BLASTX nr result
ID: Zingiber23_contig00031345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00031345
(224 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [S... 91 2e-16
gb|EMT07097.1| hypothetical protein F775_19185 [Aegilops tauschii] 90 3e-16
ref|XP_004987140.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea m... 87 2e-15
ref|XP_006656923.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
gb|EOX91401.1| Pentatricopeptide repeat superfamily protein, put... 70 2e-10
ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group] g... 69 5e-10
gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indi... 69 5e-10
emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera] 69 9e-10
gb|EMJ04252.1| hypothetical protein PRUPE_ppa022952mg [Prunus pe... 67 3e-09
ref|XP_002307262.2| hypothetical protein POPTR_0005s18110g [Popu... 62 8e-08
gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabid... 59 9e-07
ref|NP_186882.2| pentatricopeptide repeat-containing protein [Ar... 59 9e-07
gb|ESW11246.1| hypothetical protein PHAVU_008G013900g, partial [... 57 2e-06
ref|XP_004289220.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays] 56 6e-06
dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 6e-06
ref|XP_002884315.1| pentatricopeptide repeat-containing protein ... 56 6e-06
>ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein
SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/74 (59%), Positives = 57/74 (77%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I GF++ GD+E+S+TLF M E V FDLVTLIG++SS ++EDA G H+
Sbjct: 509 LISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHS 568
Query: 181 LAIKTGCSSDTSLT 222
LAIK+GC SD SLT
Sbjct: 569 LAIKSGCISDVSLT 582
>gb|EMT07097.1| hypothetical protein F775_19185 [Aegilops tauschii]
Length = 804
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I G+++ GD E+S+ LF M Q ++FD+VTLIG+ SS +AEDA G H+
Sbjct: 326 LISWNTIISGYAEAGDAEASVRLFRQMRQADLQFDVVTLIGLTSSISVAEDATIGESLHS 385
Query: 181 LAIKTGCSSDTSLT 222
LA+K+GCS+D SLT
Sbjct: 386 LAVKSGCSTDVSLT 399
>ref|XP_004987140.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Setaria italica]
Length = 988
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I GF++ GD+E+S+ LF M E V+FDLVTLIG++SS +E+A G H+
Sbjct: 508 LISWNTMISGFAEVGDSEASLMLFCQMCHEEVQFDLVTLIGVISSLSASENATVGESVHS 567
Query: 181 LAIKTGCSSDTSLT 222
LAIK+GC+SD SLT
Sbjct: 568 LAIKSGCNSDVSLT 581
>ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I G+++ D E+S+ LF M QEG++FD+VTLIG++SS +AED G H+
Sbjct: 509 LISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHS 568
Query: 181 LAIKTGCSSDTSLT 222
LA+K+GC+ D SLT
Sbjct: 569 LAVKSGCNMDISLT 582
>tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
Length = 1925
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I GF++ GD+++ + LF M E V+FDLVTLIG++SSF + DA G H+
Sbjct: 473 LISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHS 532
Query: 181 LAIKTGCSSDTSLT 222
LAIK+GC+SD SLT
Sbjct: 533 LAIKSGCNSDVSLT 546
>ref|XP_006656923.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Oryza brachyantha]
Length = 823
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I GF++ GD+ S +TLF M G++FDLVTLI +++S ED G H+
Sbjct: 343 LISWNTIISGFAENGDSMSCLTLFCQMRLSGIQFDLVTLIALINSLSATEDTTIGELLHS 402
Query: 181 LAIKTGCSSDTSL 219
LA+K+GCS D S+
Sbjct: 403 LAVKSGCSFDVSV 415
>gb|EOX91401.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 950
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +1
Query: 4 ISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHAL 183
+SWNTLI G+ +G E + + H M +EG + D V+L+ I+SS+ +E+ G H
Sbjct: 472 VSWNTLISGYVHSGQKEKANMILHQMQKEGEKLDSVSLLSILSSYTESENFRQGTMLHGY 531
Query: 184 AIKTGCSSDTSLT 222
AIKTGC SD SLT
Sbjct: 532 AIKTGCDSDVSLT 544
>ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = +1
Query: 4 ISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHAL 183
ISWNTLI G GDT+ ++ L H M QE + DLVTLI I+ +AE+ GM H
Sbjct: 525 ISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGY 584
Query: 184 AIKTGCSSDTSL 219
AIKTG + D SL
Sbjct: 585 AIKTGFACDVSL 596
>ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like
[Oryza sativa Japonica Group]
gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa
Japonica Group] gi|125597005|gb|EAZ36785.1| hypothetical
protein OsJ_21122 [Oryza sativa Japonica Group]
Length = 992
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I GF++ GD+ + + F M ++FDLVTLI ++SS ED G H+
Sbjct: 511 LISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHS 570
Query: 181 LAIKTGCSSDTSL 219
LAI++GC+ D S+
Sbjct: 571 LAIRSGCNLDVSV 583
>gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
Length = 992
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
+ISWNT+I GF++ GD+ + + F M ++FDLVTLI ++SS ED G H+
Sbjct: 511 LISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHS 570
Query: 181 LAIKTGCSSDTSL 219
LAI++GC+ D S+
Sbjct: 571 LAIRSGCNLDVSV 583
>emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = +1
Query: 4 ISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHAL 183
ISWNTLI G GDT+ ++ L H M QE + DLVTLI I+ + E+ GM H
Sbjct: 684 ISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGY 743
Query: 184 AIKTGCSSDTSL 219
AIKTG + D SL
Sbjct: 744 AIKTGFACDVSL 755
>gb|EMJ04252.1| hypothetical protein PRUPE_ppa022952mg [Prunus persica]
Length = 912
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +1
Query: 4 ISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHAL 183
I+WNTLI G+ E ++ ++H M +EG + DLVTLI I+ SF E+ GM H
Sbjct: 470 ITWNTLISSCVHRGEMEKAVPIYHQMQKEGFKLDLVTLISILPSFSEKENLGQGMAIHGY 529
Query: 184 AIKTGCSSDTSL 219
AIK G SSD S+
Sbjct: 530 AIKDGFSSDISM 541
>ref|XP_002307262.2| hypothetical protein POPTR_0005s18110g [Populus trichocarpa]
gi|550339216|gb|EEE94258.2| hypothetical protein
POPTR_0005s18110g [Populus trichocarpa]
Length = 928
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = +1
Query: 4 ISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHAL 183
+SWNTLI G +G+ E ++ L H M +EGV DLVTLI ++ + + GM H
Sbjct: 488 VSWNTLISGCVHSGEMEKAVDLGHSMQKEGVALDLVTLISVLPVYCDRDYLGHGMTLHGH 547
Query: 184 AIKTGCSSDTSL 219
AIK G +SD SL
Sbjct: 548 AIKKGFASDVSL 559
>gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
V+SWN+++ G+ + G++ SI +F MG+EG+ FD T I+ ED + GM H
Sbjct: 103 VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG 162
Query: 181 LAIKTGCSSD 210
+ ++ GC +D
Sbjct: 163 IVVRVGCDTD 172
>ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g02330 gi|332640272|gb|AEE73793.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
V+SWN+++ G+ + G++ SI +F MG+EG+ FD T I+ ED + GM H
Sbjct: 145 VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG 204
Query: 181 LAIKTGCSSD 210
+ ++ GC +D
Sbjct: 205 IVVRVGCDTD 214
>gb|ESW11246.1| hypothetical protein PHAVU_008G013900g, partial [Phaseolus
vulgaris]
Length = 834
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
V++WNTLI GF+K GD + +FH + G++ D T++ +VS+ + +D G FH
Sbjct: 442 VVAWNTLINGFTKFGDPRLAFKMFHTLQLTGIQPDSGTMVSLVSACSLLDDLDLGSCFHG 501
Query: 181 LAIKTGCSSD 210
IK+G D
Sbjct: 502 NTIKSGFECD 511
>ref|XP_004289220.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 856
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +1
Query: 4 ISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHAL 183
I+WNTLI G+ E ++ L++ M +EG + DLVTL I+ + GM FH
Sbjct: 378 ITWNTLISACVHHGELEEAVALYYQMQKEGFKLDLVTLTSILPGCSDEGNLGQGMAFHGY 437
Query: 184 AIKTGCSSDTSL 219
AIK G +SD SL
Sbjct: 438 AIKHGFASDISL 449
>gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
V+SWNTLI G+ + G +S+ L M + GV D TL ++ S +D A G+ HA
Sbjct: 116 VVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHA 175
Query: 181 LAIKTGCSSD 210
LA+KTG +D
Sbjct: 176 LAVKTGLETD 185
>dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/72 (34%), Positives = 44/72 (61%)
Frame = +1
Query: 4 ISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHAL 183
I+WN ++ GF+++G E ++ +F M Q GV++++ T + +S+ D G HA
Sbjct: 513 ITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHAT 572
Query: 184 AIKTGCSSDTSL 219
IKTGC+S+T +
Sbjct: 573 VIKTGCTSETEV 584
>ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330155|gb|EFH60574.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 861
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +1
Query: 1 VISWNTLIGGFSKTGDTESSITLFHMMGQEGVRFDLVTLIGIVSSFYIAEDAACGMFFHA 180
V+SWN+++ G+ + G+T SI +F MG+ G FD T I+ ED + GM H
Sbjct: 103 VVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHG 162
Query: 181 LAIKTGCSSD 210
+ ++ GC +D
Sbjct: 163 VVVRVGCDTD 172