BLASTX nr result

ID: Zingiber23_contig00033059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00033059
         (2029 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   495   e-137
ref|NP_001045722.1| Os02g0121900 [Oryza sativa Japonica Group] g...   491   e-136
ref|XP_002451419.1| hypothetical protein SORBIDRAFT_04g001815 [S...   490   e-135
ref|XP_004952080.1| PREDICTED: pentatricopeptide repeat-containi...   477   e-132
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   472   e-130
ref|NP_001169582.1| hypothetical protein [Zea mays] gi|224030203...   471   e-130
gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [...   468   e-129
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   465   e-128
ref|XP_002326829.1| predicted protein [Populus trichocarpa]           465   e-128
ref|XP_003573599.1| PREDICTED: pentatricopeptide repeat-containi...   464   e-128
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   463   e-127
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     459   e-126
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   459   e-126
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   458   e-126
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              455   e-125
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   454   e-125
ref|XP_006648252.1| PREDICTED: pentatricopeptide repeat-containi...   454   e-125
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   451   e-124
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...   451   e-124
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   448   e-123

>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  495 bits (1275), Expect = e-137
 Identities = 272/562 (48%), Positives = 362/562 (64%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIP----SPSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + ++++F+ +     SPSV ++NSLL              LF+EM 
Sbjct: 168  FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                V PD  TFN LIRGFC+NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+V
Sbjct: 228  DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
            +IAH ++ GM + +P+ +PNVV+YTTLIRGYC K            M+S GL+PN ITYN
Sbjct: 288  KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLIQGLC+++++D +KE+L+ G  GD    F PDTCT NTLI AHC MG   +A  VFEK
Sbjct: 348  TLIQGLCEAQKLDKIKEILE-GMVGDGG--FIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M+E++V  DS TY +L+R LC+ G+F RAEE  DEL +KE+L     C PLVA YNPM  
Sbjct: 405  MSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFE 464

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            YLC +GKT+KA  V +QL+  +   D  ++KT+I                V M +RD VP
Sbjct: 465  YLCSNGKTKKAERVFRQLM-KRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVP 523

Query: 1120 DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            DAE Y ++I+G L++     A + L KM  S H P+T  FH +L  +V+K     ES  L
Sbjct: 524  DAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKG-CAHESASL 582

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            V +ML+R +R NIDLST  V  L++S   D+AF  + LLYE GY +KMEELV  LC+SRK
Sbjct: 583  VKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRK 642

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             LEA++MLLFSLEK + +  D+ +TVI+ LC   K  EAF L+YE+ E+G      +C  
Sbjct: 643  LLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQH-RLTCQE 701

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             L+++LE   ++NEAKFV+K++
Sbjct: 702  DLRISLEAEGRLNEAKFVSKKM 723


>ref|NP_001045722.1| Os02g0121900 [Oryza sativa Japonica Group]
            gi|41052752|dbj|BAD07608.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|113535253|dbj|BAF07636.1| Os02g0121900 [Oryza
            sativa Japonica Group] gi|125580614|gb|EAZ21545.1|
            hypothetical protein OsJ_05173 [Oryza sativa Japonica
            Group] gi|218189948|gb|EEC72375.1| hypothetical protein
            OsI_05641 [Oryza sativa Indica Group]
          Length = 624

 Score =  491 bits (1263), Expect = e-136
 Identities = 267/575 (46%), Positives = 360/575 (62%), Gaps = 14/575 (2%)
 Frame = +1

Query: 49   NSFNALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMF-G 225
            ++ NALLR LA AG +R A  LFR IPSP+  S+NSLL            S LF  +   
Sbjct: 50   HALNALLRALAAAGRVRAAAALFRRIPSPTPHSFNSLLAALLRRGRRRAASALFAALLRS 109

Query: 226  RAVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSR-----HGCAPDVVTYNTLLDGLCRA 390
             +  PD  T NTL+ G    S  H +      + R     +  APD ++YN+LL  LCRA
Sbjct: 110  PSASPDAATLNTLLHGLSTASP-HPSTPALLRLFRFLPDTYAFAPDAISYNSLLSALCRA 168

Query: 391  GEVRIAHKLLNGMRRNTPD----TAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQ 558
            G+V  A KL +GMR    +      PNV++YTT+I+ YC+K            M++ G+ 
Sbjct: 169  GDVLTARKLFDGMRVGGEEGRGAVFPNVITYTTMIKAYCAKRLVNEALAIFKLMVADGVA 228

Query: 559  PNSITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSD 738
            PN ITYNT++QG C + RM+LVKE+L+          F PDTCTFNTL+A HC  G   D
Sbjct: 229  PNRITYNTMVQGFCDAGRMELVKEVLEMDS-------FRPDTCTFNTLVAVHCREGRIED 281

Query: 739  ALKVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVA 918
            A+KVF +M E++V  DS +Y ++IR LCENGEFG+AEEL+DELL+KEVL++RG C PL+A
Sbjct: 282  AMKVFNQMVELRVRRDSASYSMVIRVLCENGEFGQAEELVDELLEKEVLKKRGGCTPLIA 341

Query: 919  TYNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSM 1098
             YNP+  YLC  GKT+KAR++  QLLD ++K D+ AFKT+I                +SM
Sbjct: 342  AYNPVFVYLCEHGKTKKARMLFGQLLDRRSKVDVPAFKTLILGHCREGDFEEGYALLLSM 401

Query: 1099 SKRDLVPDAEIYQILINGFLQQ-NIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKY 1275
             KRDLVPD E Y  +I GF Q+  + FAWE L +M NS  RPST  FH VL+G++ K   
Sbjct: 402  LKRDLVPDDECYIAVIEGFSQRGRMKFAWEALHRMLNSGLRPSTSTFHSVLLGLLNKDGC 461

Query: 1276 TKESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVV 1455
             KE+ DL+ +ML+R +R N+DLST +V+ LFR++ NDRA+KIV  LY+ GY +KME+L+ 
Sbjct: 462  AKEAADLIEIMLERKIRQNVDLSTNLVDTLFRNNLNDRAYKIVTSLYDHGYYIKMEKLIA 521

Query: 1456 SLCKSRKFLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCAS 1635
            +LC+ +KF+EA +  LFSLEKS+     + + V++ LC  G+A EAF LFYE+ E   A 
Sbjct: 522  NLCEEKKFIEAADFTLFSLEKSQNFGVAIPSMVLDGLCMTGRASEAFRLFYELIENRSAL 581

Query: 1636 INSSC---LCALKVALENGEKMNEAKFVAKQINRA 1731
             + +    L AL  ALE   KM EA F+A+Q+ RA
Sbjct: 582  ASVAAPRSLVALHHALEESGKMKEADFIARQMRRA 616


>ref|XP_002451419.1| hypothetical protein SORBIDRAFT_04g001815 [Sorghum bicolor]
            gi|241931250|gb|EES04395.1| hypothetical protein
            SORBIDRAFT_04g001815 [Sorghum bicolor]
          Length = 613

 Score =  490 bits (1261), Expect = e-135
 Identities = 263/577 (45%), Positives = 362/577 (62%), Gaps = 12/577 (2%)
 Frame = +1

Query: 49   NSFNALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMFGR 228
            ++ NALLR LA AG +R A  LFR IP P+  S+NSLL            S L       
Sbjct: 41   HALNALLRALAAAGRVRAATSLFRSIPVPTPHSFNSLLAALLRRGRRRAASALLAAFLRS 100

Query: 229  A-VRPDVCTFNTLIRGFCLNSMVHEAFHVFKEM----SRHGCAPDVVTYNTLLDGLCRAG 393
                PDV T NTLI G    S    A  +FK        +  APDV+TYN++L  LCRAG
Sbjct: 101  PDASPDVATLNTLIHGLSTASPRPSAPTLFKLFLFLPETYAFAPDVITYNSMLSALCRAG 160

Query: 394  EVRIAHKLLNGMRRN----TPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQP 561
            ++  AHKL +GMR +      D  PNVV+YTT+IR  C+K            M++ G+ P
Sbjct: 161  DLATAHKLFDGMRVSGQGGKADAFPNVVTYTTMIRACCAKRLADEALSLFKMMVADGVPP 220

Query: 562  NSITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDA 741
            N ITYNT++QG C++ RM+LVKE+            F+PDTCTFNTL+AAHC  G   DA
Sbjct: 221  NRITYNTMVQGFCEAGRMELVKEVFGMDS-------FKPDTCTFNTLMAAHCREGRIEDA 273

Query: 742  LKVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVAT 921
            +KVF++M E++V  DS +Y ++IR LCENGEFGR EE +D+LL+KEVL+++G C+PL+A 
Sbjct: 274  MKVFDQMMELRVRRDSASYSMVIRALCENGEFGRVEEFVDDLLEKEVLKKKGGCVPLIAA 333

Query: 922  YNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMS 1101
            Y+P+L Y C +GK +KAR++  QLLD ++K D  AFKT+I                +SM 
Sbjct: 334  YSPVLKYFCENGKAKKARVLFGQLLDRRSKVDFLAFKTLILGHCKEGDFEEGYQLVLSML 393

Query: 1102 KRDLVPDAEIYQILINGFLQQ-NIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYT 1278
            KRDL PD E Y  +I+GF+Q+  +  AWE L +M NS  +PST  FH VL+G++KK    
Sbjct: 394  KRDLRPDTECYIAVIDGFMQKGRMKSAWEALHRMLNSGLQPSTSTFHSVLLGLLKKDGCA 453

Query: 1279 KESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVS 1458
            KE+GDL+ +ML+R +R N+DLST ++  LF+SD NDRA+KI K LY+ GY +KME+++ +
Sbjct: 454  KEAGDLIEIMLERKIRQNVDLSTNLIGVLFKSDLNDRAYKITKRLYDNGYYIKMEKVIAT 513

Query: 1459 LCKSRKFLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASI 1638
            LC+ +KF++A E  LFSL+K  ++  +V++ V++ LCS G+  EAF LFYE+ E    S 
Sbjct: 514  LCQDKKFIDAAEFTLFSLQKRHELGVEVHSLVLDGLCSDGRTSEAFQLFYELMENRSTSA 573

Query: 1639 NSS--CLCALKVALENGEKMNEAKFVAKQINRAVDEV 1743
             ++   L  L  ALE   K+ EA FVAKQ+ RA   +
Sbjct: 574  VAAPRSLVLLHHALEEAGKVKEADFVAKQMRRATARI 610


>ref|XP_004952080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Setaria italica]
          Length = 620

 Score =  477 bits (1227), Expect = e-132
 Identities = 257/577 (44%), Positives = 363/577 (62%), Gaps = 12/577 (2%)
 Frame = +1

Query: 49   NSFNALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMFGR 228
            ++ NALLR LA AG +R A  LFR IP+P+  S+NSLL            S L       
Sbjct: 47   HALNALLRALAAAGRVRAATSLFRSIPAPTPHSFNSLLAALLRRGRRRAASALLAAFLRS 106

Query: 229  A-VRPDVCTFNTLIRGFCLNS---MVHEAFHVFKEMSR-HGCAPDVVTYNTLLDGLCRAG 393
                PDV T NTL+ G    S     H    +F+ +   +  APD +TYN+LL  LCR G
Sbjct: 107  PDASPDVTTLNTLLHGLSTASPRPSAHTLLKLFRFLPETYAFAPDAITYNSLLSALCRGG 166

Query: 394  EVRIAHKLLNGMRRNTPDTAP----NVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQP 561
            ++  A KL +GM  +  D+      NVV+YTT+IR YC+K            M++ G+ P
Sbjct: 167  DLATARKLFDGMHVSEEDSKSGAFANVVTYTTMIRAYCAKGLADEALALFKVMVANGVPP 226

Query: 562  NSITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDA 741
            N +T+NT++QG C++ RM+LVKE+ +          F+PDTCTFNTL+AAH + G F DA
Sbjct: 227  NRVTFNTMVQGFCEAGRMELVKEVFEMES-------FKPDTCTFNTLMAAHYSEGRFEDA 279

Query: 742  LKVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVAT 921
            +KVF++MTE+ V  DS +Y ++IR LCE+ EFGRAEEL+DE+L++E+L++RG  +PL+A 
Sbjct: 280  MKVFDQMTELHVRRDSASYSMVIRALCESREFGRAEELVDEILEEELLKKRGGSVPLIAA 339

Query: 922  YNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMS 1101
            YNP+  Y C +GK +KARI+  QLLD ++K D +AFKT+I                +SM 
Sbjct: 340  YNPVFVYFCENGKAKKARILFGQLLDRRSKVDFQAFKTLILGHCKEGNFEEAYELVLSML 399

Query: 1102 KRDLVPDAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYT 1278
            KRDL+PD E Y  +I+GF+Q+  +  AWE L +M NS  RPST  FH VL+G++KK    
Sbjct: 400  KRDLIPDNECYIAVIDGFMQKGRMKSAWETLHRMLNSGLRPSTSTFHSVLLGLLKKDGCA 459

Query: 1279 KESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVS 1458
            KE+ DL+ +ML+R +R N+DLST +++ LF+SD NDRA+KI K LY+ GY +KME+L+ +
Sbjct: 460  KEAADLIEIMLERKIRQNVDLSTNLIDVLFKSDLNDRAYKITKRLYDNGYYIKMEKLIET 519

Query: 1459 LCKSRKFLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASI 1638
            LC+ +KF++A E  LFSL+K  ++   V++ V++ L   GKA EAF LFYE+ E G  S 
Sbjct: 520  LCEDKKFIDAAEFTLFSLQKHHELGVAVHSLVLDGLSMDGKASEAFRLFYELIENGSTSA 579

Query: 1639 NSS--CLCALKVALENGEKMNEAKFVAKQINRAVDEV 1743
             ++   +  L  ALE   KM EA FV KQ++RA   +
Sbjct: 580  VAAPRSVILLHHALEEAGKMKEADFVGKQMSRATARI 616


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  472 bits (1215), Expect = e-130
 Identities = 259/533 (48%), Positives = 339/533 (63%), Gaps = 2/533 (0%)
 Frame = +1

Query: 130  SPSVFSYNSLLXXXXXXXXXXXXSDLFEEMFGR-AVRPDVCTFNTLIRGFCLNSMVHEAF 306
            SPSV ++NSLL              LF+EM     V PD  TFN LIRGFC+NSMV E F
Sbjct: 268  SPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGF 327

Query: 307  HVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTAPNVVSYTTLIR 486
              FKEMSR  C PDVVTYNTL+DGLCRAG+V+IAH ++ GM + +P+ +PNVV+YTTLIR
Sbjct: 328  WFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIR 387

Query: 487  GYCSKXXXXXXXXXXXXMISVGLQPNSITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDL 666
            GYC K            M+S GL+PN ITYNTLIQGLC+++++D +KE+L+ G  GD   
Sbjct: 388  GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILE-GMVGDGG- 445

Query: 667  VFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRA 846
             F PDTCT NTLI AHC MG   +A  VFEKM+E++V  DS TY +L+R LC+ G+F RA
Sbjct: 446  -FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 504

Query: 847  EELIDELLKKEVLRRRGRCLPLVATYNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEA 1026
            EE  DEL +KE+L     C PLVA YNPM  YLC +GKT+KA  V +QL+  +   D  +
Sbjct: 505  EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLM-KRGTQDPPS 563

Query: 1027 FKTVIXXXXXXXXXXXXXXXXVSMSKRDLVPDAEIYQILINGFLQQNID-FAWEVLRKMF 1203
            +KT+I                V M +RD VPDAE Y ++I+G L++     A + L KM 
Sbjct: 564  YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 623

Query: 1204 NSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSN 1383
             S H P+T  FH +L  +V+K               +R +R NIDLST  V  L++S   
Sbjct: 624  KSSHLPTTAIFHSILAALVEK---------------ERRIRQNIDLSTHTVRLLYKSGLQ 668

Query: 1384 DRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREMLLFSLEKSEKISNDVYTTVINK 1563
            D+AF  + LLYE GY +KMEELV  LC+SRK LEA++MLLFSLEK + +  D+ +TVI+ 
Sbjct: 669  DKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISG 728

Query: 1564 LCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNEAKFVAKQI 1722
            LC   K  EAF L+YE+ E+G      +C   L+++LE   ++NEAKFV+K++
Sbjct: 729  LCKAHKVSEAFALYYELVEKGMQH-RLTCQEDLRISLEAEGRLNEAKFVSKKM 780



 Score = 62.8 bits (151), Expect = 6e-07
 Identities = 67/316 (21%), Positives = 135/316 (42%), Gaps = 18/316 (5%)
 Frame = +1

Query: 733  SDALKVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPL 912
            ++++KVF+ M E+ V    VT+  L+  + + G    A++L DE+L    +       P 
Sbjct: 253  AESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGV------TPD 306

Query: 913  VATYNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXV 1092
              T+N ++   C +   ++     +++   K   D+  + T++                 
Sbjct: 307  TYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVK 366

Query: 1093 SMSKR--DLVPDAEIYQILINGF-LQQNIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVK 1263
             M K+  +L P+   Y  LI G+ ++Q++  A  +L +M +   +P+   ++ ++ G+ +
Sbjct: 367  GMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCE 426

Query: 1264 KSKYTKESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKME 1443
              K  K    L  ++      P+      +++        + AF +    +EK   L+++
Sbjct: 427  AQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSV----FEKMSELRVQ 482

Query: 1444 E-------LVVSLCKSRKFLEAREMLLFSLEKSEKISNDV--------YTTVINKLCSKG 1578
                    LV SLC+   F  A E     L + E + +DV        Y  +   LCS G
Sbjct: 483  PDSATYSVLVRSLCQRGDFRRAEE-FFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNG 541

Query: 1579 KALEAFDLFYEIKERG 1626
            K  +A  +F ++ +RG
Sbjct: 542  KTKKAERVFRQLMKRG 557


>ref|NP_001169582.1| hypothetical protein [Zea mays] gi|224030203|gb|ACN34177.1| unknown
            [Zea mays] gi|413935329|gb|AFW69880.1| hypothetical
            protein ZEAMMB73_684747 [Zea mays]
          Length = 622

 Score =  471 bits (1212), Expect = e-130
 Identities = 259/573 (45%), Positives = 354/573 (61%), Gaps = 12/573 (2%)
 Frame = +1

Query: 49   NSFNALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMFG- 225
            ++ NALLR LA AG +R A  LFR IP+P+  S+NS L            S L       
Sbjct: 49   HALNALLRALAAAGRVRAAASLFRAIPAPTPHSFNSFLAALLRRGRRRAASALLAAFLRC 108

Query: 226  RAVRPDVCTFNTLIRGFCLNSMVHEA---FHVFKEMSR-HGCAPDVVTYNTLLDGLCRAG 393
                PDV T NTLI G    S    +     +F+ +   +  APD +TYN++L  LCRAG
Sbjct: 109  PGASPDVATLNTLIHGLSTASPRPSSPALLRLFRFLPEAYAFAPDAITYNSMLAALCRAG 168

Query: 394  EVRIAHKLLNGMRRNTPD----TAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQP 561
            ++  A +L +GMR           PNVV+YTT+IR  C+             M++ G++P
Sbjct: 169  DLATARRLFDGMRAGEQGGEAGAFPNVVAYTTMIRACCASRLADEALSLFKMMLADGVRP 228

Query: 562  NSITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDA 741
            N ITYNT++QG C++ RM+LVKE+            F+PDTCTFNTL+AAHC  G   DA
Sbjct: 229  NRITYNTMVQGFCQAGRMELVKEVFGMDS-------FKPDTCTFNTLMAAHCREGRIQDA 281

Query: 742  LKVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVAT 921
             KVF++M E++V  DS +Y I+ R LCENGEFGRAEEL+D LL+KEVL++RG C+PL+A+
Sbjct: 282  KKVFDQMMELRVRRDSASYSIVTRALCENGEFGRAEELVDSLLEKEVLKKRGGCVPLIAS 341

Query: 922  YNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMS 1101
            YNP+  YLC +GK +KAR++  QLLD ++K D  AFKT+I                +SM 
Sbjct: 342  YNPVFKYLCENGKAKKARLLFGQLLDIRSKVDFLAFKTLILGHCKEGDFEEGYELVLSML 401

Query: 1102 KRDLVPDAEIYQILINGFLQQ-NIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYT 1278
            KRDL+PD+E Y  +I+GF+Q+  +  AWE L +M NS  RPST  FH VL+G++KK    
Sbjct: 402  KRDLMPDSECYIAVIDGFMQKGRMKSAWEALHRMLNSGLRPSTSTFHSVLLGLLKKDGCA 461

Query: 1279 KESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVS 1458
            KE+ DL+ +ML+R +R N+DLST ++  LF+SD NDRA+KI K LY+ GY +KME+L+ +
Sbjct: 462  KEAADLIEIMLERKIRQNVDLSTNLIGVLFKSDLNDRAYKITKHLYDNGYYIKMEKLIAT 521

Query: 1459 LCKSRKFLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKE--RGCA 1632
            LC+ +KF++A E  LFSL K  ++   V++ V++ LCS  +  EAF LFYE+ E  R  A
Sbjct: 522  LCEDKKFIDAAEFSLFSLRKRHELGVAVHSQVLDGLCSDRRTSEAFQLFYELNENKRTSA 581

Query: 1633 SINSSCLCALKVALENGEKMNEAKFVAKQINRA 1731
                  L  L  ALE    + EA FVAKQ+ RA
Sbjct: 582  VAAPRSLVFLHHALEEAGMVQEAGFVAKQMRRA 614


>gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  468 bits (1203), Expect = e-129
 Identities = 263/565 (46%), Positives = 351/565 (62%), Gaps = 7/565 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + +++LF  + S    PSV S+NSLL             ++++EM 
Sbjct: 151  FNSLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEML 210

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                V PD  TFN LIRGFC+NSMV E +  FK+MS   C PDV+TYNTL+DGLCRAG+V
Sbjct: 211  SMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKV 270

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
             IAH ++NGM + + D  PNVV+YTTLIRGYC K            M + GL+PN  TYN
Sbjct: 271  EIAHNVVNGMSKRSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYN 330

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLI+GLC+++++D +KE+ +    G E   F PDTCTFNTL+ +HCN G   +ALKVF K
Sbjct: 331  TLIKGLCEAQKLDKIKEIFEGTMIGGE---FTPDTCTFNTLMHSHCNAGNLDEALKVFAK 387

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M+E++V  DS TY +LI  LC+ G++ RAEEL DEL KKE+L R   C PLVA+YNP+  
Sbjct: 388  MSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASYNPIFG 447

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            YL  +GKT+KA  V +QL+  +   D  ++KT+I                V M +RD VP
Sbjct: 448  YLSSNGKTQKAEEVFRQLM-RRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVP 506

Query: 1120 DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            D EIY  LI+G LQ+     A + L KM  S H P T  FH +L  ++K+     ES   
Sbjct: 507  DEEIYVSLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHSLLAELLKQ-HCAHESASF 565

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            V +ML++ +R NI+LST +V  LF     D+AF+IV +LYE GY +KMEELV  LC+SRK
Sbjct: 566  VTLMLEKKIRQNINLSTHLVRLLFSHGLRDKAFEIVGMLYENGYSIKMEELVCFLCQSRK 625

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKE-RGCASINSSCL 1653
             LEA EML FSL+K + +  D +  VI  LC   K  EAF L+YE+ E +G   +   CL
Sbjct: 626  LLEACEMLQFSLQKHQSVDIDNFNQVIVGLCDINKLSEAFGLYYELVENKGYQQL--PCL 683

Query: 1654 CALKVALENGEKMNEAKFVAKQINR 1728
             +LK ALE   +  EA+F++K+I R
Sbjct: 684  DSLKSALEVAGRSVEAEFLSKRIPR 708


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
            gi|550323558|gb|ERP53036.1| hypothetical protein
            POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  465 bits (1196), Expect = e-128
 Identities = 255/561 (45%), Positives = 347/561 (61%), Gaps = 6/561 (1%)
 Frame = +1

Query: 58   NALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMFG 225
            N LLR    AG    A++LF L+ S    PSV ++NSLL              +F+EM G
Sbjct: 165  NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 224

Query: 226  R-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVR 402
               V PD  TFN LIRGFC NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+VR
Sbjct: 225  TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 284

Query: 403  IAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYNT 582
            IAH ++ GM +   D +P+VV+YTTL+RGYC K            M+S GL+PN ITYNT
Sbjct: 285  IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 344

Query: 583  LIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKM 762
            LI+GLC+ ++ D +KE+L     G     F PDTCT+NTL+ A C+ G F +ALK+F+KM
Sbjct: 345  LIKGLCEVQKFDKIKEILGGAVGGRG---FVPDTCTYNTLMNAQCDAGNFDEALKMFKKM 401

Query: 763  TEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLNY 942
             E++V  DS TY +LIR LC+ G+F RAE+L D+L  +++L R   C PLVA YNP+ ++
Sbjct: 402  KELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDF 461

Query: 943  LCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVPD 1122
            LC +GKT KA  V +QL+  K   D  ++KT+I                + M +RD VPD
Sbjct: 462  LCKNGKTHKAERVFRQLM-KKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPD 520

Query: 1123 AEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLV 1299
             E Y +LINGFLQ+     A++ L +M  S + P T  FH +L  ++ K+ + +ES   V
Sbjct: 521  FETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELL-KNDFARESASFV 579

Query: 1300 IVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKF 1479
            ++M+ R +R NI+LST  +  LF S    +AF+IV+LLY+ GY + MEEL+  +C++ K 
Sbjct: 580  VLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKL 639

Query: 1480 LEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCA 1659
            L+A++ML F LEK   +  +V   VI  LC   + LEAF L+Y + E+       SCL  
Sbjct: 640  LDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQ-QLSCLEG 698

Query: 1660 LKVALENGEKMNEAKFVAKQI 1722
            L+ ALE G +  EAKFV+K++
Sbjct: 699  LRTALEAGGRSEEAKFVSKRM 719



 Score =  129 bits (323), Expect = 6e-27
 Identities = 115/497 (23%), Positives = 207/497 (41%), Gaps = 13/497 (2%)
 Frame = +1

Query: 298  EAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTAPNVVSY-T 474
            +AF  F   SR+G A D  +Y  +LD L R G + IA   L  + R +  +      +  
Sbjct: 106  KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCN 165

Query: 475  TLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYNTLIQGLCKSRRMDLVKELLDR--GK 648
            TL+R Y +             M S G+ P+ IT+N+L+  L K  R ++   + D   G 
Sbjct: 166  TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 225

Query: 649  NGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIRGLCEN 828
             G       PDT TFN LI   C      +  + F++M+    + D VTY  L+ GLC  
Sbjct: 226  YG-----VTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 280

Query: 829  GEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLNYLCHSGKTEKARIVLQQLLDNKA 1008
            G+   A  ++  ++KK          P V TY  ++   C   + ++A +V ++++    
Sbjct: 281  GKVRIAHNVVKGMVKK-----MKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGL 335

Query: 1009 KFDLEAFKTVI-XXXXXXXXXXXXXXXXVSMSKRDLVPDAEIYQILINGFLQQ-NIDFAW 1182
            K +   + T+I                  ++  R  VPD   Y  L+N      N D A 
Sbjct: 336  KPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEAL 395

Query: 1183 EVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTK------ESGDLVIVMLQRSVRPNIDLS 1344
            ++ +KM   K +P +  + +++  + ++  + +      +  D  I++      P +   
Sbjct: 396  KMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAY 455

Query: 1345 TKVVENLFRSDSNDRAFKIVKLLYEKGYR--LKMEELVVSLCKSRKFLEAREMLLFSLEK 1518
              + + L ++    +A ++ + L +KG +     + L++  CK   F    ++LLF L +
Sbjct: 456  NPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRR 515

Query: 1519 SEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNE 1698
                  + Y  +IN    KG+ + A+     + +       S     L   L+N      
Sbjct: 516  DYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARES 575

Query: 1699 AKFVAKQINRAVDEVAN 1749
            A FV   I+R + +  N
Sbjct: 576  ASFVVLMIDRKIRQNIN 592


>ref|XP_002326829.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  465 bits (1196), Expect = e-128
 Identities = 255/561 (45%), Positives = 347/561 (61%), Gaps = 6/561 (1%)
 Frame = +1

Query: 58   NALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMFG 225
            N LLR    AG    A++LF L+ S    PSV ++NSLL              +F+EM G
Sbjct: 101  NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 160

Query: 226  R-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVR 402
               V PD  TFN LIRGFC NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+VR
Sbjct: 161  TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 220

Query: 403  IAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYNT 582
            IAH ++ GM +   D +P+VV+YTTL+RGYC K            M+S GL+PN ITYNT
Sbjct: 221  IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 280

Query: 583  LIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKM 762
            LI+GLC+ ++ D +KE+L     G     F PDTCT+NTL+ A C+ G F +ALK+F+KM
Sbjct: 281  LIKGLCEVQKFDKIKEILGGAVGGRG---FVPDTCTYNTLMNAQCDAGNFDEALKMFKKM 337

Query: 763  TEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLNY 942
             E++V  DS TY +LIR LC+ G+F RAE+L D+L  +++L R   C PLVA YNP+ ++
Sbjct: 338  KELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDF 397

Query: 943  LCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVPD 1122
            LC +GKT KA  V +QL+  K   D  ++KT+I                + M +RD VPD
Sbjct: 398  LCKNGKTHKAERVFRQLM-KKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPD 456

Query: 1123 AEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLV 1299
             E Y +LINGFLQ+     A++ L +M  S + P T  FH +L  ++ K+ + +ES   V
Sbjct: 457  FETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELL-KNDFARESASFV 515

Query: 1300 IVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKF 1479
            ++M+ R +R NI+LST  +  LF S    +AF+IV+LLY+ GY + MEEL+  +C++ K 
Sbjct: 516  VLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKL 575

Query: 1480 LEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCA 1659
            L+A++ML F LEK   +  +V   VI  LC   + LEAF L+Y + E+       SCL  
Sbjct: 576  LDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQ-QLSCLEG 634

Query: 1660 LKVALENGEKMNEAKFVAKQI 1722
            L+ ALE G +  EAKFV+K++
Sbjct: 635  LRTALEAGGRSEEAKFVSKRM 655



 Score =  129 bits (323), Expect = 6e-27
 Identities = 115/497 (23%), Positives = 207/497 (41%), Gaps = 13/497 (2%)
 Frame = +1

Query: 298  EAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTAPNVVSY-T 474
            +AF  F   SR+G A D  +Y  +LD L R G + IA   L  + R +  +      +  
Sbjct: 42   KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCN 101

Query: 475  TLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYNTLIQGLCKSRRMDLVKELLDR--GK 648
            TL+R Y +             M S G+ P+ IT+N+L+  L K  R ++   + D   G 
Sbjct: 102  TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 161

Query: 649  NGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIRGLCEN 828
             G       PDT TFN LI   C      +  + F++M+    + D VTY  L+ GLC  
Sbjct: 162  YG-----VTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 216

Query: 829  GEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLNYLCHSGKTEKARIVLQQLLDNKA 1008
            G+   A  ++  ++KK          P V TY  ++   C   + ++A +V ++++    
Sbjct: 217  GKVRIAHNVVKGMVKK-----MKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGL 271

Query: 1009 KFDLEAFKTVI-XXXXXXXXXXXXXXXXVSMSKRDLVPDAEIYQILINGFLQQ-NIDFAW 1182
            K +   + T+I                  ++  R  VPD   Y  L+N      N D A 
Sbjct: 272  KPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEAL 331

Query: 1183 EVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTK------ESGDLVIVMLQRSVRPNIDLS 1344
            ++ +KM   K +P +  + +++  + ++  + +      +  D  I++      P +   
Sbjct: 332  KMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAY 391

Query: 1345 TKVVENLFRSDSNDRAFKIVKLLYEKGYR--LKMEELVVSLCKSRKFLEAREMLLFSLEK 1518
              + + L ++    +A ++ + L +KG +     + L++  CK   F    ++LLF L +
Sbjct: 392  NPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRR 451

Query: 1519 SEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNE 1698
                  + Y  +IN    KG+ + A+     + +       S     L   L+N      
Sbjct: 452  DYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARES 511

Query: 1699 AKFVAKQINRAVDEVAN 1749
            A FV   I+R + +  N
Sbjct: 512  ASFVVLMIDRKIRQNIN 528


>ref|XP_003573599.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Brachypodium distachyon]
          Length = 627

 Score =  464 bits (1195), Expect = e-128
 Identities = 254/577 (44%), Positives = 361/577 (62%), Gaps = 12/577 (2%)
 Frame = +1

Query: 49   NSFNALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMF-G 225
            ++ NALLR LA AG +R A  LFR IP+P+  S+NSLL            + L       
Sbjct: 54   HALNALLRALAAAGRVRAATDLFRRIPTPTPHSFNSLLSALLRRGRLRAANALLAAFLRS 113

Query: 226  RAVRPDVCTFNTLIRGFCL---NSMVHEAFHVFKEMSR-HGCAPDVVTYNTLLDGLCRAG 393
            R   PD  T NTL+ G       +      ++F+ +   +  APD V+YN+LL  LCRAG
Sbjct: 114  RTASPDAATLNTLLHGLSAAAPRASPPALVNLFRFLPETYAFAPDAVSYNSLLCALCRAG 173

Query: 394  EVRIAHKLLNGMRRNTP----DTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQP 561
            ++  A KL + MR           P+VV+YTT+IR YC++            M + G+ P
Sbjct: 174  DLPAARKLFDVMRVRATGGNGSVPPDVVTYTTMIRAYCARRLADEALAVFRMMAADGVPP 233

Query: 562  NSITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDA 741
            N ITYNT++QG C+  R+DLVK LL+          F+PDTCTFNTL+A HC  G   +A
Sbjct: 234  NRITYNTMVQGFCEVGRVDLVKGLLETDS-------FKPDTCTFNTLMATHCREGQVKEA 286

Query: 742  LKVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVAT 921
            ++VF +M E++V  DS +Y  +IRGLCENGEF RAEEL+DEL++KEVL++RG C+PL+A 
Sbjct: 287  MEVFGQMVELRVSRDSASYSTVIRGLCENGEFVRAEELVDELVEKEVLKKRGGCVPLIAA 346

Query: 922  YNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMS 1101
            YNP+  YLC +GK  KAR++  QLLD ++K D  AFKT+I                +SM 
Sbjct: 347  YNPVFVYLCENGKANKARVLFGQLLDQRSKVDFAAFKTLILGHCKEGDFEEGYQLVLSML 406

Query: 1102 KRDLVPDAEIYQILINGFLQQ-NIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYT 1278
            KRDLVPD E Y  +++GF ++  +  AWE L +M +S  RPST  FH VL+G++KK    
Sbjct: 407  KRDLVPDDECYIAVVDGFSRRGRMKIAWEALHRMLDSGLRPSTSTFHSVLLGLLKKDGCA 466

Query: 1279 KESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVS 1458
            KE+ DL+ +ML+R++R N+DLST ++++L +S+ N+RA++I+  LY+ GY +KME L+ S
Sbjct: 467  KEAADLIEIMLERNIRQNLDLSTNMIDSLLKSNLNERAYRIITSLYDHGYYIKMETLIES 526

Query: 1459 LCKSRKFLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYE-IKERG-CA 1632
            LC+ +KF+EA E+ LFSL+K  ++   V + V++ LC+ G+A +AF LFYE I+ RG  A
Sbjct: 527  LCEEKKFIEAAELTLFSLQKHHELGVAVCSMVLDGLCTAGRASDAFRLFYELIENRGTSA 586

Query: 1633 SINSSCLCALKVALENGEKMNEAKFVAKQINRAVDEV 1743
            ++  S L AL  AL+   KM EA F+AKQ+ RA   +
Sbjct: 587  AVAPSSLVALYHALKEDGKMKEADFIAKQMRRAAARI 623


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  463 bits (1192), Expect = e-127
 Identities = 244/562 (43%), Positives = 356/562 (63%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + ++++F ++ S    PSV ++NSLL              +++EM 
Sbjct: 152  FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                V PD  TFN LIRGFC+N MV + F +F ++SR GC PDVVTYNTL+DGLCRAG+V
Sbjct: 212  STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
             +A+ ++ GM + + D  PNVV+YTTLIRGYC+K            M++ GL+ N+ITYN
Sbjct: 272  TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLI+GLC++R+ + +K++L+ G  GD    F PDTCTFNTL+  HC+ G   DALKVFE+
Sbjct: 332  TLIKGLCEARKFEKIKDILE-GTAGDG--TFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M+E+++  DS TY  L+R LC+ G + +AE+L+D+LL++++L     C PLVA YNP+  
Sbjct: 389  MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFK 448

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            YLC +GKT+KA    +QL+  +   D  ++KT+I                V M ++D +P
Sbjct: 449  YLCETGKTKKAEKAFRQLM-RRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLP 507

Query: 1120 DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            D E Y+ LING L  +    A + L KM  S HRP++  FH +L  ++++ + T ES  L
Sbjct: 508  DFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR-TSESASL 566

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            + +ML +++R N+  ST  V  LF +  ND+AF++V LLY KGY +KMEEL+  LC  RK
Sbjct: 567  IQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRK 626

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             ++  ++LLFSLE  + +  D+  TVI +LC   K  EAF L+Y++ E G      SC  
Sbjct: 627  VIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQ-QLSCQN 685

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             LKV+LE GEK+ EA+FV+K++
Sbjct: 686  QLKVSLEAGEKLEEAEFVSKRM 707


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  459 bits (1181), Expect = e-126
 Identities = 256/562 (45%), Positives = 345/562 (61%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLF----RLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + +V+LF     L  +PSV ++NSLL             ++F+EM 
Sbjct: 211  FNSLIRSYGNAGLFQESVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEML 270

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
            G   V PD  TFN LIRGFC+NSMV E FH FKEMSR  C PDVVTYNTL+DGLCRAG+V
Sbjct: 271  GTYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKV 330

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
             IA  ++ GM + + D  PN+V+YTTLI+GYC K            M   GL+PN ITYN
Sbjct: 331  DIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYN 390

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLI+GLC+++++D V+++LD      E   F P+TCTFNTLI  HC  G   +ALKVFEK
Sbjct: 391  TLIKGLCEAQKLDDVRKILDGTMRRGE---FVPNTCTFNTLIHTHCQAGRLDEALKVFEK 447

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M E+QV  DS TY  LIR LC+ G++ RAEEL D+L  KE+L     C P+VA YNPM  
Sbjct: 448  MLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVAAYNPMFE 507

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            +LC +GKT+KA  V +QL+  +   D  ++KT+I                V M +RD VP
Sbjct: 508  HLCRNGKTKKAERVFRQLM-KRGTQDPPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVP 566

Query: 1120 DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            DAEIY+ LI G LQ++    A   L KM  S H P   AFH +L  ++KK    KES   
Sbjct: 567  DAEIYESLITGLLQKDKPLLAKTTLEKMLRSSHLPRASAFHCILEELLKKG-CAKESASF 625

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
              +ML++  R NI LST ++  LF +   D+AF+++K+LYE GY +K+EELV  LC+  K
Sbjct: 626  ATLMLEQKFRQNITLSTNLITLLFSNGLGDKAFELIKVLYESGYSVKIEELVSFLCQKSK 685

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             LEA ++L FSL+K++ +  +++  VI  L    +  EAFDL+Y++ E+G       CL 
Sbjct: 686  LLEACKLLQFSLQKNQSVGIEIFNKVIGGLSKIRRVSEAFDLYYKLVEKG-VHHRLVCLE 744

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             LK AL+   +  EA FV+K++
Sbjct: 745  DLKTALKLAGRSAEADFVSKRM 766


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  459 bits (1181), Expect = e-126
 Identities = 253/562 (45%), Positives = 344/562 (61%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN L++    AG  + ++++F+++ S    PSV ++NSL              +LF+EM 
Sbjct: 159  FNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEML 218

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                 +PDV TFN LIRGFC+NSMV + F  FKEM RH C PDV+TYNT++DGLCRAG+V
Sbjct: 219  KTFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKV 278

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
             IAH +L GM +     +PNVVSYTTL+RGYC K            MI  GL+P SITYN
Sbjct: 279  EIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYN 338

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TL+QGLC+++R D +KE+L+ G  G   L+  PDTCTFNTLI  HCN+G   +A+KVFE 
Sbjct: 339  TLVQGLCEAKRFDRIKEILE-GTLGSGGLI--PDTCTFNTLITFHCNVGNLDEAVKVFEN 395

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M  ++V  DS TY ILIR  C+ G F RAE+L D+L+KKE+L R   C PL+A YNPM  
Sbjct: 396  MLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFE 455

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            Y C  GKT+KA  V +QL+  +   D  A++ +I                V M +RD VP
Sbjct: 456  YFCKIGKTKKAEKVFRQLM-RRGTQDPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVP 514

Query: 1120 DAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            +  IY+ LI G LQ+N    A++ L KM  S H P +  FH +L  ++KK+    E   L
Sbjct: 515  NIVIYESLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSSTFHQILTELIKKN-CASECASL 573

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            V +ML   VR NI+LST  V  LF++   +RAF+IV+ LYE  Y + ME LV  LC+ RK
Sbjct: 574  VTLMLDNKVRQNINLSTDTVRILFQAGLRERAFEIVRCLYENEYVVDMEGLVAFLCQCRK 633

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             LEA ++LLFS  K   ++ D  +T+++ LC   + LEAF+++YE+ E+G       C+ 
Sbjct: 634  LLEACKLLLFSSSKGHILNVDTCSTLLSALCKASRTLEAFEIYYELLEKGVQQ-PLECVE 692

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             L +ALE   +  EA+FV K+I
Sbjct: 693  ELGLALETEGRTKEAEFVKKRI 714


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  458 bits (1179), Expect = e-126
 Identities = 253/562 (45%), Positives = 347/562 (61%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN L++    AG  + ++++F+++ S    PSV ++NSL              +LF+EM 
Sbjct: 153  FNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEML 212

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                 +PDV TFN LIRGFC+NSMV + F  FKEM RH C P+V+TYNT++DGLCRAG+V
Sbjct: 213  KTFGAKPDVYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKV 272

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
             IAH +L GM +     +PNVVSYTTL+RGYC K            MI  GL+P SITYN
Sbjct: 273  EIAHNVLKGMAKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYN 332

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TL+QGLC+++R D +KE+L+ G  G   L+  PDTCTFNTLI  HCN+G   +A+KVFE 
Sbjct: 333  TLVQGLCEAKRFDRIKEILE-GTLGSGGLI--PDTCTFNTLITYHCNVGNLDEAVKVFEN 389

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M  ++V  DS TY ILIR  C+ G F RAE+L D+L+KKEVL R   C PL+A YNPM  
Sbjct: 390  MLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFE 449

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            Y C  GKT+KA  V +QL+  +   D  A++ +I                V M +RD VP
Sbjct: 450  YFCKIGKTKKAEKVFRQLM-RRGTQDPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVP 508

Query: 1120 DAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            +  IY+ LI G LQ+N    A++ L KM  S H P +  +H +L  ++KK+    E   L
Sbjct: 509  NIVIYESLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSSIYHQILTELIKKN-CASECASL 567

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            V +ML   VR NI+LST  V+ LF++   +RAF+IV+ LYE  Y + ME LV  LC+ RK
Sbjct: 568  VTLMLDNKVRQNINLSTDTVKILFQTGLRERAFEIVRCLYENEYVVDMEGLVAFLCQRRK 627

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             LEA ++LLFSL K   ++ D  +T+++ LC   +A EAF+++YE+ E+G       C+ 
Sbjct: 628  LLEACKLLLFSLSKGHILNVDTCSTLLSALCKARRASEAFEIYYELLEKGVQQ-PLECIE 686

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             L +ALE   ++ EA+FV K+I
Sbjct: 687  ELGLALETEGRIKEAEFVKKRI 708


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  455 bits (1171), Expect = e-125
 Identities = 259/562 (46%), Positives = 344/562 (61%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIP----SPSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + ++++F+ +     SPSV ++NSLL              LF+EM 
Sbjct: 168  FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                V PD  TFN LIRGFC+NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+V
Sbjct: 228  DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
            +IAH ++ GM + +P+ +PNVV+YTTLIRGYC K            M+S GL+PN ITYN
Sbjct: 288  KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLIQGLC+++++D +KE+L+ G  GD    F PDTCT NTLI AHC MG   +A  VFEK
Sbjct: 348  TLIQGLCEAQKLDKIKEILE-GMVGDGG--FIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M+E++V  DS TY +L+R LC+ G+F RAEE  DEL +KE+L     C PLVA YNPM  
Sbjct: 405  MSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFE 464

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            YLC +GKT+KA  V +QL+  +   D  ++KT+I                V M +RD VP
Sbjct: 465  YLCSNGKTKKAERVFRQLM-KRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVP 523

Query: 1120 DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            DAE Y ++I+G L++     A + L KM  S H P+T  FH +L  +V+K     ES  L
Sbjct: 524  DAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKG-CAHESASL 582

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            V +ML+R +R NIDLST                              MEELV  LC+SRK
Sbjct: 583  VKLMLERRIRQNIDLSTHT----------------------------MEELVSFLCQSRK 614

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             LEA++MLLFSLEK + +  D+ +TVI+ LC   K  EAF L+YE+ E+G      +C  
Sbjct: 615  LLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQH-RLTCQE 673

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             L+++LE   ++NEAKFV+K++
Sbjct: 674  DLRISLEAEGRLNEAKFVSKKM 695


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  454 bits (1169), Expect = e-125
 Identities = 241/564 (42%), Positives = 352/564 (62%), Gaps = 6/564 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + ++++F ++ S    PSV ++NSLL              +++EM 
Sbjct: 152  FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                V PD  TFN LIRGFC+N MV + F +F ++SR GC PDVVTYNTL+DGLCRAG+V
Sbjct: 212  STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
             +A+ ++ GM + + D  PNVV+YTTLIRGYC+K            M++ GL+ N+ITYN
Sbjct: 272  TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLI+GLC++R+ + +K++L+ G  GD    F PDTCTFNTL+  HC+ G   DALKVFE+
Sbjct: 332  TLIKGLCEARKFEKIKDILE-GTAGDG--TFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M+E+++  DS TY  L+R LC+ G + +AE+L+D+LL++++L     C PLVA YNP+  
Sbjct: 389  MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFK 448

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            YLC +GKT+KA    +QL+  +   D  ++KT+I                V M ++D  P
Sbjct: 449  YLCETGKTKKAEKAFRQLM-RRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXP 507

Query: 1120 DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            D E Y+ LING L  +    A + L KM  S HRP++  FH +L  ++++ +   ES  L
Sbjct: 508  DFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR-ASESASL 566

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            + +ML +++R N+  ST  V  LF +  ND+AF++V LLY KGY +KMEEL+  LC  RK
Sbjct: 567  IQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRK 626

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             ++  ++LLFSLE  + +  D+  TVI +LC   K  EAF L+Y++ E G      SC  
Sbjct: 627  VIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQ-QLSCQN 685

Query: 1657 ALKVALENGEKMNEAKFVAKQINR 1728
             LKV+L+ G K+ EA+ V K++ R
Sbjct: 686  QLKVSLKAGGKLEEAESVQKRMER 709


>ref|XP_006648252.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Oryza brachyantha]
          Length = 590

 Score =  454 bits (1168), Expect = e-125
 Identities = 253/571 (44%), Positives = 343/571 (60%), Gaps = 16/571 (2%)
 Frame = +1

Query: 67   LRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMFGRA--VRP 240
            L  L  +  L  A+   R +PSP     N  L            +      F R+    P
Sbjct: 21   LHLLLRSRDLHPALAYLRALPSPLTLLPNHALNALLRALAAARAASALFAAFLRSPSASP 80

Query: 241  DVCTFNTLIRGFCLNS------MVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVR 402
            D  T NTL+ G    S       +   FH   E   +  APD ++YN+LL  LCRAG++ 
Sbjct: 81   DAATLNTLLHGLSTASPQPSPPALLRLFHFLPET--YAFAPDAISYNSLLSALCRAGDLV 138

Query: 403  IAHKLLNGMR---RNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSIT 573
             A KL +GMR       D  PNV++YTT+I+ YC K            M++ G++PN IT
Sbjct: 139  TARKLFDGMRVGEEGRGDVFPNVITYTTMIKAYCGKRLVSEALAIFKIMVADGVEPNRIT 198

Query: 574  YNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVF 753
            YNT++QG C + RM+LVKE+LD          F+PDTCTFN L+AAHC  G   DA+KVF
Sbjct: 199  YNTMVQGFCDAGRMELVKEVLDMDS-------FKPDTCTFNILVAAHCREGRIEDAMKVF 251

Query: 754  EKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPM 933
             +M E++V  DS +Y ++IR LCEN EF +AEEL+DELL+KEVL++RG C PL+A YNP+
Sbjct: 252  NQMVELRVRRDSASYSMVIRALCENEEFAQAEELVDELLEKEVLKKRGGCTPLIAAYNPV 311

Query: 934  LNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDL 1113
              YLC  GKT+KAR++   LLD ++K D+ AFKT+I                +SM KRDL
Sbjct: 312  FVYLCEHGKTKKARMLFGLLLDRRSKVDVPAFKTLILGHCREGDFEQGYELVLSMLKRDL 371

Query: 1114 VPDAEIYQILINGFLQQ-NIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESG 1290
            VPD E Y  +I+GF Q+  + FAWE L +M NS  RPST  FH VL+G++ K    KE+ 
Sbjct: 372  VPDNECYIGVIDGFSQKGRMKFAWEALHRMLNSGLRPSTSTFHSVLLGLLNKDGCAKEAA 431

Query: 1291 DLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKS 1470
            DL+ +ML+R +R N+DLST +++ LFR+  NDRA+KIV  LY+ GY +KME+L+ SLCK 
Sbjct: 432  DLIEIMLERKIRQNVDLSTNLIDTLFRNCLNDRAYKIVTSLYDHGYYIKMEKLIASLCKE 491

Query: 1471 RKFLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSC 1650
            +KF+EA ++ LFS +K + +     + V++ LC  G+A EAF LFYE+ E   +S +S+ 
Sbjct: 492  KKFMEAADLTLFSFKKCQNLGVAFPSMVMDGLCITGRASEAFWLFYELIENRSSSSSSAA 551

Query: 1651 ----LCALKVALENGEKMNEAKFVAKQINRA 1731
                L AL  ALE   KM EA FVAKQ+ RA
Sbjct: 552  APRSLVALHHALEESGKMKEADFVAKQMRRA 582


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  451 bits (1161), Expect = e-124
 Identities = 256/562 (45%), Positives = 340/562 (60%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + +V++F  + S    PSV ++NSLL              +F+EM 
Sbjct: 159  FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                V PD  TFN LIRGFC NSMV E F  FKEMSR  C PD+VTYNTL+DGLCRAG+V
Sbjct: 219  STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
             IAH ++NGM + + +  P+VV+YTTL+RGYC K            M+S GL+PN ITYN
Sbjct: 279  NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLI+GLC+ +++D +K++ +    G     F PDTCT NTL+ AHCN G  +DAL+VFEK
Sbjct: 339  TLIKGLCEVQKIDKIKQIFEGALGGGG---FIPDTCTLNTLMNAHCNAGNLNDALEVFEK 395

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M  + V  DS TY +LIR LC+ G F RAE+L DEL +KE+L R   C PLVA Y  M  
Sbjct: 396  MMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFE 455

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            +LC +GKT KA  V +QL+  +   D  +FK +I                V M +RD VP
Sbjct: 456  FLCRNGKTAKAERVFRQLM-KRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVP 514

Query: 1120 DAEIYQILINGFLQQNIDF-AWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            D E YQ LI+G LQ+     A++ L KM  S H P T  FH +L  ++ K     ES   
Sbjct: 515  DLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKG-CAHESARF 573

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            +++ML+  +R NI+LST  V  LF S   D+AFKIV LLY  GY + MEEL+  L  +RK
Sbjct: 574  IMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFLSHNRK 633

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
            FL A ++LLF LEK + +  D+  TVI  LC   +  EAF L+YE+ E+G  +    CL 
Sbjct: 634  FLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKG-NNQPLRCLE 692

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             L+VALE   ++ E KF++K++
Sbjct: 693  NLRVALEARGRLEEVKFLSKRM 714


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g02060, chloroplastic; Flags: Precursor
            gi|332189251|gb|AEE27372.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  451 bits (1159), Expect = e-124
 Identities = 254/562 (45%), Positives = 344/562 (61%), Gaps = 6/562 (1%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIP----SPSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + +V+LF+ +     SPSV ++NSLL             DLF+EM 
Sbjct: 141  FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
                V PD  TFNTLI GFC NSMV EAF +FK+M  + C PDVVTYNT++DGLCRAG+V
Sbjct: 201  RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260

Query: 400  RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSITYN 579
            +IAH +L+GM +   D  PNVVSYTTL+RGYC K            M+S GL+PN++TYN
Sbjct: 261  KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320

Query: 580  TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 759
            TLI+GL ++ R D +K++L  G   D    F PD CTFN LI AHC+ G    A+KVF++
Sbjct: 321  TLIKGLSEAHRYDEIKDILIGG--NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378

Query: 760  MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYNPMLN 939
            M  M++  DS +Y +LIR LC   EF RAE L +EL +KEVL  +  C PL A YNPM  
Sbjct: 379  MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438

Query: 940  YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSKRDLVP 1119
            YLC +GKT++A  V +QL+    + D  ++KT+I                V M +R+ VP
Sbjct: 439  YLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVP 497

Query: 1120 DAEIYQILINGFLQ-QNIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 1296
            D E Y++LI+G L+      A + L++M  S + P    FH VL  + K+ K+  ES  L
Sbjct: 498  DLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR-KFANESFCL 556

Query: 1297 VIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 1476
            V +ML++ +R NIDLST+VV  LF S   ++AF IV+LLY+ GY +KMEEL+  LC++RK
Sbjct: 557  VTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRK 616

Query: 1477 FLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 1656
             L+A  ++LF LEKS+ +  D   TVI  LC   +  EAF L+ E+ E G      SC  
Sbjct: 617  LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQ-QLSCHV 675

Query: 1657 ALKVALENGEKMNEAKFVAKQI 1722
             L+ ALE   K  E +FV+K++
Sbjct: 676  VLRNALEAAGKWEELQFVSKRM 697



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 76/343 (22%), Positives = 124/343 (36%), Gaps = 13/343 (3%)
 Frame = +1

Query: 52   SFNALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMFGRA 231
            +FN L++    AGHL  A++                               +F+EM    
Sbjct: 355  TFNILIKAHCDAGHLDAAMK-------------------------------VFQEMLNMK 383

Query: 232  VRPDVCTFNTLIRGFCLNSMVHEAFHVFKE-------MSRHGCAPDVVTYNTLLDGLCRA 390
            + PD  +++ LIR  C+ +    A  +F E       + +  C P    YN + + LC  
Sbjct: 384  LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN 443

Query: 391  GEVRIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNSI 570
            G+ + A K+   + +      P   SY TLI G+C +            M+     P+  
Sbjct: 444  GKTKQAEKVFRQLMKRGVQDPP---SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLE 500

Query: 571  TYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDAL-- 744
            TY  LI GL K     L  + L R         + P   TF++++A        +++   
Sbjct: 501  TYELLIDGLLKIGEALLAHDTLQRMLRSS----YLPVATTFHSVLAELAKRKFANESFCL 556

Query: 745  --KVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDE--LLKKEVLRRRGRCLPL 912
               + EK     +DL +    +L     +   F     L D   L+K E L         
Sbjct: 557  VTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEEL--------- 607

Query: 913  VATYNPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVI 1041
                   L YLC + K   A  ++   L+     D++   TVI
Sbjct: 608  -------LGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVI 643


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  448 bits (1153), Expect = e-123
 Identities = 258/575 (44%), Positives = 349/575 (60%), Gaps = 13/575 (2%)
 Frame = +1

Query: 55   FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXXSDLFEEMF 222
            FN+L+R    AG  + AV +F+ + S     SVFS+NSL              ++++EM 
Sbjct: 153  FNSLIRSYGAAGLFQEAVNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEML 212

Query: 223  GR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 399
            G   V PD  TFN LIRGFC++SMV E F  FKEM R  C PDVVTYNTL+DGLCR G+V
Sbjct: 213  GMYGVEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKV 272

Query: 400  RIAHKLLNGMRRNTPDTA-----PNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPN 564
             IA  ++ GM   + +       PNVV+YTTLIRGYC +            M S G++PN
Sbjct: 273  EIARNVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPN 332

Query: 565  SITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDAL 744
             ITYNTL +GLC+++R+D +KE+L+    G+    F PDTCTFNTL+ +HC  G   +AL
Sbjct: 333  EITYNTLFKGLCEAKRLDKIKEILEGAMRGEG---FTPDTCTFNTLMHSHCIAGNLEEAL 389

Query: 745  KVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATY 924
            KVF  M+E++V  DS TY +LIR  CE  ++ +AEEL DEL KK++L     C P+VA+Y
Sbjct: 390  KVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASY 449

Query: 925  NPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVIXXXXXXXXXXXXXXXXVSMSK 1104
             P+  YLC +G+T+KA  V +QLL  +   D  +FKT+I                V M +
Sbjct: 450  KPIFEYLCSNGRTKKADEVFRQLL-KRGTQDPPSFKTLIMGHCREGTYEAGYKLVVLMLR 508

Query: 1105 RDLVPDAEIYQILINGFLQQ-NIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTK 1281
            RD VPD +IY  LI+GFL++ N   A + L KM  S H P T  FH +L  +++K    +
Sbjct: 509  RDYVPDVKIYDSLIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILAALLEK-HCAR 567

Query: 1282 ESGDLVIVMLQRSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSL 1461
            ES  L  +ML+++ RPNIDLST +++ LF     ++AFKIV LL++ GY +K+EELV  L
Sbjct: 568  ESASLFSLMLEKNFRPNIDLSTDLLKLLFSEGLQEKAFKIVGLLHDGGYSIKLEELVKFL 627

Query: 1462 CKSRKFLEAREMLLFSLEKSEKISNDVYTTVINKLCSKGKALEAFDLFYEIKERGCASIN 1641
            C+SRK LEA E+L FSL K E +S D+   VI  LC   K  EAF L+YE+ E G     
Sbjct: 628  CQSRKLLEACELLQFSLRKQENVSIDILDQVILGLCEINKLREAFGLYYELIENGDHG-Q 686

Query: 1642 SSCLCALKVALENGEKMNEAKFVAKQ--INRAVDE 1740
              CL  LK +LE   +  EA FV+K+  I++ VD+
Sbjct: 687  LPCLHHLKSSLEVAGRSVEADFVSKRMPIHQLVDK 721



 Score = 68.6 bits (166), Expect = 1e-08
 Identities = 76/338 (22%), Positives = 136/338 (40%), Gaps = 8/338 (2%)
 Frame = +1

Query: 52   SFNALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXXSDLFEEMFGRA 231
            +FN L+     AG+L  A+++FR++                        S+L        
Sbjct: 371  TFNTLMHSHCIAGNLEEALKVFRMM------------------------SEL-------K 399

Query: 232  VRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRH-------GCAPDVVTYNTLLDGLCRA 390
            V PD  T++ LIR +C      +A  +F E+S+        GC P V +Y  + + LC  
Sbjct: 400  VPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASYKPIFEYLCSN 459

Query: 391  GEVRIAHKLLNG-MRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXXMISVGLQPNS 567
            G  + A ++    ++R T D      S+ TLI G+C +            M+     P+ 
Sbjct: 460  GRTKKADEVFRQLLKRGTQDPP----SFKTLIMGHCREGTYEAGYKLVVLMLRRDYVPDV 515

Query: 568  ITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALK 747
              Y++LI G  +     L ++ L++           P T TF++++AA     C  ++  
Sbjct: 516  KIYDSLIDGFLEKGNPLLAQQTLEKMLKSSH----LPRTSTFHSILAALLEKHCARESAS 571

Query: 748  VFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKKEVLRRRGRCLPLVATYN 927
            +F  M E     +      L++ L   G   +A +++       +L   G  + L     
Sbjct: 572  LFSLMLEKNFRPNIDLSTDLLKLLFSEGLQEKAFKIVG------LLHDGGYSIKL----E 621

Query: 928  PMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVI 1041
             ++ +LC S K  +A  +LQ  L  +    ++    VI
Sbjct: 622  ELVKFLCQSRKLLEACELLQFSLRKQENVSIDILDQVI 659