BLASTX nr result

ID: Zingiber23_contig00032363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00032363
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...    55   7e-06
emb|CBI27968.3| unnamed protein product [Vitis vinifera]               55   1e-05
gb|EEE62637.1| hypothetical protein OsJ_17440 [Oryza sativa Japo...    55   1e-05
gb|EAY96854.1| hypothetical protein OsI_18775 [Oryza sativa Indi...    55   1e-05
ref|NP_001054861.1| Os05g0195200 [Oryza sativa Japonica Group] g...    55   1e-05

>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
 Frame = -3

Query: 419 KSGFCSXXXXXXXXXXG--MGWLDAAEGTSFPKGEEPE-ERVESGRALRAKIFEKLSKEC 249
           + GFCS             +G++D  E       EEP  ERVESGR LRAK+FEKLSKE 
Sbjct: 312 RPGFCSLPSTPTRAPKRHGLGFVDLFE-------EEPAMERVESGRDLRAKMFEKLSKEN 364

Query: 248 VVERSVASLAPATSDVAWVSGLVK 177
            ++R   S + A  DV WVS LVK
Sbjct: 365 SLDRPDPSASGAGPDVGWVSELVK 388


>emb|CBI27968.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = -3

Query: 416 SGFCSXXXXXXXXXXGMGWLDAAEGTSFPKGEEPE-ERVESGRALRAKIFEKLSKECVVE 240
           S +C           G+G++D  E       EEP  ERVESGR LRAK+FEKLSKE  ++
Sbjct: 248 SSWCVHMGSPAPKRHGLGFVDLFE-------EEPAMERVESGRDLRAKMFEKLSKENSLD 300

Query: 239 RSVASLAPATSDVAWVSGLVK 177
           R   S + A  DV WVS LVK
Sbjct: 301 RPDPSASGAGPDVGWVSELVK 321


>gb|EEE62637.1| hypothetical protein OsJ_17440 [Oryza sativa Japonica Group]
          Length = 379

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -3

Query: 323 EEPEERVESGRALRAKIFEKLSKECVVERSVASLAPATS-DVAWVSGLV 180
           E+P ERVESGRALR K+FE+LSKE  V    A+ A   + DV WVS L+
Sbjct: 330 EQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDLI 378


>gb|EAY96854.1| hypothetical protein OsI_18775 [Oryza sativa Indica Group]
          Length = 404

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -3

Query: 323 EEPEERVESGRALRAKIFEKLSKECVVERSVASLAPATS-DVAWVSGLV 180
           E+P ERVESGRALR K+FE+LSKE  V    A+ A   + DV WVS L+
Sbjct: 355 EQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDLI 403


>ref|NP_001054861.1| Os05g0195200 [Oryza sativa Japonica Group]
           gi|75261578|sp|Q6L4N4.1|C3H35_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 35; Short=OsC3H35;
           AltName: Full=Protein DELAY OF THE ONSET OF
           SENESCENCE-like gi|47777438|gb|AAT38071.1| putative zinc
           finger transcription factor [Oryza sativa Japonica
           Group] gi|113578412|dbj|BAF16775.1| Os05g0195200 [Oryza
           sativa Japonica Group]
          Length = 402

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -3

Query: 323 EEPEERVESGRALRAKIFEKLSKECVVERSVASLAPATS-DVAWVSGLV 180
           E+P ERVESGRALR K+FE+LSKE  V    A+ A   + DV WVS L+
Sbjct: 353 EQPMERVESGRALREKVFERLSKEATVSTDAAAAAAGVAPDVGWVSDLI 401


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