BLASTX nr result

ID: Zingiber23_contig00032405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00032405
         (351 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844642.1| hypothetical protein AMTR_s00016p00232850 [A...    70   4e-10
gb|ABK22217.1| unknown [Picea sitchensis]                              65   1e-08
gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN400...    58   1e-06
gb|ADE76898.1| unknown [Picea sitchensis]                              57   2e-06

>ref|XP_006844642.1| hypothetical protein AMTR_s00016p00232850 [Amborella trichopoda]
           gi|548847113|gb|ERN06317.1| hypothetical protein
           AMTR_s00016p00232850 [Amborella trichopoda]
          Length = 213

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = +3

Query: 54  MQIYTSGPPDQSFRASQYSSHWESVIDEEDLELHLGIRTSRNLNSNR-------QDAKIQ 212
           +QI TS    ++   S + + W ++I +EDLEL LG       + N         D +  
Sbjct: 75  IQISTSRAFAEARGVSLHGASWGTIITDEDLELRLGFGGHSGYSGNPPRAISICDDGEED 134

Query: 213 DPNAQKSRKASSSHHPYGYDEVKLRCSICMDTMKEETSTTCGHIFC 350
           D    K +K   +       EVKL C+ICMDTMKEETST CGH+FC
Sbjct: 135 DLRCVKKKKGGLASTSV---EVKLTCAICMDTMKEETSTVCGHLFC 177


>gb|ABK22217.1| unknown [Picea sitchensis]
          Length = 203

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 45/106 (42%), Positives = 56/106 (52%), Gaps = 22/106 (20%)
 Frame = +3

Query: 99  SQYSSHWESVIDEEDLELHLGI----RTSRNLNSNRQDAKIQ--------------DPNA 224
           SQ SS   +V +EEDLEL LG+    RTS + N  R+ +++               D + 
Sbjct: 63  SQRSSRIPTV-NEEDLELRLGLTVTGRTSADHNPRRRHSRVPPNKTIVLCDDAGEADQSC 121

Query: 225 QKSRKA----SSSHHPYGYDEVKLRCSICMDTMKEETSTTCGHIFC 350
            K RK     SS        EVKL C+ICM TM+EETST CGHIFC
Sbjct: 122 SKKRKTGQQLSSDVQSDESKEVKLTCAICMSTMEEETSTVCGHIFC 167


>gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN40051.1| unknown
           [Picea sitchensis] gi|224285742|gb|ACN40586.1| unknown
           [Picea sitchensis]
          Length = 231

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 34/109 (31%)
 Frame = +3

Query: 126 VIDEEDLELHLG------------IRTSRNLNSNR------------------QDAKIQD 215
           VI EEDLEL LG            I + RN    R                   D + + 
Sbjct: 87  VIKEEDLELRLGPGGTSAHVGVVHIPSLRNGRPERVRIQPVTIVPPIVPINISDDGEEEV 146

Query: 216 PNAQKSRK----ASSSHHPYGYDEVKLRCSICMDTMKEETSTTCGHIFC 350
               K RK    ++S++ P    EVKL C+ICMD+MKEETST CGHIFC
Sbjct: 147 QKHVKKRKHGHPSNSNNLPVEVKEVKLTCAICMDSMKEETSTICGHIFC 195


>gb|ADE76898.1| unknown [Picea sitchensis]
          Length = 205

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 27/103 (26%)
 Frame = +3

Query: 123 SVIDEEDLELHLG----------IRTSRNLN-----------------SNRQDAKIQDPN 221
           +VI+ EDLEL +G          +R+ +N N                 ++  + ++    
Sbjct: 71  TVINLEDLELQVGPAGTRMPLGRVRSLKNRNRSCERKTSSCRDLVDLTTSNDECQLNSSM 130

Query: 222 AQKSRKASSSHHPYGYDEVKLRCSICMDTMKEETSTTCGHIFC 350
             K RK + S    G  E+KL C+ICMD MKEET+T CGH+FC
Sbjct: 131 VSKKRKPALST---GVKEIKLSCAICMDKMKEETTTICGHVFC 170


Top