BLASTX nr result

ID: Zingiber23_contig00031522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00031522
         (445 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]...    66   5e-09
gb|EXC35351.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Moru...    59   7e-07

>ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
           gi|223539047|gb|EEF40643.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 586

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
 Frame = -2

Query: 402 SSLTASQKSIMSSEVEKREYMSGSTTSMKKRTRHSTCSQLTLKSFFKQ-PKTVGTCDDDS 226
           S  T S  +IM   ++ R   S  T   KK+ R S CSQL+L+SFF++ P T    ++ +
Sbjct: 399 SDQTCSDSTIM---LQSRHINSMHTEGTKKKARKSQCSQLSLRSFFQRTPNTRSGAENTA 455

Query: 225 LRGDATSQNFYSEKDAEEVSQMMEQEVNQDLQNNCEMSATSVNTYDDDSEISFPCERESN 46
           L    + +N  +       S+   Q+ + +   +C ++++S  T D D   + P E+E N
Sbjct: 456 LDISHSQENVSNSNSPP--SETASQDDHNNTPGHCGLNSSS-GTQDQDEINNGPSEKEKN 512

Query: 45  SSAVIEWQKIQQKMK 1
           + A++EWQ+IQQ M+
Sbjct: 513 NVALLEWQRIQQLMQ 527


>gb|EXC35351.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Morus notabilis]
          Length = 606

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
 Frame = -2

Query: 330 TTSMKKRTRHSTCSQLTLKSFFKQPKTVGTCDDDSLRGDATSQNFYS---EKDAEEVSQM 160
           T + KK+ + +  SQLTLKSFF++   +    D+ +   A+  +F     + +   + + 
Sbjct: 437 TATTKKKAKKNQWSQLTLKSFFQKSTILSNSIDNEIDTSASRADFVEPSHQSNDPPIGED 496

Query: 159 MEQEVNQ-DLQNNCEMSATSVNTYDDDSEISFPCERESNSSAVIEWQKIQQKMK 1
             + +NQ D  N C+ + +S +T+D D   +  C  E N+ A++EWQ+IQQ M+
Sbjct: 497 QSENINQRDGPNQCDFN-SSASTWDQDEVKN--CSSEKNTVALMEWQRIQQMMQ 547


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