDSLVWGALLGACGKHANVEMGREAAERLFKLEPDNPRNYMLLLNIYLRHGMLEEA 1068
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
DE++ M RK+ SWI+
Sbjct: 1069 DEVRRLMGINGVRKESGCSWID 1090
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D VWGA L ACG H+N+E G + + +L+ D+P Y ++ +Y G+
Sbjct: 563 MPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEA 622
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
DE++ M RK+ SWI+
Sbjct: 623 DEVRRLMGINGVRKESGCSWID 644
>ref|XP_006391913.1| hypothetical protein EUTSA_v10023975mg, partial [Eutrema
salsugineum] gi|557088419|gb|ESQ29199.1| hypothetical
protein EUTSA_v10023975mg, partial [Eutrema salsugineum]
Length = 586
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D VWGA L AC ++SN+ A +A+ RL+ + Y ++ ++ + GLW
Sbjct: 507 MPFEPDRTVWGALLDACRIYSNVRLAHVAAEALSRLEPESSTPYVLLYNMFADMGLWEEA 566
Query: 66 DELKGKMQCKRSRKQRALSW 7
+++ KM+ KR +K+RA SW
Sbjct: 567 SQVRMKMESKRIKKERASSW 586
>gb|EOX97561.1| Mitochondrial editing factor 9 isoform 1 [Theobroma cacao]
gi|508705666|gb|EOX97562.1| Mitochondrial editing factor
9 isoform 1 [Theobroma cacao]
Length = 657
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D AVWGA L AC +H+N+E A +A+ L+ + Y ++ +Y ++G W
Sbjct: 572 MPFEPDKAVWGALLGACRVHNNVELARVAAEALMSLEPESSAPYILLYNMYADKGQWDDA 631
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
E++ M+ + RKQ A SWI+
Sbjct: 632 VEVREMMERNKVRKQAAYSWID 653
>ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product
[Arabidopsis thaliana] gi|332195821|gb|AEE33942.1|
mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D VWGA L AC +++N+ A +AM RL+ + Y ++ +Y + GLW
Sbjct: 572 MPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEA 631
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
+++ M+ KR +K+R SW++
Sbjct: 632 SQVRMNMESKRIKKERGSSWVD 653
>ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata] gi|297332324|gb|EFH62742.1| hypothetical protein
ARALYDRAFT_338156 [Arabidopsis lyrata subsp. lyrata]
Length = 1243
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D VWGA L AC +++N+ A +AM RL+ + Y ++ +Y + GLW
Sbjct: 917 MPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEA 976
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
+++ M+ KR +K+R SW++
Sbjct: 977 SQVRMNMESKRIKKERGSSWVD 998
>gb|EOY15113.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 758
Score = 69.3 bits (168), Expect = 5e-10
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -3
Query: 249 RMPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTS 70
+MPFE D VWGA L++C LH+N+ G A + + +L+ +P Y ++ +Y +G+W
Sbjct: 548 QMPFEPDACVWGALLSSCRLHNNISLGEIAAQNLFKLEPSNPGNYILLSNIYASKGMWDE 607
Query: 69 FDELKGKMQCKRSRKQRALSWIE 1
D ++ M+ + +K SWIE
Sbjct: 608 VDAVRDVMRSRGMKKNPGCSWIE 630
>gb|EXB68664.1| hypothetical protein L484_024678 [Morus notabilis]
Length = 728
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = -3
Query: 249 RMPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTS 70
+MP E D VWG+ L++C +H+N+ G A + + L+ +P Y ++ +YG +G+W+
Sbjct: 518 KMPMEPDACVWGSLLSSCRVHNNVSLGEVAAEKLFELEPRNPGNYVILSNIYGSKGMWSQ 577
Query: 69 FDELKGKMQCKRSRKQRALSWIE 1
D ++ M K RK SWIE
Sbjct: 578 VDRVRDMMNQKGLRKNPGCSWIE 600
>ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [Amborella trichopoda]
gi|548832639|gb|ERM95420.1| hypothetical protein
AMTR_s00008p00241920 [Amborella trichopoda]
Length = 620
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = -3
Query: 246 MPFEADIAVWGAFLTACGLHSNLEHGLSAVKAMQRLQKDHPIIYSMMLKVYGERGLWTSF 67
MPFE D AVWGA L AC +HSN+E G A + + LQ +P Y ++ +Y G+W
Sbjct: 485 MPFEPDAAVWGALLGACRVHSNVELGELAYEKLVDLQPQNPSPYILLSNMYAAMGMWREV 544
Query: 66 DELKGKMQCKRSRKQRALSWIE 1
L+ M+ + +KQ SW+E
Sbjct: 545 TRLRFLMRERGLKKQPGYSWME 566