BLASTX nr result
ID: Zingiber23_contig00032256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00032256
(614 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-li... 71 3e-10
gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus pe... 70 5e-10
ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group] g... 70 5e-10
gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| T... 69 1e-09
ref|NP_001136723.1| hypothetical protein [Zea mays] gi|194696768... 69 1e-09
gb|EMT05286.1| hypothetical protein F775_04859 [Aegilops tauschii] 69 1e-09
gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu] 69 1e-09
ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-li... 69 1e-09
ref|XP_006645919.1| PREDICTED: exosome complex component rrp4-li... 68 2e-09
tpg|DAA35552.1| TPA: hypothetical protein ZEAMMB73_927289 [Zea m... 68 2e-09
ref|NP_001183320.1| uncharacterized protein LOC100501721 [Zea ma... 68 2e-09
ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [S... 67 3e-09
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li... 67 4e-09
gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus... 66 7e-09
ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-li... 66 7e-09
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li... 66 7e-09
emb|CBI32318.3| unnamed protein product [Vitis vinifera] 66 7e-09
gb|EXB39314.1| hypothetical protein L484_025009 [Morus notabilis] 66 9e-09
gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao] 66 9e-09
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4 [G... 65 1e-08
>ref|XP_004976250.1| PREDICTED: exosome complex component rrp4-like [Setaria italica]
Length = 319
Score = 70.9 bits (172), Expect = 3e-10
Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTITVV--ADTIPFNHEDSILKGHGTSD 609
+R+L LSLNQTQRVRL++AL LQ ++ A++ V ADTIP N ED+ILKGHGTSD
Sbjct: 1 MRDLHLSLNQTQRVRLEAALHELQSLTPAAASAAAVTVADTIPVNQEDNILKGHGTSD 58
>gb|EMJ01600.1| hypothetical protein PRUPE_ppa008572mg [Prunus persica]
Length = 326
Score = 70.1 bits (170), Expect = 5e-10
Identities = 35/58 (60%), Positives = 47/58 (81%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSD 609
+REL+LSLNQTQ+VRLQ AL+ L+ +SS A++ VAD+IP N+ED +LKGHGTS+
Sbjct: 1 MRELQLSLNQTQKVRLQRALEKLESLSSKANSNASVTVADSIPVNYEDGLLKGHGTSE 58
>ref|NP_001053332.1| Os04g0520000 [Oryza sativa Japonica Group]
gi|21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza
sativa Japonica Group] gi|113564903|dbj|BAF15246.1|
Os04g0520000 [Oryza sativa Japonica Group]
gi|116310818|emb|CAH67607.1| OSIGBa0145G11.6 [Oryza
sativa Indica Group] gi|215736890|dbj|BAG95819.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|218195230|gb|EEC77657.1| hypothetical protein
OsI_16671 [Oryza sativa Indica Group]
Length = 315
Score = 70.1 bits (170), Expect = 5e-10
Identities = 36/56 (64%), Positives = 45/56 (80%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTITVVADTIPFNHEDSILKGHGTSD 609
+R+L+LSLNQTQRVRL++AL LQ ++ A+ VADTIP N ED+ILKGHGTSD
Sbjct: 1 MRDLQLSLNQTQRVRLEAALHELQTVAPAAAV--TVADTIPVNDEDNILKGHGTSD 54
>gb|ACF86207.1| unknown [Zea mays] gi|414584980|tpg|DAA35551.1| TPA: hypothetical
protein ZEAMMB73_729707 [Zea mays]
Length = 319
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/58 (58%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMS--SLASTITVVADTIPFNHEDSILKGHGTSD 609
+++ LSLNQTQRVRL++ALQ LQ ++ ++++ VADTIP N ED+ILKGHGTSD
Sbjct: 1 MKDRHLSLNQTQRVRLEAALQELQSVAPAAVSAAAVTVADTIPVNQEDNILKGHGTSD 58
>ref|NP_001136723.1| hypothetical protein [Zea mays] gi|194696768|gb|ACF82468.1| unknown
[Zea mays] gi|414584979|tpg|DAA35550.1| TPA:
hypothetical protein ZEAMMB73_729707 [Zea mays]
Length = 209
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/58 (58%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMS--SLASTITVVADTIPFNHEDSILKGHGTSD 609
+++ LSLNQTQRVRL++ALQ LQ ++ ++++ VADTIP N ED+ILKGHGTSD
Sbjct: 1 MKDRHLSLNQTQRVRLEAALQELQSVAPAAVSAAAVTVADTIPVNQEDNILKGHGTSD 58
>gb|EMT05286.1| hypothetical protein F775_04859 [Aegilops tauschii]
Length = 316
Score = 68.6 bits (166), Expect = 1e-09
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTITVV--ADTIPFNHEDSILKGHGTSD 609
+R+L L LNQTQRVRL++AL LQ ++ A++ V AD IP NHED+ILKGHGT+D
Sbjct: 1 MRDLHLPLNQTQRVRLEAALHELQTLAPAAASAAAVTVADNIPVNHEDNILKGHGTTD 58
>gb|EMS47415.1| hypothetical protein TRIUR3_28456 [Triticum urartu]
Length = 326
Score = 68.6 bits (166), Expect = 1e-09
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTITVV--ADTIPFNHEDSILKGHGTSD 609
+R+L L LNQTQRVRL++AL LQ ++ A++ V AD IP NHED+ILKGHGT+D
Sbjct: 1 MRDLHLPLNQTQRVRLEAALHELQTLAPAAASAAAVTVADNIPVNHEDNILKGHGTTD 58
>ref|XP_004290688.1| PREDICTED: exosome complex component rrp4-like [Fragaria vesca
subsp. vesca]
Length = 328
Score = 68.6 bits (166), Expect = 1e-09
Identities = 33/59 (55%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSL--ASTITVVADTIPFNHEDSILKGHGTSDL 612
+R L++SLNQTQ+VRLQ AL+ L+ +SS ++ +VAD+IP NHED +LKGHGTS++
Sbjct: 1 MRGLQVSLNQTQKVRLQRALEKLESLSSKPNSNASVIVADSIPVNHEDGLLKGHGTSEV 59
>ref|XP_006645919.1| PREDICTED: exosome complex component rrp4-like [Oryza brachyantha]
Length = 319
Score = 67.8 bits (164), Expect = 2e-09
Identities = 35/58 (60%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMS--SLASTITVVADTIPFNHEDSILKGHGTSD 609
+R+L+LSLNQTQ+VRL +AL LQ ++ S ++ VADTIP N ED+ILKGHGTSD
Sbjct: 1 MRDLQLSLNQTQKVRLDAALHELQTIAPASTSAAAVSVADTIPVNDEDNILKGHGTSD 58
>tpg|DAA35552.1| TPA: hypothetical protein ZEAMMB73_927289 [Zea mays]
Length = 526
Score = 67.8 bits (164), Expect = 2e-09
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTITVVADTIPFNHEDSILKGHGTSD 609
+++ L+LNQTQRVRL++ALQ LQ ++ A+ VADTIP N ED+ILKGHGTSD
Sbjct: 1 MKDRHLALNQTQRVRLEAALQELQSVAPAAAV--TVADTIPVNQEDNILKGHGTSD 54
>ref|NP_001183320.1| uncharacterized protein LOC100501721 [Zea mays]
gi|238010760|gb|ACR36415.1| unknown [Zea mays]
Length = 526
Score = 67.8 bits (164), Expect = 2e-09
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTITVVADTIPFNHEDSILKGHGTSD 609
+++ L+LNQTQRVRL++ALQ LQ ++ A+ VADTIP N ED+ILKGHGTSD
Sbjct: 1 MKDRHLALNQTQRVRLEAALQELQSVAPAAAV--TVADTIPVNQEDNILKGHGTSD 54
>ref|XP_002447269.1| hypothetical protein SORBIDRAFT_06g031660 [Sorghum bicolor]
gi|241938452|gb|EES11597.1| hypothetical protein
SORBIDRAFT_06g031660 [Sorghum bicolor]
Length = 319
Score = 67.4 bits (163), Expect = 3e-09
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTITVV--ADTIPFNHEDSILKGHGTSD 609
+++ LSLNQTQRVRL++AL LQ ++ A++ V ADTIP N ED+ILKGHGTSD
Sbjct: 1 MKDRHLSLNQTQRVRLEAALHELQSLAPAAASAAAVTVADTIPVNQEDNILKGHGTSD 58
>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
distachyon]
Length = 319
Score = 67.0 bits (162), Expect = 4e-09
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLASTIT--VVADTIPFNHEDSILKGHGTSD 609
+R+L L LNQTQRVRL++AL LQ ++ A++ VAD IP N ED+ILKGHGTSD
Sbjct: 1 MRDLHLPLNQTQRVRLEAALHELQSLAPAAASAASVTVADNIPVNQEDNILKGHGTSD 58
>gb|ESW34379.1| hypothetical protein PHAVU_001G147600g [Phaseolus vulgaris]
Length = 325
Score = 66.2 bits (160), Expect = 7e-09
Identities = 30/59 (50%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSDL 612
+R ++L L+QTQ+VRLQ L+ L+ +SS ++ ++AD+IP NHED +LKGHGT+DL
Sbjct: 1 MRRIQLPLSQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADL 59
>ref|XP_004495115.1| PREDICTED: exosome complex component rrp4-like [Cicer arietinum]
Length = 327
Score = 66.2 bits (160), Expect = 7e-09
Identities = 31/59 (52%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSDL 612
+R ++L L+QTQ+VRLQ AL+ L+ +SS ++ +AD+IP NHED +LKGHGT+DL
Sbjct: 1 MRGIQLQLSQTQKVRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTTDL 59
>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
Length = 330
Score = 66.2 bits (160), Expect = 7e-09
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSDL 612
+R +LSLNQTQ++RLQ AL+ L+ +SS +++ VADTIP N+ED +LKGHGT DL
Sbjct: 1 MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDL 59
>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 66.2 bits (160), Expect = 7e-09
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSDL 612
+R +LSLNQTQ++RLQ AL+ L+ +SS +++ VADTIP N+ED +LKGHGT DL
Sbjct: 1 MRGFQLSLNQTQKLRLQRALEQLESLSSKSNSNASVAVADTIPVNYEDGVLKGHGTLDL 59
>gb|EXB39314.1| hypothetical protein L484_025009 [Morus notabilis]
Length = 331
Score = 65.9 bits (159), Expect = 9e-09
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSDL 612
+R +LSLNQTQ+VRLQ AL+ L+ +SS ++ VAD+IP N+ED +LKGHGTS+L
Sbjct: 5 MRGTQLSLNQTQKVRLQRALEQLESLSSKVNSNASVTVADSIPVNYEDGVLKGHGTSEL 63
>gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]
Length = 319
Score = 65.9 bits (159), Expect = 9e-09
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSDL 612
+R L+L LNQTQR+RLQ AL+ L +SS A++ VADTIP N++D+ LKGHGT++L
Sbjct: 1 MRGLQLPLNQTQRIRLQRALEKLHSLSSKANSDASVTVADTIPVNYDDAFLKGHGTTEL 59
>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4 [Glycine max]
Length = 327
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/59 (50%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = +1
Query: 442 LRELRLSLNQTQRVRLQSALQSLQEMSSLAST--ITVVADTIPFNHEDSILKGHGTSDL 612
+RE++L L+QTQ+VRLQ AL+ L+ +S+ ++ ++AD+I NHED +LKGHGT+DL
Sbjct: 1 MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADL 59