BLASTX nr result

ID: Zingiber23_contig00032445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00032445
         (643 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004973980.1| PREDICTED: atherin-like [Setaria italica]          59   9e-07
ref|XP_004971061.1| PREDICTED: nucleolin-like [Setaria italica]        59   9e-07
ref|NP_001168025.1| uncharacterized LOC100381751 [Zea mays] gi|2...    58   3e-06
tpg|DAA48171.1| TPA: putative RING zinc finger domain superfamil...    57   4e-06
gb|EEC72038.1| hypothetical protein OsI_04939 [Oryza sativa Indi...    57   4e-06
ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852...    57   5e-06
ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852...    57   5e-06
emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]    57   5e-06
ref|XP_004957277.1| PREDICTED: uncharacterized protein LOC101766...    56   8e-06

>ref|XP_004973980.1| PREDICTED: atherin-like [Setaria italica]
          Length = 276

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 36/76 (47%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXX-----GGGALR-----VCCVC 594
           VSLM+LLEQTD QWS G                           G GA R      CCVC
Sbjct: 172 VSLMALLEQTDRQWSAGAGAAAPREEEDVAGAEALELVEDDTEPGAGAGRGVVAGCCCVC 231

Query: 595 MMRLKGAAFIPCGHTF 642
           M R KGAAFIPCGHTF
Sbjct: 232 MARAKGAAFIPCGHTF 247


>ref|XP_004971061.1| PREDICTED: nucleolin-like [Setaria italica]
          Length = 301

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGA----LRVCCVCMMRLKG 612
           +SLM+LLEQ+D+QW +                       G G     + VCCVCM+R KG
Sbjct: 203 MSLMALLEQSDSQWDDDEDDEGGGGGARKNGEGDDDDDDGEGREEEMVHVCCVCMVRHKG 262

Query: 613 AAFIPCGHTF 642
           AAFIPCGHTF
Sbjct: 263 AAFIPCGHTF 272


>ref|NP_001168025.1| uncharacterized LOC100381751 [Zea mays] gi|223945569|gb|ACN26868.1|
           unknown [Zea mays] gi|414879016|tpg|DAA56147.1| TPA:
           putative RING zinc finger domain superfamily protein
           [Zea mays]
          Length = 306

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/72 (44%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGALR------VCCVCMMRL 606
           +SLM+LLEQTD+QW +                         G  R      VCCVCM+R 
Sbjct: 206 MSLMALLEQTDSQWDDDEDEEESGGGGGARKKGEGDDDEDDGEGREEEMVHVCCVCMVRH 265

Query: 607 KGAAFIPCGHTF 642
           KGAAFIPCGHTF
Sbjct: 266 KGAAFIPCGHTF 277


>tpg|DAA48171.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 250

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/67 (49%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGALR-VCCVCMMRLKGAAF 621
           VSLM+LLEQTD QWS                        G G +   CCVCM R KGAAF
Sbjct: 159 VSLMALLEQTDRQWS----AVPGAAAQAEEDEDSAAAAAGRGVVAGCCCVCMARAKGAAF 214

Query: 622 IPCGHTF 642
           IPCGHTF
Sbjct: 215 IPCGHTF 221


>gb|EEC72038.1| hypothetical protein OsI_04939 [Oryza sativa Indica Group]
          Length = 283

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/86 (38%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGA----------------- 573
           +SLM+LLEQ+D+QW +                       GGGA                 
Sbjct: 169 MSLMALLEQSDSQWDSEDEDDQGHGGGGGGGGNGGGGGGGGGARKNGDGDDDEDDGEGRE 228

Query: 574 ---LRVCCVCMMRLKGAAFIPCGHTF 642
              + VCCVCM+R KGAAFIPCGHTF
Sbjct: 229 EEMVHVCCVCMVRHKGAAFIPCGHTF 254


>ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852917 isoform 2 [Vitis
           vinifera] gi|359495533|ref|XP_003635013.1| PREDICTED:
           uncharacterized protein LOC100852917 isoform 3 [Vitis
           vinifera]
          Length = 335

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/66 (46%), Positives = 36/66 (54%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGALRVCCVCMMRLKGAAFI 624
           +SLM+LLE+TD Q   G+                     GGG    CCVCM+R KGAAFI
Sbjct: 243 MSLMALLEETDRQ--AGIVGPAYVLEEEEDEDEEEEAGSGGGIEYNCCVCMVRHKGAAFI 300

Query: 625 PCGHTF 642
           PCGHTF
Sbjct: 301 PCGHTF 306


>ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852917 isoform 1 [Vitis
           vinifera]
          Length = 329

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/66 (46%), Positives = 36/66 (54%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGALRVCCVCMMRLKGAAFI 624
           +SLM+LLE+TD Q   G+                     GGG    CCVCM+R KGAAFI
Sbjct: 237 MSLMALLEETDRQ--AGIVGPAYVLEEEEDEDEEEEAGSGGGIEYNCCVCMVRHKGAAFI 294

Query: 625 PCGHTF 642
           PCGHTF
Sbjct: 295 PCGHTF 300


>emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]
          Length = 326

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/66 (46%), Positives = 36/66 (54%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSNGVXXXXXXXXXXXXXXXXXXXXXGGGALRVCCVCMMRLKGAAFI 624
           +SLM+LLE+TD Q   G+                     GGG    CCVCM+R KGAAFI
Sbjct: 234 MSLMALLEETDRQ--AGIVGPAYVLEEEEDEDEEEEGDSGGGIEYNCCVCMVRHKGAAFI 291

Query: 625 PCGHTF 642
           PCGHTF
Sbjct: 292 PCGHTF 297


>ref|XP_004957277.1| PREDICTED: uncharacterized protein LOC101766305 [Setaria italica]
          Length = 200

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/70 (44%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 445 VSLMSLLEQTDTQWSN----GVXXXXXXXXXXXXXXXXXXXXXGGGALRVCCVCMMRLKG 612
           VSLM+LLE+T+ QW+     G                      GGG    CCVC+ R KG
Sbjct: 102 VSLMALLERTEQQWTTRAAGGQWKRVDAEDEAPPEEKENDKGGGGGVGGRCCVCVARGKG 161

Query: 613 AAFIPCGHTF 642
           AAFIPCGHTF
Sbjct: 162 AAFIPCGHTF 171


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