BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00032308
         (1912 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   724   0.0  
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   713   0.0  
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   690   0.0  
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g...   687   0.0  
ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transc...   682   0.0  
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]    679   0.0  
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]    676   0.0  
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi...   675   0.0  
ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transc...   664   0.0  
ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [S...   664   0.0  
gb|ACG24327.1| BSD domain containing protein [Zea mays]               660   0.0  
gb|AFW61224.1| BSD domain containing protein [Zea mays]               659   0.0  
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc...   656   0.0  
gb|ACF22789.1| transcription factor related protein [Brachypodiu...   620   e-175
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...   619   e-174
gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Syna...   615   e-173
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...   615   e-173
gb|EOY33213.1| BSD domain (BTF2-like transcription factors, Syna...   609   e-171
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   607   e-171
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   601   e-169

>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
            gi|548861733|gb|ERN19104.1| hypothetical protein
            AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  724 bits (1869), Expect = 0.0
 Identities = 383/580 (66%), Positives = 443/580 (76%), Gaps = 5/580 (0%)
 Frame = +2

Query: 188  VITMLAKYKTT-VKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGSK 364
            V+TM AKYK +  K+PG+ GVL M +D F F PNDP S+ KL V FR IKGHKFSK+GSK
Sbjct: 5    VVTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSK 64

Query: 365  QALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASE 544
            QALLNLTQ  +KGGGY+FEF NF DR+VCRD VG+VLG+ Q L    +DQ  S +V  ++
Sbjct: 65   QALLNLTQ--DKGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPP--SDQ--SAQVVPAQ 118

Query: 545  KATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRT 724
              T    QLS  EME RM LLREDSELQKLH++LV G VLTE+EFWATRK LLDD + + 
Sbjct: 119  PTTQHDNQLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKA 178

Query: 725  LKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEK 904
             KQR GFKSAMLADVRP TDG+TNKVTFSLTPEIIHQIF+EKPAVH+AFL FVP KM+E+
Sbjct: 179  SKQRAGFKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSER 238

Query: 905  DFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVA 1084
            DFWTKYCRAEYLHRTKNSV             VFLKHDDILA+EARRKIRRVDPTVDM A
Sbjct: 239  DFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAA 298

Query: 1085 DFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRA 1264
            D  DDY HL  HGILRDG+KE++DSE++  KRTL  D+NRHA VVLEGR LD+ELGDTR 
Sbjct: 299  DLGDDYSHLPGHGILRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRT 358

Query: 1265 VAEALARSKEAS-SVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFD 1441
            VAEALARSK+A  + +TSDE  N  R ER  +MTEIEDLQA  SLPYA LCIKDPREYFD
Sbjct: 359  VAEALARSKQAEVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFD 418

Query: 1442 FQQVNALKALGGTGSRTID--YSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLT 1615
             Q+ NA KA G TGS        L+T+ AY  L  QI EVK  G  +P+V  D ALKVL 
Sbjct: 419  SQRANAFKATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLN 478

Query: 1616 GLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYN 1795
             + QQ+SST   LGKNPQ +VLD  P RTK+E++ HW SIQELLRHFWSSYP+TT +L+ 
Sbjct: 479  DVNQQLSSTDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHA 538

Query: 1796 KVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            KV R+K AMA IY+KL  +K+ VQS+FRHQ+SLL++PMLQ
Sbjct: 539  KVNRVKDAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQ 578


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  713 bits (1840), Expect = 0.0
 Identities = 372/577 (64%), Positives = 439/577 (76%), Gaps = 7/577 (1%)
 Frame = +2

Query: 203  AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS-KQALLN 379
            A+YKT+VK+ G+ GVLKM ED F F PNDP S+ +  V+FR IKGHKFSK GS K ALLN
Sbjct: 9    ARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLN 68

Query: 380  LTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASEKATAS 559
            LTQ  EKGGGYIFEF N+ DR VCR+FVG+ L KF           S      SE++   
Sbjct: 69   LTQDSEKGGGYIFEFENYPDREVCREFVGRALAKF-----------SEASKAGSEQSAVK 117

Query: 560  I--EQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRTLKQ 733
            +  EQLST EME R+KLLREDSELQKLHK+ V   VLTE+EFWATRK LLD ++ RT KQ
Sbjct: 118  LFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQ 177

Query: 734  RTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEKDFW 913
            R GFKSAM++D++P TDG+TN+VTF+LTPEIIHQIF+EKPAVH+AFLNFVP KMTEKDFW
Sbjct: 178  RVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFW 237

Query: 914  TKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVADFS 1093
             KYCRAEYLH T+N+V             VFLKHDDILANEARRKIRRVDPT+DM AD  
Sbjct: 238  NKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQG 297

Query: 1094 DDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRAVAE 1273
            DDY+HL  HGI RDG+KE ID + +  +RTL+ D+NRHA VVLEGR +D+EL DTR VAE
Sbjct: 298  DDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAE 357

Query: 1274 ALARSKEASSV-DTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDFQQ 1450
            ALA+SK   +  + SD +   +R ER  RMTEIEDLQA   LP+A+LCIKDPR+YFD QQ
Sbjct: 358  ALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQ 417

Query: 1451 VNALKALGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTGLT 1624
             NALK LG T  GS+ I  SL+T++AY  L   ISE+K  G+ +P+V+ D ALKVL GLT
Sbjct: 418  ANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLT 477

Query: 1625 QQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNKVL 1804
            Q ISST+++LGKNPQESVLDR P  TK+E++ HW SIQELLRHFWSSYPITT YLY K  
Sbjct: 478  QNISSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKAS 537

Query: 1805 RLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            RLK AM+ IY KL+ IK+ VQSDFRHQ+SLL+QPMLQ
Sbjct: 538  RLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQ 574


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  690 bits (1780), Expect = 0.0
 Identities = 371/620 (59%), Positives = 439/620 (70%), Gaps = 50/620 (8%)
 Frame = +2

Query: 203  AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS-KQALLN 379
            A+YKT+VK+ G+ GVLKM ED F F PNDP S+ +  V+FR IKGHKFSK GS K ALLN
Sbjct: 9    ARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLN 68

Query: 380  LTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASEKATAS 559
            LTQ  EKGGGYIFEF N+ DR VCR+FVGK L KF           S      SE++   
Sbjct: 69   LTQDSEKGGGYIFEFENYPDREVCREFVGKALAKF-----------SEASKAGSEQSAVK 117

Query: 560  I--EQLSTKEMEHRMKLLRED--------------------------------------- 616
            +  EQLST EME R+KLLRED                                       
Sbjct: 118  LFDEQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIASKV 177

Query: 617  ----SELQKLHKELVFGNVLTESEFWATRKALLDDDSDRTLKQRTGFKSAMLADVRPSTD 784
                SELQKLHK+ V   VLTE+EFWATRK LLD ++ RT KQR GFKSAM++D++P TD
Sbjct: 178  KWDCSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTD 237

Query: 785  GQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEKDFWTKYCRAEYLHRTKNSVX 964
            G+TN+VTF+LTPEIIHQIF+EKPAVH+AFLNFVP KMTEKDFW KYCRAEYLH T+N+V 
Sbjct: 238  GRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVA 297

Query: 965  XXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVADFSDDYIHLSVHGILRDGNK 1144
                        VFLKHDDILA+EARRKIRRVDPT+DM AD  DDY+HL  HGI RDG+K
Sbjct: 298  AAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSK 357

Query: 1145 ETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRAVAEALARSKEASSV-DTSDE 1321
            E ID + +  +RTL+ D+NRHA VVLEGR +D+EL DTR VAEALA+SK   +  + SD 
Sbjct: 358  EIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDG 417

Query: 1322 NANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDFQQVNALKALGGT--GSRTI 1495
            +   +R ER  RMTEIEDLQA   LP+A+LCIKDPR+YFD QQ NALK LG T  GS+ I
Sbjct: 418  SVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQI 477

Query: 1496 DYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTGLTQQISSTRYNLGKNPQES 1675
              SL++++AY  L   ISE+K  G+ +P+V+ D ALKVL GLTQ ISST+++LGKNPQES
Sbjct: 478  KCSLSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQES 537

Query: 1676 VLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNKVLRLKSAMADIYQKLKAIK 1855
            VLDR P  TK+E++ HW SIQELLRHFWSSYPITT YLY K  RLK AM+ IY KL+ IK
Sbjct: 538  VLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIK 597

Query: 1856 D-VQSDFRHQISLLIQPMLQ 1912
            + VQSDFRHQ+SLL+QPMLQ
Sbjct: 598  ESVQSDFRHQVSLLVQPMLQ 617


>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
            gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
            Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
            [Oryza sativa Japonica Group]
            gi|215686948|dbj|BAG90767.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 604

 Score =  687 bits (1773), Expect = 0.0
 Identities = 358/583 (61%), Positives = 445/583 (76%), Gaps = 6/583 (1%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG  GVL+M ED F+FTP+DPRSA KL VDFR+IKGHKF+K DG
Sbjct: 1    MGSMTIGAKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60

Query: 359  SKQA--LLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKV 532
            SK A  LLNL++  +KGGGY+FEF+N  +R++ RDFV KVLGK Q     + + P    V
Sbjct: 61   SKPAPPLLNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSV 120

Query: 533  TASEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDD 712
            T++ +     EQLS  EM+ RMKLL+EDSELQKLH + V GN+L ESEFWATRK LL+D+
Sbjct: 121  TSTGE-----EQLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDE 175

Query: 713  SDRTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVK 892
            +++  KQR GFKSAMLADVRPS DG+TNKVTFSLT EIIHQIF+EKPAVHRAFL+FVP K
Sbjct: 176  ANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKK 235

Query: 893  MTEKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTV 1072
            M+EKDFWTKY RAEYL RTKN+V             +FLK+DDILA EAR KI+RVDPT+
Sbjct: 236  MSEKDFWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTL 295

Query: 1073 DMVADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELG 1252
            DM AD  DDYIHL  HGI+RDG+KETID++ + A+RTL+ D+NRHA VVLEGR+ D+EL 
Sbjct: 296  DMEADAGDDYIHLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELT 355

Query: 1253 DTRAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPRE 1432
            DT+ VAEA+ARSK+     +  ++ N +R  +  RMTEIEDLQA  SLPYA LCIKDPRE
Sbjct: 356  DTKTVAEAIARSKKEPPSSSISDDTNHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPRE 415

Query: 1433 YFDFQQVNALKALGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALK 1606
            YFD QQ NAL++LGG   G    +  L+T+DA+ +LL QIS +K+ G++ PV+QSD ALK
Sbjct: 416  YFDSQQANALRSLGGNNDGRHARNCRLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALK 475

Query: 1607 VLTGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAY 1786
            VL  L + IS +R    KNPQ+S+L + P+RT+DE+M HW +IQELL+HFWSSYPITT+ 
Sbjct: 476  VLNELNEGISRSRRLNLKNPQDSLLGQIPRRTRDELMDHWAAIQELLQHFWSSYPITTSV 535

Query: 1787 LYNKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            LYNKV R+K AM  IYQKL+ IK+  Q D RH+IS L++PM Q
Sbjct: 536  LYNKVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQ 578


>ref|XP_003573495.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Brachypodium distachyon]
          Length = 602

 Score =  682 bits (1760), Expect = 0.0
 Identities = 351/581 (60%), Positives = 435/581 (74%), Gaps = 4/581 (0%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG  GVL+M ED  +F PNDPRS  KL VDFR IKGHKF+K DG
Sbjct: 1    MGTMTIGAKYKTTLKDPGTTGVLRMNEDKLAFIPNDPRSLMKLNVDFRTIKGHKFNKVDG 60

Query: 359  SKQA--LLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKV 532
            SK    LLNL++  +KGGGY+FEF+N  +R++CRDFV +VLGK Q +   + + P    V
Sbjct: 61   SKPTPPLLNLSKDSDKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGIVPPRPNAPPEKSV 120

Query: 533  TASEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDD 712
             A     A  EQLS+ EME RMKLLREDSELQKLHK+ V GN+L ESEFWATRK LLDD+
Sbjct: 121  AA-----AGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDE 175

Query: 713  SDRTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVK 892
            ++   KQ+ GF+S MLADVRPS DGQTNKVTFSLT EIIHQIF+EKPAVHRAFL++VP K
Sbjct: 176  ANTASKQKPGFRSVMLADVRPSADGQTNKVTFSLTNEIIHQIFAEKPAVHRAFLDYVPKK 235

Query: 893  MTEKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTV 1072
            ++EKDFWTKYCRAEYL RTKN++             +FL++DDI+A EA+ KI+RVDPT+
Sbjct: 236  LSEKDFWTKYCRAEYLLRTKNTLAAKAEAADDEELAIFLRNDDIVAKEAKLKIKRVDPTL 295

Query: 1073 DMVADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELG 1252
            DM AD  DDYIHL  HGILRDG++ET D++++ A+RTL+ D+NRHA VVLEGR  D+E+ 
Sbjct: 296  DMEADAGDDYIHLPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRKTDVEIA 355

Query: 1253 DTRAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPRE 1432
            D + VAEALARSK  +   +  ++A+ +R  +  RMTEIEDLQA  SLPYA LCIKDPRE
Sbjct: 356  DAKTVAEALARSKTETPCSSIADDASHERLLKVARMTEIEDLQAPRSLPYAPLCIKDPRE 415

Query: 1433 YFDFQQVNALKALGGTGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            YFD QQ N L+ LGG G +    SL+T+DA+ +L+ QIS VK+  +  PVVQS+ ALKVL
Sbjct: 416  YFDSQQANPLRPLGGDGRKARSCSLSTDDAFRHLMDQISSVKVNKLSCPVVQSNVALKVL 475

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
              L + IS +R    KNPQ+S+L R P RT+DE+M HW +IQELLRHFWSSYPITT  LY
Sbjct: 476  NELNEGISRSRRLNLKNPQDSLLGRLPHRTRDELMDHWTAIQELLRHFWSSYPITTTVLY 535

Query: 1793 NKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            NK+ R+K AM  IYQKL+ IK+  Q D RH+IS L++PM Q
Sbjct: 536  NKIQRVKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQ 576


>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  679 bits (1752), Expect = 0.0
 Identities = 361/584 (61%), Positives = 440/584 (75%), Gaps = 7/584 (1%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG  GVL+M ED   FTPNDPRS  KL VDFR+IKGHKF+K DG
Sbjct: 1    MGTMTIGAKYKTTLKDPGHGGVLRMSEDKLIFTPNDPRSLMKLSVDFRSIKGHKFNKVDG 60

Query: 359  SKQA--LLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKV 532
            SK    LLNL++V +KGGGYIFEF+N  +R++CRDFV +VLGK Q     + + P     
Sbjct: 61   SKPTPPLLNLSKVSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARPNVPP---- 116

Query: 533  TASEKATASI--EQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLD 706
               EK   S   EQLS+ EME RMKLLREDSELQKLHK+ V GN+L ESEFWATRK LLD
Sbjct: 117  ---EKLAVSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLD 173

Query: 707  DDSDRTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVP 886
            D+++++ KQ+ GFKSAMLADVRPS DGQTNKVTFSLT EIIHQIF+EKPAVHRAFL++VP
Sbjct: 174  DETNKSSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVP 233

Query: 887  VKMTEKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDP 1066
             K++EKDFWTKYCRAEYL RTKN++             +FLK+DDILA EA+ KI+RVDP
Sbjct: 234  KKLSEKDFWTKYCRAEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDP 293

Query: 1067 TVDMVADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIE 1246
            T+DM AD  DDYIHL  HGILRDG++ET D++++ A+RTL+ D+NRHA VVLEGR+ DIE
Sbjct: 294  TLDMEADAGDDYIHLPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRSTDIE 353

Query: 1247 LGDTRAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDP 1426
              DT+ VAEALARSK+     +  ++A+ +R  +A RMTE+EDLQA  SLPYA LCIKDP
Sbjct: 354  STDTKTVAEALARSKKEPPPSSVADDASHERLVKAARMTELEDLQAPRSLPYAPLCIKDP 413

Query: 1427 REYFDFQQVNALKALGGT-GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTAL 1603
            REYFD QQ NAL+ LG   G +    SL+ +DA+ +L+ QIS VK+   + PVVQ+D AL
Sbjct: 414  REYFDSQQANALRPLGNNDGRKARSCSLSADDAFRHLMDQISSVKM---NCPVVQADVAL 470

Query: 1604 KVLTGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTA 1783
            KVL  L + IS +R    KNPQ+S+L R P RT+DE+M HW +IQELLRHFWSSYPITTA
Sbjct: 471  KVLNELNEGISRSRRLNLKNPQDSLLGRLPHRTRDELMDHWTAIQELLRHFWSSYPITTA 530

Query: 1784 YLYNKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
             L NKV RLK AM  IYQKL+ IK+  Q D RH+IS L++PM Q
Sbjct: 531  VLSNKVQRLKEAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQ 574


>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  676 bits (1744), Expect = 0.0
 Identities = 358/578 (61%), Positives = 436/578 (75%), Gaps = 5/578 (0%)
 Frame = +2

Query: 194  TMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DGSKQ- 367
            T+ AKYK T+K+ G  GVL+M ED F+FTPNDPRS  KL VDF+ IKGHKF+K DGSK  
Sbjct: 1    TIGAKYKATLKDRGTGGVLRMSEDKFTFTPNDPRSLMKLSVDFQTIKGHKFNKVDGSKPT 60

Query: 368  -ALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASE 544
             ALLNL++  +KGGGYIFEF+N  +R++CRDFV +VLGK+Q     + + P      ++ 
Sbjct: 61   PALLNLSKDSDKGGGYIFEFDNVGNRDLCRDFVARVLGKYQGTVPARPNVPPELSAVSTG 120

Query: 545  KATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRT 724
                  EQLS+ EME RMKLLREDSELQKLHK+ V GN+L ESEFWATRK LLDD++ + 
Sbjct: 121  P-----EQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETSKG 175

Query: 725  LKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEK 904
             KQ+ GFKSAMLADVRPS DGQTNKVTFSLT EIIHQIF+EKPAVHRAFL++VP K++EK
Sbjct: 176  SKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEK 235

Query: 905  DFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVA 1084
            DFWTKYCRAEYL RTKN++             +FLK+DDILA EA+ KI+RVDPT+DM A
Sbjct: 236  DFWTKYCRAEYLLRTKNTLAAKAEAAEDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEA 295

Query: 1085 DFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRA 1264
            D  DDYIHL  HGILRDG++ET D++++ A+RTL+ D+NRHA VVLEGR+ DIE  DT+ 
Sbjct: 296  DAGDDYIHLPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRSADIESTDTKT 355

Query: 1265 VAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDF 1444
            VAEALARSK+     +  ++A+ +R  +A RMTEIEDLQA  SLPYA LCIKDPREYFD 
Sbjct: 356  VAEALARSKKEPPPSSVADDASHERLVKAARMTEIEDLQAPRSLPYALLCIKDPREYFDS 415

Query: 1445 QQVNALKALGGT-GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTGL 1621
            QQ NAL+ LG   G +    SL+T+DA+ +L+ QIS VK+   + PVVQSD ALKVL  L
Sbjct: 416  QQANALRPLGSNDGRKARSCSLSTDDAFRHLMDQISSVKM---NCPVVQSDVALKVLNEL 472

Query: 1622 TQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNKV 1801
             + IS +R    KNPQ+S+L R P RT+DE+M HWM+IQELLRHFWSSYPITT  L NKV
Sbjct: 473  NEGISRSRRLNLKNPQDSLLGRLPHRTRDELMDHWMAIQELLRHFWSSYPITTTVLCNKV 532

Query: 1802 LRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
             RLK AM  IYQKL+ IK+  Q D RH+IS L++PM Q
Sbjct: 533  QRLKEAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQ 570


>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
            gi|222640385|gb|EEE68517.1| hypothetical protein
            OsJ_26954 [Oryza sativa Japonica Group]
          Length = 625

 Score =  675 bits (1741), Expect = 0.0
 Identities = 358/604 (59%), Positives = 445/604 (73%), Gaps = 27/604 (4%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG  GVL+M ED F+FTP+DPRSA KL VDFR+IKGHKF+K DG
Sbjct: 1    MGSMTIGAKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60

Query: 359  SKQA--LLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKV 532
            SK A  LLNL++  +KGGGY+FEF+N  +R++ RDFV KVLGK Q     + + P    V
Sbjct: 61   SKPAPPLLNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSV 120

Query: 533  TASEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDD 712
            T++ +     EQLS  EM+ RMKLL+EDSELQKLH + V GN+L ESEFWATRK LL+D+
Sbjct: 121  TSTGE-----EQLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDE 175

Query: 713  SDRTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVK 892
            +++  KQR GFKSAMLADVRPS DG+TNKVTFSLT EIIHQIF+EKPAVHRAFL+FVP K
Sbjct: 176  ANKGSKQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKK 235

Query: 893  MTEKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTV 1072
            M+EKDFWTKY RAEYL RTKN+V             +FLK+DDILA EAR KI+RVDPT+
Sbjct: 236  MSEKDFWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTL 295

Query: 1073 DMVADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELG 1252
            DM AD  DDYIHL  HGI+RDG+KETID++ + A+RTL+ D+NRHA VVLEGR+ D+EL 
Sbjct: 296  DMEADAGDDYIHLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELT 355

Query: 1253 DTRAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPRE 1432
            DT+ VAEA+ARSK+     +  ++ N +R  +  RMTEIEDLQA  SLPYA LCIKDPRE
Sbjct: 356  DTKTVAEAIARSKKEPPSSSISDDTNHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPRE 415

Query: 1433 YFDFQQVNALKALGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALK 1606
            YFD QQ NAL++LGG   G    +  L+T+DA+ +LL QIS +K+ G++ PV+QSD ALK
Sbjct: 416  YFDSQQANALRSLGGNNDGRHARNCRLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALK 475

Query: 1607 ---------------------VLTGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLH 1723
                                 VL  L + IS +R    KNPQ+S+L + P+RT+DE+M H
Sbjct: 476  KLMMKAAFEDHVDIQITCDWRVLNELNEGISRSRRLNLKNPQDSLLGQIPRRTRDELMDH 535

Query: 1724 WMSIQELLRHFWSSYPITTAYLYNKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQ 1900
            W +IQELL+HFWSSYPITT+ LYNKV R+K AM  IYQKL+ IK+  Q D RH+IS L++
Sbjct: 536  WAAIQELLQHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVK 595

Query: 1901 PMLQ 1912
            PM Q
Sbjct: 596  PMTQ 599


>ref|XP_004972829.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like isoform X1 [Setaria italica]
          Length = 600

 Score =  664 bits (1714), Expect = 0.0
 Identities = 342/581 (58%), Positives = 440/581 (75%), Gaps = 4/581 (0%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG PG+L+M +D F+FTPNDPRSA KL V+FR+IKGHKF+K DG
Sbjct: 1    MGSLTIGAKYKTTLKDPGTPGILRMNDDKFTFTPNDPRSAMKLNVEFRSIKGHKFNKVDG 60

Query: 359  SKQALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTA 538
            +K ALLNL++  +KGGGY+FEF+N  +R++CRDFV +VLGK Q +    T  P       
Sbjct: 61   NKPALLNLSKDSDKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGMPPRPTMPPEISV--- 117

Query: 539  SEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSD 718
                +A +EQLS  E+E R+KLLREDSELQKLHK+ V GN+L ESEFWATRK LLDD ++
Sbjct: 118  ---PSAGMEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDVAN 174

Query: 719  RTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMT 898
            +  KQ+ GFK+AM +DVRPS DG+TNKVTF+LTPE+IHQIF+EKPAV RAFL+FVP KMT
Sbjct: 175  KASKQKPGFKTAM-SDVRPSADGRTNKVTFNLTPEMIHQIFAEKPAVRRAFLDFVPKKMT 233

Query: 899  EKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDM 1078
            + +FW KYCRAEYL RTKN+              VFLK+DDIL  EA+ KI++VDPT+DM
Sbjct: 234  DLEFWRKYCRAEYLLRTKNTAAAAAEAAEDEELAVFLKNDDILVKEAKLKIKQVDPTLDM 293

Query: 1079 VADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDT 1258
             AD  DDYIHL  HGILRDG+KET+D++++FA+RTL+ ++NRHA VVLEG A D+EL D 
Sbjct: 294  EADAGDDYIHLPDHGILRDGSKETVDNDSEFARRTLSQELNRHAAVVLEGIASDVELTDA 353

Query: 1259 RAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYF 1438
            ++VAEALARSK+     ++ ++ + +R  +  RMTEIEDLQA  SLPYA LCIKDPREYF
Sbjct: 354  KSVAEALARSKKEPPSTSAVDDTSHERLLKVARMTEIEDLQAPRSLPYAPLCIKDPREYF 413

Query: 1439 DFQQVNALKALGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            D QQ NAL++LG +  G ++ + SL+ E+A+++L  QIS +K+   +  V+QSD A+KVL
Sbjct: 414  DSQQANALRSLGASNDGRKSRNCSLSIEEAFHHLTDQISSIKVNKSNCTVIQSDMAVKVL 473

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
              L + IS +R    KNPQE +L R P+ T+DE+M HW +IQELLRHFWSSYPIT+  LY
Sbjct: 474  NELNEGISRSRRLNLKNPQEGLLGRVPQHTRDELMDHWTAIQELLRHFWSSYPITSTVLY 533

Query: 1793 NKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            NKV R+K AM  IYQKL+AIK+  Q D RH+IS L++PM Q
Sbjct: 534  NKVQRVKDAMTQIYQKLQAIKESAQPDVRHEISRLVKPMTQ 574


>ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [Sorghum bicolor]
            gi|241940216|gb|EES13361.1| hypothetical protein
            SORBIDRAFT_07g003540 [Sorghum bicolor]
          Length = 600

 Score =  664 bits (1713), Expect = 0.0
 Identities = 340/581 (58%), Positives = 438/581 (75%), Gaps = 4/581 (0%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG PG+L+M +D F+FTPNDPRSA K  VDFR IKGHKF+K +G
Sbjct: 1    MGSMTIGAKYKTTIKDPGTPGILRMNDDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG 60

Query: 359  SKQALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTA 538
            +K ALLNL++  +K GGYIFEF+N  +R++CRDFV +VLGK Q      T  P       
Sbjct: 61   NKAALLNLSK-EDKAGGYIFEFDNVGNRDLCRDFVARVLGKHQG-----TVPPRPTVAPE 114

Query: 539  SEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSD 718
            +  A+A++EQLS  E+E R+KLLREDSELQKLHK+ V GN+L ESEFWATRK LLDD+++
Sbjct: 115  NSVASAALEQLSVAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEAN 174

Query: 719  RTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMT 898
            +  KQR GFK++ L D++P+TDG+TNKVTF +TPE+IHQIF+EKPAV RA+L++VP KM 
Sbjct: 175  KRSKQRAGFKNS-LVDIKPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDYVPKKMV 233

Query: 899  EKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDM 1078
            E  FW KYCRAEYL RTKN+              +FLK+DDILA E   +I+RVDPT+DM
Sbjct: 234  ETRFWEKYCRAEYLFRTKNTAAATAEAAGDEELAIFLKNDDILAKEFWLQIKRVDPTLDM 293

Query: 1079 VADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDT 1258
             AD  DDYIHL  HGI RDGNKETID++++ A+RTL+ D+NRHA VVLEGR+LD+E  D 
Sbjct: 294  EADTGDDYIHLPDHGIHRDGNKETIDADSELARRTLSQDLNRHAAVVLEGRSLDVESTDP 353

Query: 1259 RAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYF 1438
            + +AEALARSK+     + D++AN +R  +  RMTEIEDLQA  SLPYA LCIKDPREYF
Sbjct: 354  KTLAEALARSKKEPPSTSIDDDANHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYF 413

Query: 1439 DFQQVNALKALGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            D QQ NAL++LGG+  G +    SL+TE+A+++L+ Q+S +K+  ++ P++QSD ALKVL
Sbjct: 414  DSQQANALRSLGGSNDGRKARTCSLSTEEAFHHLMDQMSSIKVNKLNCPIIQSDMALKVL 473

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
              L + IS +R    KNPQE +L + P+ T+DE+M HW +IQELLRHFWSSYPIT+A LY
Sbjct: 474  NELNEGISRSRRLNLKNPQEGLLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLY 533

Query: 1793 NKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            NKV R+K AM  IYQKL+ IK+  Q D RH+IS L++PM Q
Sbjct: 534  NKVQRVKEAMTQIYQKLQLIKESAQPDVRHEISRLVKPMTQ 574


>gb|ACG24327.1| BSD domain containing protein [Zea mays]
          Length = 600

 Score =  660 bits (1702), Expect = 0.0
 Identities = 340/581 (58%), Positives = 437/581 (75%), Gaps = 4/581 (0%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG PG+L+M  D F+FTPNDPRSA K  VDFR IKGHKF+K +G
Sbjct: 1    MGSMTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG 60

Query: 359  SKQALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTA 538
            +K ALLNL++  +K GGYIFEF+N  +R+ CRDFV +VLGK Q +   +        V  
Sbjct: 61   NKAALLNLSK-EDKAGGYIFEFDNVGNRDQCRDFVARVLGKHQGIVPPRPTVAPENSV-- 117

Query: 539  SEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSD 718
               A+A++EQLS  E+E R+KLLREDSELQKLHK+ V GN+L ESEFWATRK LLDD+++
Sbjct: 118  ---ASAALEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEAN 174

Query: 719  RTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMT 898
            +  KQ+ GFKSA L D+RP+TDG+TNKVTF +TPE+IHQIF+EKPAV RA+L+FVP KM+
Sbjct: 175  KRSKQKPGFKSA-LVDIRPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDFVPKKMS 233

Query: 899  EKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDM 1078
            E  FW KYCRAEYL RTKN+              +FLK+DDILA EA+ KI+RVDPT+DM
Sbjct: 234  ETRFWEKYCRAEYLVRTKNTAAATAEAAGNEELAIFLKNDDILAKEAKLKIKRVDPTLDM 293

Query: 1079 VADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDT 1258
             AD  DDYIHL  HGI RDG+KET+D++++ A+RTL+ D+NRHA VVLEGR+LD+E  D 
Sbjct: 294  EADTGDDYIHLPDHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLDVESSDP 353

Query: 1259 RAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYF 1438
            + +AEALARSK+     ++ ++ N +R  +  RMTEIEDLQA  SL YA LCIKDPREYF
Sbjct: 354  KTLAEALARSKKEPPSTSNVDDDNHERLMKVARMTEIEDLQAPRSLLYAPLCIKDPREYF 413

Query: 1439 DFQQVNALKALGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            D QQ NAL++LGG+  G +    SL+TE+ +++L+ Q+S VK+  ++ P+VQSD ALKVL
Sbjct: 414  DSQQANALRSLGGSNGGRKAHSCSLSTEEVFHHLMDQMSSVKVNRLNCPIVQSDMALKVL 473

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
              L + IS +R    KNPQE +L + P+ T+DE+M HW +IQELLRHFWSSYPIT+A LY
Sbjct: 474  NELNEGISRSRRLNLKNPQEGLLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLY 533

Query: 1793 NKVLRLKSAMADIYQKLKAIKDV-QSDFRHQISLLIQPMLQ 1912
            NKV R+K AM  IYQKL+ IK++ Q D RH+IS L++PM Q
Sbjct: 534  NKVQRVKEAMTQIYQKLQLIKELAQPDVRHEISRLVKPMTQ 574


>gb|AFW61224.1| BSD domain containing protein [Zea mays]
          Length = 600

 Score =  659 bits (1700), Expect = 0.0
 Identities = 340/581 (58%), Positives = 437/581 (75%), Gaps = 4/581 (0%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG PG+L+M  D F+FTPNDPRSA K  VDFR IKGHKF+K +G
Sbjct: 1    MGSMTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG 60

Query: 359  SKQALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTA 538
            +K ALLNL++  +K GGYIFEF+N  +R+ CRDFV +VLGK Q +   +        V  
Sbjct: 61   NKAALLNLSK-EDKAGGYIFEFDNVGNRDQCRDFVARVLGKHQGIVPPRPTVAPENSV-- 117

Query: 539  SEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSD 718
               A+A++EQLS  E+E R+KLLREDSELQKLHK+ V GN+L ESEFWATRK LLDD+++
Sbjct: 118  ---ASAALEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEAN 174

Query: 719  RTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMT 898
            +  KQ+ GFKSA L D+RP+TDG+TNKVTF +TPE+IHQIF+EKPAV RA+L+FVP KM+
Sbjct: 175  KRSKQKPGFKSA-LVDIRPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDFVPKKMS 233

Query: 899  EKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDM 1078
            E  FW KYCRAEYL RTKN+              +FLK+DDILA EA+ KI+RVDPT+DM
Sbjct: 234  ETRFWEKYCRAEYLVRTKNTAAATAEAAGDEELAIFLKNDDILAKEAKLKIKRVDPTLDM 293

Query: 1079 VADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDT 1258
             AD  DDYIHL  HGI RDG+KET+D++++ A+RTL+ D+NRHA VVLEGR+LD+E  D 
Sbjct: 294  EADTGDDYIHLPDHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLDVESTDP 353

Query: 1259 RAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYF 1438
            + +AEALARSK+     ++ ++ N +R  +  RMTEIEDLQA  SL YA LCIKDPREYF
Sbjct: 354  KTLAEALARSKKEPPSTSNVDDDNHERLMKVARMTEIEDLQAPRSLLYAPLCIKDPREYF 413

Query: 1439 DFQQVNALKALGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            D QQ NAL++LGG+  G +    SL+TE+ +++L+ Q+S VK+  ++ P+VQSD ALKVL
Sbjct: 414  DSQQANALRSLGGSNGGRKAHSCSLSTEEVFHHLMDQMSSVKVNRLNCPIVQSDMALKVL 473

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
              L + IS +R    KNPQE +L + P+ T+DE+M HW +IQELLRHFWSSYPIT+A LY
Sbjct: 474  NELNEGISRSRRLNLKNPQEGLLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLY 533

Query: 1793 NKVLRLKSAMADIYQKLKAIKDV-QSDFRHQISLLIQPMLQ 1912
            NKV R+K AM  IYQKL+ IK++ Q D RH+IS L++PM Q
Sbjct: 534  NKVQRVKEAMTQIYQKLQLIKELAQPDVRHEISRLVKPMTQ 574


>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Oryza brachyantha]
          Length = 621

 Score =  656 bits (1693), Expect = 0.0
 Identities = 350/571 (61%), Positives = 423/571 (74%), Gaps = 6/571 (1%)
 Frame = +2

Query: 218  TVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DGSKQA--LLNLTQ 388
            T K+  I    +M ED F+FTPNDPRSA KL VDFR+IKGHKF+K DG+K A  LLNL++
Sbjct: 35   TPKQNVIGTKCRMNEDKFTFTPNDPRSAMKLNVDFRSIKGHKFNKVDGNKPAPPLLNLSK 94

Query: 389  VPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASEKATASIEQ 568
              +KGGGYIFEF N   R++ RDFV +VLGK Q      T  P    VT+++      EQ
Sbjct: 95   DSDKGGGYIFEFENVTSRDLSRDFVARVLGKQQG-----TIPPPENSVTSTDP-----EQ 144

Query: 569  LSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRTLKQRTGFK 748
            LS  EM+ RMKLL EDSELQKLH++LV GN+L ESEFWATRK LLDD++++  KQR GFK
Sbjct: 145  LSAAEMQRRMKLLHEDSELQKLHRKLVIGNILQESEFWATRKNLLDDEANKGSKQRPGFK 204

Query: 749  SAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEKDFWTKYCR 928
            SAMLADVRPS DG+TNKVTFSLT EIIHQIF+EKPAVHRAFLNFVP KM+EKDFWTKY R
Sbjct: 205  SAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLNFVPKKMSEKDFWTKYFR 264

Query: 929  AEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVADFSDDYIH 1108
            AEYL RTKN+V             VFLK+DDILA EAR KI+RVDPT+DM AD  DDYIH
Sbjct: 265  AEYLLRTKNTVAAAAEAAEDEELAVFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIH 324

Query: 1109 LSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRAVAEALARS 1288
            L  HGI+RDG+KETI+++ + A+RTL+ D+NRHA VVLEGR+ D+EL DT+ VAEALARS
Sbjct: 325  LPDHGIIRDGSKETIENDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEALARS 384

Query: 1289 KEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDFQQVNALKA 1468
            K      +  ++ + +R  +  RMTEIEDLQA  S+PYA LCIKDPREYFD QQ NAL++
Sbjct: 385  KREPPPSSISDDTSHERLVKVARMTEIEDLQAPRSVPYAPLCIKDPREYFDSQQANALRS 444

Query: 1469 LGGT--GSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTGLTQQISST 1642
            LGG   G    +  L+  DA+ +LL QIS +K+ G++ PVVQSD A KVL  L   IS T
Sbjct: 445  LGGNNDGRHARNCRLSAHDAFDHLLGQISSIKVNGLNYPVVQSDVAFKVLNELNDGISRT 504

Query: 1643 RYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNKVLRLKSAM 1822
            R    KNPQ+S+L + P+ T+DE+M HW +IQELLRHFWSSYPITT+ LYNKV R+K AM
Sbjct: 505  RRLNLKNPQDSLLGQIPRHTRDELMDHWTAIQELLRHFWSSYPITTSVLYNKVQRIKDAM 564

Query: 1823 ADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
              IYQKL+ IK+  Q D RH+IS L++PM Q
Sbjct: 565  TQIYQKLQNIKESAQPDVRHEISQLVKPMTQ 595


>gb|ACF22789.1| transcription factor related protein [Brachypodium distachyon]
          Length = 576

 Score =  620 bits (1598), Expect = e-175
 Identities = 329/581 (56%), Positives = 412/581 (70%), Gaps = 4/581 (0%)
 Frame = +2

Query: 182  MAVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSK-DG 358
            M  +T+ AKYKTT+K+PG  GVL+M ED  +F PNDPRS  KL VDFR IKGHKF+K DG
Sbjct: 1    MGTMTIGAKYKTTLKDPGTTGVLRMNEDKLAFIPNDPRSLMKLNVDFRTIKGHKFNKVDG 60

Query: 359  SKQA--LLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKV 532
            SK    LLNL++  +KGGGY+FEF+N  +R++CRDFV +VLGK Q +   + + P    V
Sbjct: 61   SKPTPPLLNLSKDSDKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGIVPPRPNAPPEKSV 120

Query: 533  TASEKATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDD 712
             A     A  EQLS+ EME RMKLLREDSELQKLHK+ V GN+L ESEFWATRK LLDD+
Sbjct: 121  AA-----AGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDE 175

Query: 713  SDRTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVK 892
            ++   KQ+ GF+S MLADVRPS DGQTNKVTFSLT EIIHQIF+EKPAVHRAFL++VP K
Sbjct: 176  ANTASKQKPGFRSVMLADVRPSADGQTNKVTFSLTNEIIHQIFAEKPAVHRAFLDYVPKK 235

Query: 893  MTEKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTV 1072
            ++EKDFWTKYCRAEYL RTKN++             +FL++DDI+A EA+ KI+RVDPT+
Sbjct: 236  LSEKDFWTKYCRAEYLLRTKNTLAAKAEAADDEELAIFLRNDDIVAKEAKLKIKRVDPTL 295

Query: 1073 DMVADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELG 1252
            DM AD  DDYIHL  HGILRDG++ET D++++ A+RTL+ D+NRHA VVLEGR  D+E+ 
Sbjct: 296  DMEADAGDDYIHLPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRKTDVEIA 355

Query: 1253 DTRAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPRE 1432
            D + VAEALARSK  +   +  ++A+ +R  +  RMTEIEDLQA  SLPYA LCIKDPRE
Sbjct: 356  DAKTVAEALARSKTETPCSSIADDASHERLLKVARMTEIEDLQAPRSLPYAPLCIKDPRE 415

Query: 1433 YFDFQQVNALKALGGTGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            YFD QQ N L+ LGG G +    SL+T+DA+ +L+ QIS VK+  +  PVVQS+ ALKVL
Sbjct: 416  YFDSQQANPLRPLGGDGRKARSCSLSTDDAFRHLMDQISSVKVNKLSCPVVQSNVALKVL 475

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
              L + IS +R    KNPQ+S+L R P RT+DE+M                         
Sbjct: 476  NELNEGISRSRRLNLKNPQDSLLGRLPHRTRDELM------------------------- 510

Query: 1793 NKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
              + R+K AM  IYQKL+ IK+  Q D RH+IS L++PM Q
Sbjct: 511  -DIQRVKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQ 550


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Citrus sinensis]
          Length = 597

 Score =  619 bits (1596), Expect = e-174
 Identities = 328/581 (56%), Positives = 423/581 (72%), Gaps = 5/581 (0%)
 Frame = +2

Query: 185  AVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS- 361
            A +T  AKYK +VK+PG PG L+M +    F P++  S  KL V+F++I+GHK++K+GS 
Sbjct: 5    AQVTKRAKYKISVKDPGTPGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKEGSN 64

Query: 362  KQALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTAS 541
            K  L+NL     +GG YIFEF+++AD +VCRDFV KVL K +       + P++    A 
Sbjct: 65   KPPLINLANA--QGGSYIFEFDSYADLHVCRDFVSKVLEKSK-------ETPNA----AL 111

Query: 542  EKATASI--EQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDS 715
            EK+   +  EQLS +EM+ R+KLL+E+SELQKLH++ V GN+LTE+EFWA RK LLD D 
Sbjct: 112  EKSAIKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDIDP 171

Query: 716  DRTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKM 895
             +  KQR GFKSAM++D+RP+TDG+TNKVTFSLTPEII QIF+EKPAVHRAFLNFVP KM
Sbjct: 172  SKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKM 231

Query: 896  TEKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVD 1075
            TE +FWTKYCRAEYL RTKN               VFLK DDILANE R+KIRRVDPT+D
Sbjct: 232  TEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLD 291

Query: 1076 MVADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGD 1255
            M AD  DDY HL  HGI RDG KE+ + +++  +RTL  D+NRHA VVLEGR +D+E  D
Sbjct: 292  MEADEGDDYTHLPDHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVERED 351

Query: 1256 -TRAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPRE 1432
             TRA+AEALARSK  +  + +D NAN +R +R  R+ EIEDLQA H LP A L IKD RE
Sbjct: 352  STRALAEALARSKRGN--EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDARE 409

Query: 1433 YFDFQQVNALKALGGTGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            YFD QQ N LKA       ++  SL+ ++AY  +   ISE+K  G+ +P+V  + ALKV 
Sbjct: 410  YFDSQQANTLKA-SRDAQASMKCSLSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVY 468

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
            +GLT  ISS +Y+LGKNP+E+VLDR P  TK++++ HWMSIQELL+HFWSSYPITT YLY
Sbjct: 469  SGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLY 528

Query: 1793 NKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            +KV RLK A+++IY +L+ +K+ + +D RHQ+SLL++PM Q
Sbjct: 529  SKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQ 569


>gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Synapse-associated
            proteins and DOS2-like proteins), putative isoform 1
            [Theobroma cacao]
          Length = 646

 Score =  615 bits (1587), Expect = e-173
 Identities = 338/628 (53%), Positives = 419/628 (66%), Gaps = 54/628 (8%)
 Frame = +2

Query: 191  ITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS-KQ 367
            +T  AKYKTT+K+PG PG L+M  +   F P++P+SA KL V+FR IKG K +K+GS K 
Sbjct: 6    VTKRAKYKTTIKDPGTPGTLRMTLEKILFVPHNPKSAGKLDVEFRFIKGQKHTKEGSSKP 65

Query: 368  ALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASEK 547
              LNLT    + G +IFEF N++D   CRDFVGKVL K             SG+V+    
Sbjct: 66   PWLNLTN--NQNGSFIFEFENYSDLQDCRDFVGKVLAK-------------SGEVSEKPT 110

Query: 548  ATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRTL 727
             T   EQLS  EME R+KLLREDSELQKLHK+ V   VLTE+EFWATRK LLD ++++  
Sbjct: 111  VTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREANKKT 170

Query: 728  KQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEKD 907
            KQR GFKSAM++D++PSTDG+TNKVTF+LTPEII QIF+EKPAVHRAFL +VP KM+E+D
Sbjct: 171  KQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERD 230

Query: 908  FWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVAD 1087
            FWTKY RAEYLH TKNSV             VFLK DDILA+E+R KIRRVDPT+DM AD
Sbjct: 231  FWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDAD 290

Query: 1088 FSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRAV 1267
              DDY HL  HGI RDG+KE  +SEN+  +RTL+ D+NRHA VVLEGRA+D+EL DTR+V
Sbjct: 291  EGDDYTHLPDHGIFRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSV 350

Query: 1268 AEALARSK-EASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDF 1444
            AEALARSK E+S+   S  + + +R +R  RMTEIEDLQA ++LP A LCIKDPR+YFD 
Sbjct: 351  AEALARSKQESSTKGESYGDTSRERLDRVSRMTEIEDLQAPNNLPLAPLCIKDPRDYFDS 410

Query: 1445 QQVNALKALGG--TGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTG 1618
            QQVNAL+  G    G+  I  SL++++ Y  L + IS +K  G+ +P+V+ + A +V   
Sbjct: 411  QQVNALRTSGDELAGTEQIKCSLSSQEVYGSLRESISVIKAMGLKDPIVKPEVAHQVFDA 470

Query: 1619 LTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNK 1798
            LTQ IS+T+YN+GKNPQESVLDR PK+ K+E++ HW SI ELLRHFW+SYPITT+YLY K
Sbjct: 471  LTQSISTTKYNIGKNPQESVLDRLPKKIKEELLHHWTSILELLRHFWASYPITTSYLYTK 530

Query: 1799 VLRLKSAMADIYQKLKAIK----------------------------------------- 1855
            V          YQKL+A K                                         
Sbjct: 531  VNAALVLTLLSYQKLEAGKQTEGCHVTYLSTARVVLSNYPQVPFISSLLFYLLGSSDAKA 590

Query: 1856 ---------DVQSDFRHQISLLIQPMLQ 1912
                      V SD RHQ+SLLI+PM Q
Sbjct: 591  SYVWMEIKGSVPSDLRHQVSLLIRPMHQ 618


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555943|gb|ESR65957.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score =  615 bits (1586), Expect = e-173
 Identities = 326/581 (56%), Positives = 422/581 (72%), Gaps = 5/581 (0%)
 Frame = +2

Query: 185  AVITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS- 361
            A +T  AKYK +VK+PG  G L+M +    F P++  S  KL V+F++I+GHK++K+GS 
Sbjct: 5    AQVTKRAKYKISVKDPGTTGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKEGSN 64

Query: 362  KQALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTAS 541
            K  L+NL     +GG YIFEF++++D +VCRDFV KVL K +       + P++    A 
Sbjct: 65   KPPLINLANA--QGGSYIFEFDSYSDLHVCRDFVSKVLEKSK-------ETPNA----AL 111

Query: 542  EKATASI--EQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDS 715
            EK+   +  EQLS +EM+ R+KLL+E+SELQKLH++ V GN+LTE+EFWA RK LLD D 
Sbjct: 112  EKSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDP 171

Query: 716  DRTLKQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKM 895
             +  KQR GFKSAM++D+RP+TDG+TNKVTFSLTPEII QIF+EKPAVHRAFLNFVP KM
Sbjct: 172  SKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKM 231

Query: 896  TEKDFWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVD 1075
            TE +FWTKYCRAEYL RTKN               VFLK DDILANE R+KIRRVDPT+D
Sbjct: 232  TEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLD 291

Query: 1076 MVADFSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGD 1255
            M AD  DDY HL  HGI RDG KE+ + +++  +RTL  D+NRHA VVLEGR +D+E  D
Sbjct: 292  MEADEGDDYTHLPDHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVERED 351

Query: 1256 -TRAVAEALARSKEASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPRE 1432
             TRA+AEALARSK  +  + +D NAN +R +R  R+ EIEDLQA H LP A L IKD RE
Sbjct: 352  STRALAEALARSKRGN--EGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDARE 409

Query: 1433 YFDFQQVNALKALGGTGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVL 1612
            YFD QQ N LKA       ++  SL+ ++AY  +   ISE+K  G+ +P+V  + ALKV 
Sbjct: 410  YFDSQQANTLKA-SRDSQASMKCSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVY 468

Query: 1613 TGLTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLY 1792
            +GLT  ISS +Y+LGKNP+E+VLDR P  TK++++ HWMSIQELL+HFWSSYPITT YLY
Sbjct: 469  SGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLY 528

Query: 1793 NKVLRLKSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            +KV RLK A+++IY +L+ +K+ + +D RHQ+SLL++PM Q
Sbjct: 529  SKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQ 569


>gb|EOY33213.1| BSD domain (BTF2-like transcription factors, Synapse-associated
            proteins and DOS2-like proteins) isoform 3 [Theobroma
            cacao]
          Length = 549

 Score =  609 bits (1570), Expect = e-171
 Identities = 318/540 (58%), Positives = 396/540 (73%), Gaps = 4/540 (0%)
 Frame = +2

Query: 191  ITMLAKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKDGS-KQ 367
            +T  AKYKTT+K+PG PG L+M  +   F P++P+SA KL V+FR IKG K +K+GS K 
Sbjct: 6    VTKRAKYKTTIKDPGTPGTLRMTLEKILFVPHNPKSAGKLDVEFRFIKGQKHTKEGSSKP 65

Query: 368  ALLNLTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASEK 547
              LNLT    + G +IFEF N++D   CRDFVGKVL K             SG+V+    
Sbjct: 66   PWLNLTN--NQNGSFIFEFENYSDLQDCRDFVGKVLAK-------------SGEVSEKPT 110

Query: 548  ATASIEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRTL 727
             T   EQLS  EME R+KLLREDSELQKLHK+ V   VLTE+EFWATRK LLD ++++  
Sbjct: 111  VTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREANKKT 170

Query: 728  KQRTGFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEKD 907
            KQR GFKSAM++D++PSTDG+TNKVTF+LTPEII QIF+EKPAVHRAFL +VP KM+E+D
Sbjct: 171  KQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERD 230

Query: 908  FWTKYCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVAD 1087
            FWTKY RAEYLH TKNSV             VFLK DDILA+E+R KIRRVDPT+DM AD
Sbjct: 231  FWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDAD 290

Query: 1088 FSDDYIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRAV 1267
              DDY HL  HGI RDG+KE  +SEN+  +RTL+ D+NRHA VVLEGRA+D+EL DTR+V
Sbjct: 291  EGDDYTHLPDHGIFRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSV 350

Query: 1268 AEALARSK-EASSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDF 1444
            AEALARSK E+S+   S  + + +R +R  RMTEIEDLQA ++LP A LCIKDPR+YFD 
Sbjct: 351  AEALARSKQESSTKGESYGDTSRERLDRVSRMTEIEDLQAPNNLPLAPLCIKDPRDYFDS 410

Query: 1445 QQVNALKALGG--TGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTG 1618
            QQVNAL+  G    G+  I  SL++++ Y  L + IS +K  G+ +P+V+ + A +V   
Sbjct: 411  QQVNALRTSGDELAGTEQIKCSLSSQEVYGSLRESISVIKAMGLKDPIVKPEVAHQVFDA 470

Query: 1619 LTQQISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNK 1798
            LTQ IS+T+YN+GKNPQESVLDR PK+ K+E++ HW SI ELLRHFW+SYPITT+YLY K
Sbjct: 471  LTQSISTTKYNIGKNPQESVLDRLPKKIKEELLHHWTSILELLRHFWASYPITTSYLYTK 530


>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum tuberosum]
          Length = 599

 Score =  607 bits (1566), Expect = e-171
 Identities = 318/575 (55%), Positives = 408/575 (70%), Gaps = 5/575 (0%)
 Frame = +2

Query: 203  AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKD-GSKQALLN 379
            AKYKT+VK PG+PGVLK+ ++ F F PNDP    KL V+F+ IKGHK SK+  SKQALLN
Sbjct: 10   AKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKECSSKQALLN 69

Query: 380  LTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASEKATAS 559
            LTQ   +GG Y+FEF++F DR+ CRDFV   +     +          GK T+ + A   
Sbjct: 70   LTQA--QGGNYLFEFDSFPDRDQCRDFVASAIAACGEI----------GKATSEKPAVPH 117

Query: 560  IEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRTLKQRT 739
             EQLS  EM  R+KLL+E+SELQKLH++LV G +L+E+EFWA RK LL+   ++  KQR 
Sbjct: 118  DEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSENKKPKQRV 177

Query: 740  GFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEKDFWTK 919
              K+ M + V+P +DGQTN+VTF+LTPE+IHQIF+EKPAV +A+L FVP KM+EK+FWTK
Sbjct: 178  ALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTK 236

Query: 920  YCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVADFSDD 1099
            Y RAEYLH TKN V             VFLK DD+L +EARRKIRRVDPT+DM AD  DD
Sbjct: 237  YSRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDD 296

Query: 1100 YIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRAVAEAL 1279
            Y+HL  HG+ +   KE ++ + +  KR+ +  +N+HA VVL GR +D+ELGDTR+VAEA 
Sbjct: 297  YMHLPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAF 356

Query: 1280 ARSKEA-SSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDFQQVN 1456
             R+ +A  + + SDENA  +R ++  R+ EIEDLQ     P A L IKDPR+YFD QQ N
Sbjct: 357  TRTYQAEQATEVSDENAYRERVKKVSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQAN 416

Query: 1457 ALKALGG--TGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTGLTQQ 1630
            A+KALG   TG R + +S++ E+A+  L   ISE+  QG+  P++  + ALKV  GL+Q 
Sbjct: 417  AIKALGDAETGIRQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQN 476

Query: 1631 ISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNKVLRL 1810
            ISST+Y LGKNP ESVLD+ P  TK+E++LHW SIQELL+HFWSSYPITT Y Y KV RL
Sbjct: 477  ISSTKYYLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRL 536

Query: 1811 KSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            K AM+ IY KL+ IK+ VQSD RHQ+SLL+QPMLQ
Sbjct: 537  KDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQ 571


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  601 bits (1550), Expect = e-169
 Identities = 315/575 (54%), Positives = 406/575 (70%), Gaps = 5/575 (0%)
 Frame = +2

Query: 203  AKYKTTVKEPGIPGVLKMMEDVFSFTPNDPRSAKKLKVDFRNIKGHKFSKD-GSKQALLN 379
            AKYKT+VK PG+PGVLK+ ++ F F PNDP    KL V+F+ IKGHK SK+  SKQALLN
Sbjct: 10   AKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKECSSKQALLN 69

Query: 380  LTQVPEKGGGYIFEFNNFADRNVCRDFVGKVLGKFQTLTTEQTDQPSSGKVTASEKATAS 559
            LTQ   +GG Y+FEF++F DR+ CRDFV   +     +          GK T+ + A   
Sbjct: 70   LTQA--QGGNYLFEFDSFPDRDQCRDFVASAIAACGEI----------GKATSEKPAVPH 117

Query: 560  IEQLSTKEMEHRMKLLREDSELQKLHKELVFGNVLTESEFWATRKALLDDDSDRTLKQRT 739
             EQLS  EM  R+KLL+E+SELQ LH+ELV   +L+E+EFWA RK LL+   ++  KQR 
Sbjct: 118  DEQLSATEMGRRIKLLQENSELQNLHRELVIAGILSETEFWAARKKLLEQSENKKPKQRV 177

Query: 740  GFKSAMLADVRPSTDGQTNKVTFSLTPEIIHQIFSEKPAVHRAFLNFVPVKMTEKDFWTK 919
              K+ M + V+P +DGQTN+VTF+LTPE+IHQIF+EKPAV +A+L FVP KM+EK+FWTK
Sbjct: 178  ALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTK 236

Query: 920  YCRAEYLHRTKNSVXXXXXXXXXXXXXVFLKHDDILANEARRKIRRVDPTVDMVADFSDD 1099
            Y RAEYLH TKN V             VFLK DD+L +EARRKIRRVDPT+DM AD  DD
Sbjct: 237  YSRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDD 296

Query: 1100 YIHLSVHGILRDGNKETIDSENDFAKRTLAHDVNRHATVVLEGRALDIELGDTRAVAEAL 1279
            Y+HL  HG+ +   KE ++ + +  KR+ +  +N+HA VVL+GR +D+ELGDTR+VAEA 
Sbjct: 297  YMHLPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAF 356

Query: 1280 ARSKEA-SSVDTSDENANLDRQERAVRMTEIEDLQASHSLPYASLCIKDPREYFDFQQVN 1456
             R+ +A  + + SDENA  +R ++  R+ EIEDLQ     P A L IKDPR+YFD QQ N
Sbjct: 357  TRTNQAEQATEVSDENAYRERVKKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQAN 416

Query: 1457 ALKALGG--TGSRTIDYSLNTEDAYYYLLQQISEVKLQGVHNPVVQSDTALKVLTGLTQQ 1630
            A+KALG   TG R + + ++ E+A+  L   ISE+  QG+  P++  + ALKV   L+Q 
Sbjct: 417  AIKALGDAETGIRQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQN 476

Query: 1631 ISSTRYNLGKNPQESVLDRFPKRTKDEIMLHWMSIQELLRHFWSSYPITTAYLYNKVLRL 1810
            ISST+Y+LGKNP ESVLD+ P  TK+E++LHW SIQELL+HFWSSYPITT Y Y KV RL
Sbjct: 477  ISSTKYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRL 536

Query: 1811 KSAMADIYQKLKAIKD-VQSDFRHQISLLIQPMLQ 1912
            K AM+ IY KL+ IK+ VQSD RHQ+SLL+QPMLQ
Sbjct: 537  KDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQ 571