BLASTX nr result

ID: Zingiber23_contig00032422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00032422
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ91922.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   3e-07
dbj|BAJ86611.1| predicted protein [Hordeum vulgare subsp. vulgar...    60   3e-07
dbj|BAJ98489.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   3e-07
tpg|DAA45221.1| TPA: hypothetical protein ZEAMMB73_574558 [Zea m...    58   1e-06
emb|CBI25339.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_003557970.1| PREDICTED: uncharacterized protein LOC100826...    56   6e-06

>dbj|BAJ91922.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 728

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -3

Query: 180 GFRFVRCPRCMALLTEIACVPVYQCGECGVTLRAKHYNSTNQSAASLVSQSPKPE 16
           G R VRCPRC ++L E A VPVYQCG CG +LRAK  +   + A+  VS +P  E
Sbjct: 13  GARHVRCPRCRSVLQEPAGVPVYQCGGCGASLRAKLRSGDTRDASVSVSAAPSTE 67


>dbj|BAJ86611.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326513680|dbj|BAJ87859.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 729

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -3

Query: 180 GFRFVRCPRCMALLTEIACVPVYQCGECGVTLRAKHYNSTNQSAASLVSQSPKPE 16
           G R VRCPRC ++L E A VPVYQCG CG +LRAK  +   + A+  VS +P  E
Sbjct: 13  GARHVRCPRCRSVLQEPAGVPVYQCGGCGASLRAKLRSGDTRDASVSVSAAPSTE 67


>dbj|BAJ98489.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 461

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -3

Query: 180 GFRFVRCPRCMALLTEIACVPVYQCGECGVTLRAKHYNSTNQSAASLVSQSPKPE 16
           G R VRCPRC ++L E A VPVYQCG CG +LRAK  +   + A+  VS +P  E
Sbjct: 13  GARHVRCPRCRSVLQEPAGVPVYQCGGCGASLRAKLRSGDTRDASVSVSAAPSTE 67


>tpg|DAA45221.1| TPA: hypothetical protein ZEAMMB73_574558 [Zea mays]
          Length = 635

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 35/59 (59%)
 Frame = -3

Query: 180 GFRFVRCPRCMALLTEIACVPVYQCGECGVTLRAKHYNSTNQSAASLVSQSPKPEDASS 4
           GFR VRCP+C+ +L E   V VY+CG CG TLRAK   S  Q  A+   Q  +  D+ S
Sbjct: 6   GFRLVRCPKCLNILPEPPNVTVYKCGGCGTTLRAKTRASGGQQVAATAKQGRQDSDSYS 64


>emb|CBI25339.3| unnamed protein product [Vitis vinifera]
          Length = 1185

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = -3

Query: 174 RFVRCPRCMALLTEIACVPVYQCGECGVTLRAKHYNSTNQSAAS 43
           R VRCP+C  LL E+A +P+YQCG CGV LRAK++ ++ ++  S
Sbjct: 10  RLVRCPKCWKLLPEVAGIPLYQCGGCGVFLRAKNHGNSTKTTPS 53


>ref|XP_003557970.1| PREDICTED: uncharacterized protein LOC100826692 [Brachypodium
           distachyon]
          Length = 644

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 14/78 (17%)
 Frame = -3

Query: 204 MASNSTIPGFRFVRCPRCMALLTEIACVPVYQCGECGVTLRAK--------------HYN 67
           MAS +T  GFR VRCP+C+ +L E A V VYQCG C  TLRAK                +
Sbjct: 1   MASANT-GGFRLVRCPKCLNILPEPANVSVYQCGGCNTTLRAKVSVSNAQNVAKKQVRQD 59

Query: 66  STNQSAASLVSQSPKPED 13
           S N S  + VS    PE+
Sbjct: 60  SDNYSVVTSVSNGVSPEN 77


Top