BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00032037
         (997 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   278   2e-72
emb|CBI17533.3| unnamed protein product [Vitis vinifera]              278   2e-72
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   265   2e-68
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   263   6e-68
gb|EXC35516.1| ATP-dependent DNA helicase DDM1 [Morus notabilis]      263   1e-67
ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   261   2e-67
ref|XP_006590686.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   260   7e-67
ref|XP_002325643.2| DECREASED DNA METHYLATION 1 family protein [...   259   9e-67
ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   257   4e-66
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...   257   4e-66
gb|EEC76092.1| hypothetical protein OsI_13335 [Oryza sativa Indi...   256   1e-65
dbj|BAF34943.1| chromatin remodeling factor DDM1b [Oryza sativa ...   256   1e-65
gb|AAX95695.1| SNF2 family N-terminal domain, putative [Oryza sa...   256   1e-65
ref|XP_006573583.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   253   1e-64
gb|EOX91123.1| Chromatin remodeling 1 isoform 4 [Theobroma cacao]     251   3e-64
gb|EOX91122.1| Chromatin remodeling 1 isoform 3, partial [Theobr...   251   3e-64
gb|EOX91121.1| Chromatin remodeling 1 isoform 2 [Theobroma cacao]     251   3e-64
gb|EOX91120.1| Chromatin remodeling 1 isoform 1 [Theobroma cacao]     251   3e-64
gb|EMJ05841.1| hypothetical protein PRUPE_ppa001803mg [Prunus pe...   250   5e-64
ref|XP_003560489.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   250   5e-64

>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  278 bits (712), Expect = 2e-72
 Identities = 160/251 (63%), Positives = 187/251 (74%), Gaps = 3/251 (1%)
 Frame = +1

Query: 253 NRIKEE-TADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGDTFL 429
           N +K++ +ADSP SVLE+EGIC  K +           + +EDD   PL+  AKNGD+ L
Sbjct: 5   NEVKDDASADSPTSVLEDEGICEEKIK-----------VKMEDDILHPLD--AKNGDSSL 51

Query: 430 ITETMEKEENLL-RARAKEENLEQEVAENAWG-SELRFSKLDELLTQTQLYSQFLLEKMD 603
           I+ TM KEE +L + R KEE+ EQ V + A   ++ +F+KLDELLTQTQLYS+FLLEKMD
Sbjct: 52  ISGTMAKEEEMLMKERVKEEDAEQVVTQEAPHLNDSQFTKLDELLTQTQLYSEFLLEKMD 111

Query: 604 AITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPEDTS 783
           +ITFN  E       E K  K  R  KRKA   YNNRKAK AV AMLTRS+E  TPED +
Sbjct: 112 SITFNRVEEKESEIVEVK--KRGRGSKRKA--EYNNRKAKRAVAAMLTRSKEGATPEDVN 167

Query: 784 LTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIG 963
           LT+E+RAEKEQA LVPL+TGGKLK YQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIG
Sbjct: 168 LTEEERAEKEQAGLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIG 227

Query: 964 FLSHLKGKGLD 996
           FL+HLKGKGLD
Sbjct: 228 FLAHLKGKGLD 238


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  278 bits (712), Expect = 2e-72
 Identities = 160/251 (63%), Positives = 187/251 (74%), Gaps = 3/251 (1%)
 Frame = +1

Query: 253 NRIKEE-TADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGDTFL 429
           N +K++ +ADSP SVLE+EGIC  K +           + +EDD   PL+  AKNGD+ L
Sbjct: 5   NEVKDDASADSPTSVLEDEGICEEKIK-----------VKMEDDILHPLD--AKNGDSSL 51

Query: 430 ITETMEKEENLL-RARAKEENLEQEVAENAWG-SELRFSKLDELLTQTQLYSQFLLEKMD 603
           I+ TM KEE +L + R KEE+ EQ V + A   ++ +F+KLDELLTQTQLYS+FLLEKMD
Sbjct: 52  ISGTMAKEEEMLMKERVKEEDAEQVVTQEAPHLNDSQFTKLDELLTQTQLYSEFLLEKMD 111

Query: 604 AITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPEDTS 783
           +ITFN  E       E K  K  R  KRKA   YNNRKAK AV AMLTRS+E  TPED +
Sbjct: 112 SITFNRVEEKESEIVEVK--KRGRGSKRKA--EYNNRKAKRAVAAMLTRSKEGATPEDVN 167

Query: 784 LTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIG 963
           LT+E+RAEKEQA LVPL+TGGKLK YQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIG
Sbjct: 168 LTEEERAEKEQAGLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIG 227

Query: 964 FLSHLKGKGLD 996
           FL+HLKGKGLD
Sbjct: 228 FLAHLKGKGLD 238


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  265 bits (678), Expect = 2e-68
 Identities = 153/273 (56%), Positives = 186/273 (68%), Gaps = 3/273 (1%)
 Frame = +1

Query: 187 GFSELPLDL*YLRKSEMEGEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQI 366
           GFS L     YL         E    + +A+SP SVLE+E +CN + E+ + EE      
Sbjct: 60  GFSSL-----YLLSGLKMAVEEKPRADNSAESPTSVLEDEDLCNGEKEIKLEEE------ 108

Query: 367 NVEDDTCLPLELEAKNGDTFLITETM-EKEENLLRARAKEENLE--QEVAENAWGSELRF 537
                    + LEAKNGD+ LI++ M E+E+ LL AR KEE  +  ++  E+   S+ +F
Sbjct: 109 ---------IILEAKNGDSSLISKEMAEEEQKLLEARVKEEEAKRLEDSTESEKLSDNQF 159

Query: 538 SKLDELLTQTQLYSQFLLEKMDAITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRK 717
           +KLDELLTQTQLYS+FLLEKMD ITFN  E   +   ++ G    R  KRKA   YNN+K
Sbjct: 160 TKLDELLTQTQLYSEFLLEKMDDITFNEMEEDKKSVEKSSG----RGSKRKAAARYNNKK 215

Query: 718 AKTAVRAMLTRSQEAVTPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLW 897
           AK AV AMLTRS+E    ED +LT E+R EKEQ+ELVPL+TGGKLK YQ+KGVKWLISLW
Sbjct: 216 AKRAVAAMLTRSKEGEQDEDVNLTGEERIEKEQSELVPLLTGGKLKSYQLKGVKWLISLW 275

Query: 898 QNGLNGILADQMGLGKTIQTIGFLSHLKGKGLD 996
           QNGLNGILADQMGLGKTIQTIGFL+HLKGKGLD
Sbjct: 276 QNGLNGILADQMGLGKTIQTIGFLAHLKGKGLD 308


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score =  263 bits (673), Expect = 6e-68
 Identities = 152/273 (55%), Positives = 186/273 (68%), Gaps = 3/273 (1%)
 Frame = +1

Query: 187 GFSELPLDL*YLRKSEMEGEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQI 366
           GFS L     YL         E    + +A+SP SVLE+E +CN + E+ + EE      
Sbjct: 54  GFSSL-----YLLSGLKMAVEEKPRADNSAESPTSVLEDEDLCNGEKEIKLEEE------ 102

Query: 367 NVEDDTCLPLELEAKNGDTFLITETM-EKEENLLRARAKEENLE--QEVAENAWGSELRF 537
                    + LEAKNGD+ LI++ M E+E+ LL AR KEE  +  ++  E+   S+ +F
Sbjct: 103 ---------IILEAKNGDSSLISKEMAEEEQKLLEARVKEEEAKRLEDSTESEKLSDNQF 153

Query: 538 SKLDELLTQTQLYSQFLLEKMDAITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRK 717
           +KLDELLTQTQLYS+FLLEKMD ITF+  E   +   ++ G    R  KRKA   YNN+K
Sbjct: 154 TKLDELLTQTQLYSEFLLEKMDDITFSEMEEDKKSVEKSSG----RGSKRKAAARYNNKK 209

Query: 718 AKTAVRAMLTRSQEAVTPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLW 897
           AK AV AMLTRS+E    ED +LT E+R EKEQ+ELVPL+TGGKLK YQ+KGVKWLISLW
Sbjct: 210 AKRAVAAMLTRSKEGEQDEDVNLTGEERIEKEQSELVPLLTGGKLKSYQLKGVKWLISLW 269

Query: 898 QNGLNGILADQMGLGKTIQTIGFLSHLKGKGLD 996
           QNGLNGILADQMGLGKTIQTIGFL+HLKGKGLD
Sbjct: 270 QNGLNGILADQMGLGKTIQTIGFLAHLKGKGLD 302


>gb|EXC35516.1| ATP-dependent DNA helicase DDM1 [Morus notabilis]
          Length = 875

 Score =  263 bits (671), Expect = 1e-67
 Identities = 152/284 (53%), Positives = 194/284 (68%), Gaps = 8/284 (2%)
 Frame = +1

Query: 169 FRSPSPGFSELP----LDL*YLRKSEM-EGEMENRIKEETADSPKSVLEEEGICNVKSEL 333
           F++P   ++ +P     D    R  EM + EM+N +    A+SP SVLE+E ICN K E+
Sbjct: 90  FKNPKCAYNVVPNETCADSLCDRSFEMGDDEMKNEV---VAESPTSVLEDEDICNEKVEV 146

Query: 334 AVSEENETPQINVEDDTCLPLELEAKNGDTFLITETM-EKEENLLRARAKEEN--LEQEV 504
            + EE               + ++ KNGD+ LI+  M E EE LL AR KEE   L++E 
Sbjct: 147 KLEEE---------------ILVDGKNGDSLLISTAMVEAEEKLLEARLKEEEEELKKEP 191

Query: 505 AENAWGSELRFSKLDELLTQTQLYSQFLLEKMDAITFNNSENTPEVENEAKGTKGNRARK 684
            E+A  ++ +F+KLDELLT+TQ++S+FLLEKMD I  +  E   E   + KG  G R   
Sbjct: 192 DESANLNDTQFTKLDELLTKTQMFSEFLLEKMDDIMLDRVEQEAETTEKKKGLGGKR--- 248

Query: 685 RKATTHYNNRKAKTAVRAMLTRSQEAVTPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQ 864
           +KA T YN RKAK AV+AMLTRS+E+   EDT LT+E+R EKEQ ELVPL+TGGKLK YQ
Sbjct: 249 KKAATQYNTRKAKRAVQAMLTRSKESEEAEDTDLTEEERVEKEQRELVPLLTGGKLKSYQ 308

Query: 865 IKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGKGLD 996
           +KG+KWLISLWQNGLNGILADQMGLGKTIQT+GFL+HLKGKG+D
Sbjct: 309 LKGIKWLISLWQNGLNGILADQMGLGKTIQTVGFLAHLKGKGMD 352


>ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
           tuberosum] gi|565360381|ref|XP_006346948.1| PREDICTED:
           ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
           tuberosum]
          Length = 754

 Score =  261 bits (668), Expect = 2e-67
 Identities = 153/246 (62%), Positives = 183/246 (74%), Gaps = 5/246 (2%)
 Frame = +1

Query: 274 ADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGDTFLITETMEKE 453
           ADSP SVL EE  C  K +LAV  E+E             + L+AKNGD  L++E M+KE
Sbjct: 16  ADSPVSVLAEEDTC--KEKLAVKLEDE-------------VFLDAKNGDVSLLSELMKKE 60

Query: 454 E-NLLRARAKEENL-EQEVAENAWGSELRFSKLDELLTQTQLYSQFLLEKMDAITFNNSE 627
           E NL++AR KEE + + + A N   ++L+FSKLDELLTQTQLYS+FLLEKMD IT     
Sbjct: 61  EENLIKARVKEEEVNDPKEAPNL--NDLQFSKLDELLTQTQLYSEFLLEKMDNITVAG-- 116

Query: 628 NTPEVENEAKGT---KGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPEDTSLTDEQ 798
               VE+E KG+   K  R RKRKA T YNN+KAK AV AML+RS+E  + ED++LT+E+
Sbjct: 117 ----VEDEEKGSEDKKRGRGRKRKAETSYNNKKAKRAVAAMLSRSKEGGSVEDSTLTEEE 172

Query: 799 RAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL 978
           RA+KEQAELVPL+TGGKLK YQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTI FL+HL
Sbjct: 173 RADKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTISFLAHL 232

Query: 979 KGKGLD 996
           KG GLD
Sbjct: 233 KGNGLD 238


>ref|XP_006590686.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 763

 Score =  260 bits (664), Expect = 7e-67
 Identities = 144/257 (56%), Positives = 180/257 (70%), Gaps = 3/257 (1%)
 Frame = +1

Query: 235 MEGEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKN 414
           ME + + +I + TA+SP SVLE+E +C  K E+ + EE               +  + K+
Sbjct: 1   MEAKNKVKIDDSTAESPTSVLEDEAVCAPKEEVKLEEE---------------VTADIKD 45

Query: 415 GDTFLITETM-EKEENLLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLL 591
             T LI++TM E+EENL+ AR KEE ++ E   +   ++ +F+KLDELLTQT+LYS+FLL
Sbjct: 46  DGTSLISKTMVEEEENLIEARMKEEEVQCEEVPDL--NDTQFNKLDELLTQTKLYSEFLL 103

Query: 592 EKMDAITF--NNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAV 765
           EKMD IT      EN  E E+     K     KRKA + YN RKAK AV AMLTRS+E+ 
Sbjct: 104 EKMDDITLAVGEQENREEQESNPSAKKKGCGSKRKAASQYNTRKAKKAVTAMLTRSEESE 163

Query: 766 TPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGK 945
             EDT++T+E+R EKEQ EL+PL+TGGKLK YQ+KGVKWLISLWQNGLNGILADQMGLGK
Sbjct: 164 KTEDTNMTEEERVEKEQKELMPLLTGGKLKTYQLKGVKWLISLWQNGLNGILADQMGLGK 223

Query: 946 TIQTIGFLSHLKGKGLD 996
           TIQTIGFLSHLK KGLD
Sbjct: 224 TIQTIGFLSHLKAKGLD 240


>ref|XP_002325643.2| DECREASED DNA METHYLATION 1 family protein [Populus trichocarpa]
           gi|550317598|gb|EEF00025.2| DECREASED DNA METHYLATION 1
           family protein [Populus trichocarpa]
          Length = 749

 Score =  259 bits (663), Expect = 9e-67
 Identities = 149/253 (58%), Positives = 180/253 (71%), Gaps = 3/253 (1%)
 Frame = +1

Query: 247 MENRIKEE-TADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGDT 423
           M + +K E +ADSP SVLE+E  CN+K E  V                    +EAKNGD 
Sbjct: 1   MGSEVKSEASADSPTSVLEDEEQCNLKVEEEVF-------------------VEAKNGDA 41

Query: 424 FLITETM-EKEENLLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLEKM 600
            LI+ +M E+EE LL++R KEE +E+  AE A   E +F++LD+LLTQTQLYS+FLLEK+
Sbjct: 42  SLISISMAEEEEKLLKSRMKEEEIEKAAAEEAQLDESQFNRLDQLLTQTQLYSEFLLEKI 101

Query: 601 DAITFNNSENTPE-VENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPED 777
           D IT N +E   E VE + +G    R  KRKA   YN+RKAK AV AMLTRS+E    ED
Sbjct: 102 DQITANGAEQESEPVEQKKRG----RGSKRKAAAQYNSRKAKRAVTAMLTRSKEVDKVED 157

Query: 778 TSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQT 957
            +LT+E+RAEKEQ ELVPL+TGG+LK YQIKGVKWLISLW NGLNGILADQMGLGKTIQT
Sbjct: 158 ANLTEEERAEKEQRELVPLLTGGRLKSYQIKGVKWLISLWTNGLNGILADQMGLGKTIQT 217

Query: 958 IGFLSHLKGKGLD 996
           IGFL+HLKG GL+
Sbjct: 218 IGFLAHLKGNGLN 230


>ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
           tuberosum] gi|565347157|ref|XP_006340600.1| PREDICTED:
           ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
           tuberosum]
          Length = 760

 Score =  257 bits (657), Expect = 4e-66
 Identities = 151/249 (60%), Positives = 175/249 (70%), Gaps = 3/249 (1%)
 Frame = +1

Query: 259 IKEET-ADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGDTFLIT 435
           +K+ T ADSP SVLE+E  C  K +LAV  E E             + L+ +NGD   I 
Sbjct: 7   VKDRTVADSPVSVLEDEDTC--KEDLAVKLEEE-------------VSLDPENGDATHIP 51

Query: 436 ETMEKEENLL-RARAKEENLE-QEVAENAWGSELRFSKLDELLTQTQLYSQFLLEKMDAI 609
           E M KEE +L RARAKEE  +   + E    ++ +F+KLDELLTQTQLYS+FLLEKMD I
Sbjct: 52  ENMAKEEEILIRARAKEEEEQLNNLKEAPILNDTQFTKLDELLTQTQLYSEFLLEKMDNI 111

Query: 610 TFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPEDTSLT 789
           T  N +   + E   K  K  R  KRKATT YNN KAK AV AMLTRS+E V  ED +LT
Sbjct: 112 TTTNVKE--DEEKSVKENKKGRGAKRKATTSYNNNKAKRAVAAMLTRSKEDVPIEDATLT 169

Query: 790 DEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL 969
           +E+R EKEQAELVPL+TGGKLK YQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTI FL
Sbjct: 170 EEERFEKEQAELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFL 229

Query: 970 SHLKGKGLD 996
           +HLKG GLD
Sbjct: 230 AHLKGNGLD 238


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
           communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
           remodeling complex ATPase ISW1, putative [Ricinus
           communis]
          Length = 788

 Score =  257 bits (657), Expect = 4e-66
 Identities = 151/268 (56%), Positives = 182/268 (67%), Gaps = 2/268 (0%)
 Frame = +1

Query: 199 LPLDL*YLRKSEMEGEMENRIKEE-TADSPKSVLEEEGICNVKSELAVSEENETPQINVE 375
           + LD     + E+E   E+ +K + +ADSP SVLE+E  C  K+            I++E
Sbjct: 20  ISLDELQTHQKELEMAAESEMKNDASADSPTSVLEDEEKCKEKTV-----------IDLE 68

Query: 376 DDTCLPLELEAKNGDTFLITETM-EKEENLLRARAKEENLEQEVAENAWGSELRFSKLDE 552
            D    + L+AKNGD  L++  M E+EE LL AR KEE  + +  E A  ++ +F+KLDE
Sbjct: 69  KD----ILLDAKNGDISLLSRAMAEEEEKLLEARVKEEAEQGKEPEEAHLNDAQFTKLDE 124

Query: 553 LLTQTQLYSQFLLEKMDAITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAV 732
           LLTQTQLYS+FLLEKMD IT N  E+    E   K  K  R  KRKA   YN+RKA  AV
Sbjct: 125 LLTQTQLYSEFLLEKMDEITRNGVEHETGTETAQK--KRGRGSKRKAAAEYNSRKATRAV 182

Query: 733 RAMLTRSQEAVTPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLN 912
            AMLTRS+E    ED +LT+E+R EKEQ ELVPL+TGGKLK YQIKGVKWLISLWQNGLN
Sbjct: 183 AAMLTRSEEVEKTEDANLTEEERLEKEQRELVPLLTGGKLKSYQIKGVKWLISLWQNGLN 242

Query: 913 GILADQMGLGKTIQTIGFLSHLKGKGLD 996
           GILADQMGLGKTIQTI FL+HLKG GLD
Sbjct: 243 GILADQMGLGKTIQTISFLAHLKGNGLD 270


>gb|EEC76092.1| hypothetical protein OsI_13335 [Oryza sativa Indica Group]
          Length = 850

 Score =  256 bits (653), Expect = 1e-65
 Identities = 139/217 (64%), Positives = 165/217 (76%), Gaps = 8/217 (3%)
 Frame = +1

Query: 370 VEDDTCLPLELEAKNGDTFLITETMEKEENLLR-ARAKEENLEQ-----EVAENAWGSEL 531
           V+  + LP++LEAKNGD  LIT+ M++EE+ L  AR K +  E+     E A  A+    
Sbjct: 118 VDATSSLPIDLEAKNGDASLITDAMKEEEDKLHEARVKADEEEEARKRAEAARLAFDPNA 177

Query: 532 RFSKLDELLTQTQLYSQFLLEKMDAITFNNSENTPEVENEAKGTKGNRARKRKATT--HY 705
           RF+KLDELLTQTQLYS+FLLEKM+ I      +TP+ E   +  K  R RKRKAT+   Y
Sbjct: 178 RFNKLDELLTQTQLYSEFLLEKMETIADVEGVDTPDEEEPVEEKKKGRGRKRKATSAPKY 237

Query: 706 NNRKAKTAVRAMLTRSQEAVTPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWL 885
           NN+KAK AV AMLTRS+E  +PED +LT+E+R EKEQA LVPL+TGGKLK YQIKGVKWL
Sbjct: 238 NNKKAKKAVAAMLTRSREDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWL 297

Query: 886 ISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGKGLD 996
           ISLWQNGLNGILADQMGLGKTIQTIGFL+HLKGKGLD
Sbjct: 298 ISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLD 334


>dbj|BAF34943.1| chromatin remodeling factor DDM1b [Oryza sativa Japonica Group]
           gi|116235011|dbj|BAF34945.1| chromatin remodeling factor
           DDM1b [Oryza sativa Japonica Group]
           gi|222625697|gb|EEE59829.1| hypothetical protein
           OsJ_12393 [Oryza sativa Japonica Group]
          Length = 849

 Score =  256 bits (653), Expect = 1e-65
 Identities = 139/217 (64%), Positives = 165/217 (76%), Gaps = 8/217 (3%)
 Frame = +1

Query: 370 VEDDTCLPLELEAKNGDTFLITETMEKEENLLR-ARAKEENLEQ-----EVAENAWGSEL 531
           V+  + LP++LEAKNGD  LIT+ M++EE+ L  AR K +  E+     E A  A+    
Sbjct: 117 VDATSSLPIDLEAKNGDASLITDAMKEEEDKLHEARVKADEEEEARKRAEAARLAFDPNA 176

Query: 532 RFSKLDELLTQTQLYSQFLLEKMDAITFNNSENTPEVENEAKGTKGNRARKRKATT--HY 705
           RF+KLDELLTQTQLYS+FLLEKM+ I      +TP+ E   +  K  R RKRKAT+   Y
Sbjct: 177 RFNKLDELLTQTQLYSEFLLEKMETIADVEGVDTPDEEEPVEEKKKGRGRKRKATSAPKY 236

Query: 706 NNRKAKTAVRAMLTRSQEAVTPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWL 885
           NN+KAK AV AMLTRS+E  +PED +LT+E+R EKEQA LVPL+TGGKLK YQIKGVKWL
Sbjct: 237 NNKKAKKAVAAMLTRSREDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWL 296

Query: 886 ISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGKGLD 996
           ISLWQNGLNGILADQMGLGKTIQTIGFL+HLKGKGLD
Sbjct: 297 ISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLD 333


>gb|AAX95695.1| SNF2 family N-terminal domain, putative [Oryza sativa Japonica
           Group] gi|108710803|gb|ABF98598.1| Swi2/Snf2-related
           protein DDM1, putative [Oryza sativa Japonica Group]
          Length = 811

 Score =  256 bits (653), Expect = 1e-65
 Identities = 139/217 (64%), Positives = 165/217 (76%), Gaps = 8/217 (3%)
 Frame = +1

Query: 370 VEDDTCLPLELEAKNGDTFLITETMEKEENLLR-ARAKEENLEQ-----EVAENAWGSEL 531
           V+  + LP++LEAKNGD  LIT+ M++EE+ L  AR K +  E+     E A  A+    
Sbjct: 114 VDATSSLPIDLEAKNGDASLITDAMKEEEDKLHEARVKADEEEEARKRAEAARLAFDPNA 173

Query: 532 RFSKLDELLTQTQLYSQFLLEKMDAITFNNSENTPEVENEAKGTKGNRARKRKATT--HY 705
           RF+KLDELLTQTQLYS+FLLEKM+ I      +TP+ E   +  K  R RKRKAT+   Y
Sbjct: 174 RFNKLDELLTQTQLYSEFLLEKMETIADVEGVDTPDEEEPVEEKKKGRGRKRKATSAPKY 233

Query: 706 NNRKAKTAVRAMLTRSQEAVTPEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWL 885
           NN+KAK AV AMLTRS+E  +PED +LT+E+R EKEQA LVPL+TGGKLK YQIKGVKWL
Sbjct: 234 NNKKAKKAVAAMLTRSREDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWL 293

Query: 886 ISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGKGLD 996
           ISLWQNGLNGILADQMGLGKTIQTIGFL+HLKGKGLD
Sbjct: 294 ISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLD 330


>ref|XP_006573583.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 762

 Score =  253 bits (645), Expect = 1e-64
 Identities = 142/256 (55%), Positives = 181/256 (70%), Gaps = 5/256 (1%)
 Frame = +1

Query: 244 EMENRIKEE--TADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNG 417
           E ++++K E   A+SP SVLE+E +C +K E+ + E                +  + K+ 
Sbjct: 2   EAKDKVKNEDSAAESPTSVLEDEDVCALKEEVKLEEM---------------VTADVKDD 46

Query: 418 DTFLITETM-EKEENLLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLE 594
            + LI++TM E+EE LL AR KEE ++ E A +   ++++F+KLDELLTQT+LYS+FLLE
Sbjct: 47  GSSLISKTMVEEEEKLLEARIKEEEVQYEEAVDL--NDIQFNKLDELLTQTRLYSEFLLE 104

Query: 595 KMDAITF--NNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVT 768
           KMD IT      EN  E E+     KG R  KRK  + YN RKAK AV AMLTRS+E+  
Sbjct: 105 KMDDITLAVGEQENREEQESNPSAKKG-RGSKRKVASQYNTRKAKKAVAAMLTRSKESEK 163

Query: 769 PEDTSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKT 948
            ED ++T+E+R EKEQ EL+PL+TGGKLK+YQ+KGVKWLISLWQNGLNGILADQMGLGKT
Sbjct: 164 TEDMNMTEEERVEKEQKELMPLLTGGKLKNYQLKGVKWLISLWQNGLNGILADQMGLGKT 223

Query: 949 IQTIGFLSHLKGKGLD 996
           IQTIGFLSHLK KGLD
Sbjct: 224 IQTIGFLSHLKAKGLD 239


>gb|EOX91123.1| Chromatin remodeling 1 isoform 4 [Theobroma cacao]
          Length = 642

 Score =  251 bits (641), Expect = 3e-64
 Identities = 142/253 (56%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
 Frame = +1

Query: 241 GEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGD 420
           G  + +  + +A+SP SVLE+E  C            E   I +E++T L    +AKNGD
Sbjct: 2   GPEKGKENDASAESPTSVLEDEEKC------------EEEIIKLEEETIL----DAKNGD 45

Query: 421 TFLITETMEKEEN-LLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLEK 597
           + L++ +M KEE  L+ AR KEE  ++E AE    ++ +F++LDELLTQTQ+YS+FLLEK
Sbjct: 46  SSLLSGSMVKEEEKLMEARLKEETKQEEPAEAVHLNDTQFTRLDELLTQTQMYSEFLLEK 105

Query: 598 MDAITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPED 777
           M+ ITF  +E  PE E   K  K  R  KR+A   YNNRKAK AV AMLTRS+E    ED
Sbjct: 106 MEDITFIGAE--PEAEAPQK--KRGRGSKRRAANQYNNRKAKRAVAAMLTRSKENEKTED 161

Query: 778 TSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQT 957
            +LT+E++ EKEQ ELVPL+TGGKLK YQ+KGVKWLISLWQNGLNGILADQMGLGKTIQT
Sbjct: 162 VNLTEEEKIEKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQT 221

Query: 958 IGFLSHLKGKGLD 996
           I FL+HLKG G+D
Sbjct: 222 IAFLAHLKGNGMD 234


>gb|EOX91122.1| Chromatin remodeling 1 isoform 3, partial [Theobroma cacao]
          Length = 667

 Score =  251 bits (641), Expect = 3e-64
 Identities = 142/253 (56%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
 Frame = +1

Query: 241 GEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGD 420
           G  + +  + +A+SP SVLE+E  C            E   I +E++T L    +AKNGD
Sbjct: 14  GPEKGKENDASAESPTSVLEDEEKC------------EEEIIKLEEETIL----DAKNGD 57

Query: 421 TFLITETMEKEEN-LLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLEK 597
           + L++ +M KEE  L+ AR KEE  ++E AE    ++ +F++LDELLTQTQ+YS+FLLEK
Sbjct: 58  SSLLSGSMVKEEEKLMEARLKEETKQEEPAEAVHLNDTQFTRLDELLTQTQMYSEFLLEK 117

Query: 598 MDAITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPED 777
           M+ ITF  +E  PE E   K  K  R  KR+A   YNNRKAK AV AMLTRS+E    ED
Sbjct: 118 MEDITFIGAE--PEAEAPQK--KRGRGSKRRAANQYNNRKAKRAVAAMLTRSKENEKTED 173

Query: 778 TSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQT 957
            +LT+E++ EKEQ ELVPL+TGGKLK YQ+KGVKWLISLWQNGLNGILADQMGLGKTIQT
Sbjct: 174 VNLTEEEKIEKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQT 233

Query: 958 IGFLSHLKGKGLD 996
           I FL+HLKG G+D
Sbjct: 234 IAFLAHLKGNGMD 246


>gb|EOX91121.1| Chromatin remodeling 1 isoform 2 [Theobroma cacao]
          Length = 686

 Score =  251 bits (641), Expect = 3e-64
 Identities = 142/253 (56%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
 Frame = +1

Query: 241 GEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGD 420
           G  + +  + +A+SP SVLE+E  C            E   I +E++T L    +AKNGD
Sbjct: 2   GPEKGKENDASAESPTSVLEDEEKC------------EEEIIKLEEETIL----DAKNGD 45

Query: 421 TFLITETMEKEEN-LLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLEK 597
           + L++ +M KEE  L+ AR KEE  ++E AE    ++ +F++LDELLTQTQ+YS+FLLEK
Sbjct: 46  SSLLSGSMVKEEEKLMEARLKEETKQEEPAEAVHLNDTQFTRLDELLTQTQMYSEFLLEK 105

Query: 598 MDAITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPED 777
           M+ ITF  +E  PE E   K  K  R  KR+A   YNNRKAK AV AMLTRS+E    ED
Sbjct: 106 MEDITFIGAE--PEAEAPQK--KRGRGSKRRAANQYNNRKAKRAVAAMLTRSKENEKTED 161

Query: 778 TSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQT 957
            +LT+E++ EKEQ ELVPL+TGGKLK YQ+KGVKWLISLWQNGLNGILADQMGLGKTIQT
Sbjct: 162 VNLTEEEKIEKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQT 221

Query: 958 IGFLSHLKGKGLD 996
           I FL+HLKG G+D
Sbjct: 222 IAFLAHLKGNGMD 234


>gb|EOX91120.1| Chromatin remodeling 1 isoform 1 [Theobroma cacao]
          Length = 754

 Score =  251 bits (641), Expect = 3e-64
 Identities = 142/253 (56%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
 Frame = +1

Query: 241 GEMENRIKEETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGD 420
           G  + +  + +A+SP SVLE+E  C            E   I +E++T L    +AKNGD
Sbjct: 2   GPEKGKENDASAESPTSVLEDEEKC------------EEEIIKLEEETIL----DAKNGD 45

Query: 421 TFLITETMEKEEN-LLRARAKEENLEQEVAENAWGSELRFSKLDELLTQTQLYSQFLLEK 597
           + L++ +M KEE  L+ AR KEE  ++E AE    ++ +F++LDELLTQTQ+YS+FLLEK
Sbjct: 46  SSLLSGSMVKEEEKLMEARLKEETKQEEPAEAVHLNDTQFTRLDELLTQTQMYSEFLLEK 105

Query: 598 MDAITFNNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPED 777
           M+ ITF  +E  PE E   K  K  R  KR+A   YNNRKAK AV AMLTRS+E    ED
Sbjct: 106 MEDITFIGAE--PEAEAPQK--KRGRGSKRRAANQYNNRKAKRAVAAMLTRSKENEKTED 161

Query: 778 TSLTDEQRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQT 957
            +LT+E++ EKEQ ELVPL+TGGKLK YQ+KGVKWLISLWQNGLNGILADQMGLGKTIQT
Sbjct: 162 VNLTEEEKIEKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQT 221

Query: 958 IGFLSHLKGKGLD 996
           I FL+HLKG G+D
Sbjct: 222 IAFLAHLKGNGMD 234


>gb|EMJ05841.1| hypothetical protein PRUPE_ppa001803mg [Prunus persica]
          Length = 763

 Score =  250 bits (639), Expect = 5e-64
 Identities = 145/247 (58%), Positives = 173/247 (70%), Gaps = 3/247 (1%)
 Frame = +1

Query: 265 EETADSPKSVLEEEGICNVKSELAVSEENETPQINVEDDTCLPLELEAKNGDTFLITETM 444
           + +ADSP SVLE+E  C  K ++ + +     ++  E++  LP E   KN D+ LI + +
Sbjct: 6   DASADSPTSVLEDEETCEEKIDVKLDKS----EVKSEEEI-LPDE---KNEDSLLIPKAL 57

Query: 445 -EKEENLLRARAKEENLEQEVAENAWGS--ELRFSKLDELLTQTQLYSQFLLEKMDAITF 615
            E EE LL  R K+E  E+E A     +    + +KLDELLTQTQLYSQFLLEKMD IT 
Sbjct: 58  TEVEEKLLEDRVKKEEAEKERAAEQLPNLNNTQITKLDELLTQTQLYSQFLLEKMDNITL 117

Query: 616 NNSENTPEVENEAKGTKGNRARKRKATTHYNNRKAKTAVRAMLTRSQEAVTPEDTSLTDE 795
             +E   E   E KG    R RKRKAT  YNN+KAK AV+AMLTRS+E    ED  LT+E
Sbjct: 118 IGAEQQTETVEEKKG----RGRKRKATATYNNKKAKRAVQAMLTRSKEGEKTEDVDLTEE 173

Query: 796 QRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSH 975
           +R EKEQ ELVPL+TGG+LK YQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL+H
Sbjct: 174 ERVEKEQKELVPLLTGGQLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAH 233

Query: 976 LKGKGLD 996
           LKG GLD
Sbjct: 234 LKGNGLD 240


>ref|XP_003560489.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Brachypodium
           distachyon]
          Length = 824

 Score =  250 bits (639), Expect = 5e-64
 Identities = 159/306 (51%), Positives = 190/306 (62%), Gaps = 52/306 (16%)
 Frame = +1

Query: 232 EMEGEMENRIKEETA---------DSPKSVLEEEGICNVKSE------------------ 330
           EM   +EN +K E+A         DSP SVLE+E +   K E                  
Sbjct: 4   EMVVAVENGVKMESAAAATTDADADSPISVLEDEKMSESKDEKASRFVDASTSLPVKFEA 63

Query: 331 -----------------LAVSEENETPQINVEDDTCLPLELEAKNGDTFLITETMEKEEN 459
                            L  S + ET    ++  T LP++LEAKNGD   ITE M KEE 
Sbjct: 64  NGGEVHPIVQALNAEEALLQSVKVETADEYLDASTSLPIDLEAKNGDASFITEVMSKEEE 123

Query: 460 -LLRARAKEENLEQEV-----AENAWGSELRFSKLDELLTQTQLYSQFLLEKMDAITFNN 621
            L +AR KEE  E+E      A++A+  + RFSKLDELLTQTQL+S+FLLEKM+ IT   
Sbjct: 124 QLYQARLKEEEEEEEAKTKEAAKHAFDPKARFSKLDELLTQTQLFSEFLLEKMEQITDKG 183

Query: 622 SENTPEVENEAKGTKGNRARKRKATT--HYNNRKAKTAVRAMLTRSQEAVTPEDTSLTDE 795
            E   E E   +  KG R RKRKA +   YN++KAKTAV AMLTRSQE  + +D  LT+E
Sbjct: 184 VEVKDEEEPVEEPQKG-RGRKRKANSKPQYNDKKAKTAVAAMLTRSQEDRSADDGILTEE 242

Query: 796 QRAEKEQAELVPLVTGGKLKHYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSH 975
           ++ E EQA+LVPL+TGGKLK YQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL+H
Sbjct: 243 EKCEIEQAKLVPLMTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAH 302

Query: 976 LKGKGL 993
           LKG GL
Sbjct: 303 LKGNGL 308