BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00031280
         (721 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indi...   258   1e-66
ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group] g...   258   1e-66
ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g...   257   2e-66
ref|XP_004984228.1| PREDICTED: KH domain-containing protein At4g...   256   4e-66
ref|NP_001183640.1| hypothetical protein [Zea mays] gi|238013618...   253   3e-65
gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays] g...   252   1e-64
gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]        252   1e-64
gb|EMJ16720.1| hypothetical protein PRUPE_ppa003758mg [Prunus pe...   248   2e-63
ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g...   246   5e-63
ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g...   245   1e-62
gb|EXB31947.1| KH domain-containing protein [Morus notabilis]         244   2e-62
gb|EOY03515.1| RNA-binding KH domain-containing protein isoform ...   244   2e-62
gb|EOY03514.1| RNA-binding KH domain-containing protein isoform ...   244   2e-62
gb|EOY03512.1| RNA-binding KH domain-containing protein isoform ...   244   2e-62
gb|EOY03508.1| RNA-binding KH domain-containing protein isoform ...   244   2e-62
gb|EOY03507.1| RNA-binding KH domain-containing protein isoform ...   244   2e-62
ref|XP_006482620.1| PREDICTED: KH domain-containing protein At4g...   244   2e-62
ref|XP_006431190.1| hypothetical protein CICLE_v10011418mg [Citr...   244   2e-62
ref|XP_006431189.1| hypothetical protein CICLE_v10011418mg [Citr...   244   2e-62
ref|XP_006431188.1| hypothetical protein CICLE_v10011418mg [Citr...   244   2e-62

>gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
          Length = 542

 Score =  258 bits (660), Expect = 1e-66
 Identities = 134/217 (61%), Positives = 159/217 (73%)
 Frame = -3

Query: 653 GRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXXXX 474
           G RN++GKR   HSD++ENGG KRRNPGD  DTY PG +DTV+RYLCP            
Sbjct: 5   GHRNSHGKR---HSDYAENGGGKRRNPGD--DTYAPGPDDTVYRYLCPSRKIGSIIGRGG 59

Query: 473 XIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHER 294
            I KQ+R+DTQAKIRIGE+V GCDERVI IFS+  ETN   D++DK+CPAQDALF+VHE+
Sbjct: 60  EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119

Query: 293 LVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRL 114
           L  D+ +  E+SD    QVT RLLVPSD               IRSDTGA +R+L N+ L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179

Query: 113 PACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
           PACAISGDELLQISG+++VV+KALLQVSSRLHDNPSR
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSR 216



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
 Frame = -3

Query: 605 SENGGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQ 441
           S  GG K    GD    Y P  E++       R LC              I+KQ+R ++ 
Sbjct: 251 SSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESG 310

Query: 440 AKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEED 261
           A I++  +    ++  I   S +E    FED    + P  +A   +  R         E 
Sbjct: 311 AFIKVDSS--NTEDDCIITVSAKE---FFEDP---VSPTINAAVHLQPR-------CSEK 355

Query: 260 SDGDS--PQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDE 87
           +D +S  P  T RLLV +                IR  + A +RIL  + +P  A   +E
Sbjct: 356 TDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEE 415

Query: 86  LLQISGEASVVKKALLQVSSRLHDN 12
           ++QISG+  VV+ ALLQ+++RL  N
Sbjct: 416 MVQISGDLDVVRHALLQITTRLKAN 440


>ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
           gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic
           acid binding protein [Oryza sativa Japonica Group]
           gi|108708431|gb|ABF96226.1| KH domain-containing
           protein, putative, expressed [Oryza sativa Japonica
           Group] gi|108708432|gb|ABF96227.1| KH domain-containing
           protein, putative, expressed [Oryza sativa Japonica
           Group] gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza
           sativa Japonica Group] gi|125586438|gb|EAZ27102.1|
           hypothetical protein OsJ_11034 [Oryza sativa Japonica
           Group] gi|215686826|dbj|BAG89676.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215695345|dbj|BAG90536.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215704897|dbj|BAG94925.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 542

 Score =  258 bits (660), Expect = 1e-66
 Identities = 134/217 (61%), Positives = 159/217 (73%)
 Frame = -3

Query: 653 GRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXXXX 474
           G RN++GKR   HSD++ENGG KRRNPGD  DTY PG +DTV+RYLCP            
Sbjct: 5   GHRNSHGKR---HSDYAENGGGKRRNPGD--DTYAPGPDDTVYRYLCPSRKIGSIIGRGG 59

Query: 473 XIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHER 294
            I KQ+R+DTQAKIRIGE+V GCDERVI IFS+  ETN   D++DK+CPAQDALF+VHE+
Sbjct: 60  EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119

Query: 293 LVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRL 114
           L  D+ +  E+SD    QVT RLLVPSD               IRSDTGA +R+L N+ L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179

Query: 113 PACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
           PACAISGDELLQISG+++VV+KALLQVSSRLHDNPSR
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSR 216



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
 Frame = -3

Query: 605 SENGGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQ 441
           S  GG K    GD    Y P  E++       R LC              I+KQ+R ++ 
Sbjct: 251 SSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESG 310

Query: 440 AKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEED 261
           A I++  +    ++  I   S +E    FED    + P  +A   +  R         E 
Sbjct: 311 AFIKVDSS--NTEDDCIITVSAKE---FFEDP---VSPTINAAVHLQPR-------CSEK 355

Query: 260 SDGDS--PQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDE 87
           +D +S  P  T RLLV +                IR  + A +RIL  + +P  A   +E
Sbjct: 356 TDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEE 415

Query: 86  LLQISGEASVVKKALLQVSSRLHDN 12
           ++QISG+  VV+ ALLQ+++RL  N
Sbjct: 416 MVQISGDLDVVRHALLQITTRLKAN 440


>ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
           [Brachypodium distachyon]
          Length = 542

 Score =  257 bits (657), Expect = 2e-66
 Identities = 134/217 (61%), Positives = 159/217 (73%)
 Frame = -3

Query: 653 GRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXXXX 474
           G RN++GKR   HSD+SENGG KRRNPGD  DTY PG +DTV+RYLC             
Sbjct: 5   GHRNSHGKR---HSDYSENGGGKRRNPGD--DTYAPGPDDTVYRYLCTSRKIGSIIGRGG 59

Query: 473 XIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHER 294
            I KQLR+DTQAKIRIGE+V GCDERVI IFS+  ETN  ED++DK+CPAQDALF+VHE+
Sbjct: 60  EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEK 119

Query: 293 LVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRL 114
           L+ D+   +E+++    QVT RLLVPSD               IRSDTG+Q+R+L N+RL
Sbjct: 120 LIADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERL 179

Query: 113 PACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
           PAC ISGDELLQISG+  VV+KALLQVSSRLHDNPSR
Sbjct: 180 PACGISGDELLQISGDPLVVRKALLQVSSRLHDNPSR 216



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
 Frame = -3

Query: 605 SENGGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQ 441
           S  GG K    GD    Y P  ED+       R LC              I+KQ+R ++ 
Sbjct: 251 SPYGGYKGDMVGDWPSIYQPRREDSSAKDFSLRLLCAASDVGGVIGKGGGIIKQIRQESG 310

Query: 440 AKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEED 261
           A I++  +    ++  I   S +E    FED    + P  DA  ++  +        + D
Sbjct: 311 AFIKVDSS--SAEDDCIITVSAKE---FFEDP---VSPTIDATVRLQPKCSE-----KTD 357

Query: 260 SDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELL 81
            +   P  T RLLV +                IR  + A +RIL  + +P  A   +E++
Sbjct: 358 PESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMV 417

Query: 80  QISGEASVVKKALLQVSSRLHDN 12
           QISG+  V + AL+Q+++RL  N
Sbjct: 418 QISGDLEVARHALVQITTRLKAN 440


>ref|XP_004984228.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Setaria italica] gi|514819059|ref|XP_004984229.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Setaria italica]
           gi|514819061|ref|XP_004984230.1| PREDICTED: KH
           domain-containing protein At4g18375-like isoform X3
           [Setaria italica] gi|514819063|ref|XP_004984231.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X4 [Setaria italica]
          Length = 541

 Score =  256 bits (655), Expect = 4e-66
 Identities = 134/219 (61%), Positives = 161/219 (73%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG RN++GKR   HSD++ENGG KRRNPGD  D+Y PG +DTV+RYLC           
Sbjct: 1   MAGHRNSHGKR---HSDYAENGGGKRRNPGD--DSYAPGPDDTVYRYLCASRKIGSIIGR 55

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              I KQLR++TQAKIRIGE+V GC+ERVI IFS+  ETN  +D++DK+CPAQDALF+VH
Sbjct: 56  GGEIAKQLRAETQAKIRIGESVPGCEERVITIFSSSRETNTIDDAEDKVCPAQDALFRVH 115

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           ERL +DE    EDS+   PQVT RLLVPSD               IRS+TGAQ+R+L ND
Sbjct: 116 ERLASDEGPGNEDSEEVLPQVTVRLLVPSDQIGCIIGKGGHIIQGIRSETGAQIRVLSND 175

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            +PACAI+GDELLQISG+A VV+KAL QVSSRLHDNPS+
Sbjct: 176 HIPACAINGDELLQISGDAVVVRKALHQVSSRLHDNPSK 214



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 7/202 (3%)
 Frame = -3

Query: 596 GGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAKI 432
           GG K    GD    Y P  +++       R LC              I+KQ+R ++ A I
Sbjct: 252 GGYKGEVAGDWPSVYQPRRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGAFI 311

Query: 431 RIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSDG 252
           ++  +  G ++  I   S +E    FED    + P  DA  ++  R         E SD 
Sbjct: 312 KVDSSNSGAEDDCIITVSAKE---FFEDP---VSPTIDAAIRLQPR-------CSEKSDA 358

Query: 251 DS--PQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELLQ 78
           +S  P  T RLLV +                IR  + A +RIL  + +P  A   +E++Q
Sbjct: 359 ESAEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRHSRANIRILSKENVPKVAAEDEEMVQ 418

Query: 77  ISGEASVVKKALLQVSSRLHDN 12
           ISG   V + ALLQ+++RL  N
Sbjct: 419 ISGGLDVARHALLQIAARLKAN 440


>ref|NP_001183640.1| hypothetical protein [Zea mays] gi|238013618|gb|ACR37844.1| unknown
           [Zea mays] gi|414867002|tpg|DAA45559.1| TPA:
           hypothetical protein ZEAMMB73_773291 [Zea mays]
           gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein
           ZEAMMB73_773291 [Zea mays] gi|414867004|tpg|DAA45561.1|
           TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
          Length = 541

 Score =  253 bits (647), Expect = 3e-65
 Identities = 133/219 (60%), Positives = 160/219 (73%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG RN++GKR    SD +ENGGSKRRNPGD  DTY PG +DTV+RYLC           
Sbjct: 1   MAGHRNSHGKRQ---SDFTENGGSKRRNPGD--DTYAPGPDDTVYRYLCASRKIGSIIGR 55

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              I KQLR++TQAKIRIGE+V GCDERV+ IFST  +TN  + ++D++CPAQDALF+VH
Sbjct: 56  GGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNTIDGAEDEVCPAQDALFRVH 115

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           ERL +DE +  EDS+  SPQVT RLLVPSD               IRS+TGAQ+R+L ND
Sbjct: 116 ERLASDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSND 175

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            +PACAISGDELLQISG+  VV+KAL QVSSRLH+NPS+
Sbjct: 176 HIPACAISGDELLQISGDTVVVRKALHQVSSRLHNNPSK 214



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 7/202 (3%)
 Frame = -3

Query: 596 GGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAKI 432
           GG K    GD    Y P  +++       R LC              I+KQ+R ++ A I
Sbjct: 252 GGYKGDVAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALI 311

Query: 431 RIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSDG 252
           ++  +    D+  I   S +E    FED    + P  DA  ++  R         E SD 
Sbjct: 312 KVASSNSDPDDDCIITVSAKE---FFEDP---VSPTIDAAVRLQPR-------CSEKSDL 358

Query: 251 DSPQ--VTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELLQ 78
           +S +   T RLLV +                IR  + A VRIL  + +P  A   DE++Q
Sbjct: 359 ESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRILSKENVPKVAAEDDEMVQ 418

Query: 77  ISGEASVVKKALLQVSSRLHDN 12
           I+G   V + AL+Q+++RL  N
Sbjct: 419 ITGGLDVARNALVQIATRLKAN 440


>gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
           gi|413955312|gb|AFW87961.1| hypothetical protein
           ZEAMMB73_110576 [Zea mays]
          Length = 543

 Score =  252 bits (643), Expect = 1e-64
 Identities = 132/219 (60%), Positives = 158/219 (72%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           M+G RN++GKR   +SD++E GG KRRNPGD  DTY PG +DTV+RYLC           
Sbjct: 1   MSGHRNSHGKR---YSDYTETGGGKRRNPGD--DTYAPGPDDTVYRYLCASRKIGSIIGR 55

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              I KQLR++TQAKIRIGE+V GC+ERVI IFS+   TN  +D++DK+CPAQDALF+VH
Sbjct: 56  GGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVH 115

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           ERL TDE    EDS+  SPQVT RLLVPSD               IRS+TGAQ+R+L  D
Sbjct: 116 ERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKD 175

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            +PACAISGDELLQISG+  VVKKAL QVSSRLH+NPS+
Sbjct: 176 HIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSK 214



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
 Frame = -3

Query: 596 GGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAKI 432
           GG K    GD    Y P  +++       R LC              I+KQ+R ++ A I
Sbjct: 252 GGYKGDVAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALI 311

Query: 431 RIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSDG 252
           ++  +    D+  I   S +E    FED    + P  DA  ++  R        + DS+ 
Sbjct: 312 KVASSNSDPDDDCIITVSAKE---FFEDP---VSPTIDAAVRLQLRCSE-----KSDSEL 360

Query: 251 DSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELLQIS 72
                T RLLV +                IR  + A +RIL  + +P  A   +E++QIS
Sbjct: 361 AEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQIS 420

Query: 71  GEASVVKKALLQVSSRLHDN 12
           G   V + AL+Q+++RL  N
Sbjct: 421 GGLDVARHALVQIATRLKAN 440


>gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
          Length = 528

 Score =  252 bits (643), Expect = 1e-64
 Identities = 132/219 (60%), Positives = 158/219 (72%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           M+G RN++GKR   +SD++E GG KRRNPGD  DTY PG +DTV+RYLC           
Sbjct: 1   MSGHRNSHGKR---YSDYTETGGGKRRNPGD--DTYAPGPDDTVYRYLCASRKIGSIIGR 55

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              I KQLR++TQAKIRIGE+V GC+ERVI IFS+   TN  +D++DK+CPAQDALF+VH
Sbjct: 56  GGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVH 115

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           ERL TDE    EDS+  SPQVT RLLVPSD               IRS+TGAQ+R+L  D
Sbjct: 116 ERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKD 175

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            +PACAISGDELLQISG+  VVKKAL QVSSRLH+NPS+
Sbjct: 176 HIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSK 214



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
 Frame = -3

Query: 596 GGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAKI 432
           GG K    GD    Y P  +++       R LC              I+KQ+R ++ A I
Sbjct: 252 GGYKGDVAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALI 311

Query: 431 RIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSDG 252
           ++  +    D+  I   S +E    FED    + P  DA  ++  R        + DS+ 
Sbjct: 312 KVASSNSDPDDDCIITVSAKE---FFEDP---VSPTIDAAVRLQLRCSE-----KSDSEL 360

Query: 251 DSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELLQIS 72
                T RLLV +                IR  + A +RIL  + +P  A   +E++QIS
Sbjct: 361 AEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQIS 420

Query: 71  GEASVVKKALLQVSSRLHDN 12
           G   V + AL+Q+++RL  N
Sbjct: 421 GGLDVARHALVQIATRLKAN 440


>gb|EMJ16720.1| hypothetical protein PRUPE_ppa003758mg [Prunus persica]
          Length = 551

 Score =  248 bits (632), Expect = 2e-63
 Identities = 127/221 (57%), Positives = 163/221 (73%), Gaps = 2/221 (0%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGG--SKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXX 486
           MAG+RN+ GKRS+S SD+++NGG  +KRRNPG+ER+ +I   EDTV+RYLCP        
Sbjct: 1   MAGQRNSYGKRSHSQSDYADNGGGGNKRRNPGEEREQFIIDAEDTVYRYLCPVKKIGSII 60

Query: 485 XXXXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFK 306
                IVKQLR DT++KIRIGETV GC+ERV+ ++S  +ETN FED    + PAQDALF+
Sbjct: 61  GRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTVYSASDETNGFEDGGAYVAPAQDALFR 120

Query: 305 VHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILK 126
           VHER++ +++  +ED+DG S  V ARLLVPSD               IRS+TGAQ+RILK
Sbjct: 121 VHERVIAEDLHNDEDADGGSHHVIARLLVPSDQIGCIIGKGGQIVQNIRSETGAQIRILK 180

Query: 125 NDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
           +D LPACA++ DEL+QISGEA +VKKAL Q++SRLHDNPSR
Sbjct: 181 DDHLPACALNSDELVQISGEAPLVKKALFQIASRLHDNPSR 221



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 46/171 (26%), Positives = 75/171 (43%)
 Frame = -3

Query: 524 RYLCPXXXXXXXXXXXXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDS 345
           R +CP             I+ Q+R D+ A I++  +    D+ +I + +        E  
Sbjct: 288 RLVCPTANIGGVIGKGGVIINQIRQDSGAVIKVDSSTSEGDDCLITVSAK-------EFF 340

Query: 344 DDKMCPAQDALFKVHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXX 165
           +D      +A  ++  R  +++V    + D      T RLLVP+                
Sbjct: 341 EDPYSATVEAAVRLQPRC-SEKV----ERDSGIISFTTRLLVPTSRIGCLIGKGGAIVTE 395

Query: 164 IRSDTGAQVRILKNDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDN 12
           +R  T A +RIL  + LP  A   DE++QISG+  + K AL+QV +RL  N
Sbjct: 396 MRRITKANIRILSKESLPKIASEDDEMVQISGDLDIAKDALIQVVTRLRAN 446


>ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
           gi|296082939|emb|CBI22240.3| unnamed protein product
           [Vitis vinifera]
          Length = 548

 Score =  246 bits (628), Expect = 5e-63
 Identities = 126/219 (57%), Positives = 163/219 (74%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKR++S SD+ +NGG+KRRNPGD+RD +    EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR DT++KIRIGETV GC+ERV+ I+S+ +ETN F+DSD  + PAQDALF+VH
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +R+V++EV  E+    ++ QVT RLLVPSD               IRS++GAQVRILK+D
Sbjct: 121 DRVVSEEVHGEDSE--EASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDD 178

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+S DEL+QISGE S+V+KAL Q++SRLHDNPSR
Sbjct: 179 HLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSR 217



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
 Frame = -3

Query: 524 RYLCPXXXXXXXXXXXXXIVKQLRSDTQAKIRIGETVRG-CDERVIAIFSTREETNIFED 348
           R +CP             I+ Q+R ++ A I++  T     D+ +IAI S +E    FED
Sbjct: 285 RLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSAAEADDCLIAI-SAKE---FFED 340

Query: 347 SDDKMCPAQDALFKVHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXX 168
           +     P  +A  ++  R  +++V    + D      T RLLVP+               
Sbjct: 341 T---FSPTIEAAVRLQPRC-SEKV----ERDSGIVSFTTRLLVPTSRIGCLIGKGGAIIT 392

Query: 167 XIRSDTGAQVRILKNDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDN 12
            +R  T A +RIL  + LP  A   DE++QI+G+  V K AL+QV++RL  N
Sbjct: 393 EMRKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVAKDALIQVTTRLRAN 444


>ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
           [Brachypodium distachyon]
          Length = 538

 Score =  245 bits (625), Expect = 1e-62
 Identities = 129/217 (59%), Positives = 156/217 (71%)
 Frame = -3

Query: 653 GRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXXXX 474
           G RN++GKR   +SD++ENGG KRRNPGD  DTY P  +DTV+RYLC             
Sbjct: 5   GHRNSHGKR---YSDYAENGGGKRRNPGD--DTYAPCPDDTVYRYLCASRKIGSIIGRGG 59

Query: 473 XIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHER 294
            I KQLR+DTQAKIRIGE+V GCDERVI IFS+  ETN  ED++DK+CPAQDALF+VHE+
Sbjct: 60  EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTVEDTEDKVCPAQDALFRVHEK 119

Query: 293 LVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRL 114
           L+TD+   +E+++    QV  RLLVPSD               IRSDTG+ +R+L  + L
Sbjct: 120 LITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHL 179

Query: 113 PACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
           PACAISGDELLQISG+  VV+KALLQVSSRLHDNPSR
Sbjct: 180 PACAISGDELLQISGDPLVVRKALLQVSSRLHDNPSR 216



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 5/200 (2%)
 Frame = -3

Query: 596 GGSKRRNPGDERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAKI 432
           GG K    GD    Y P  E++       R LC              I+KQ+R ++ A I
Sbjct: 254 GGYKGDMVGDWPSIYQPRREESSAKEFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFI 313

Query: 431 RIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSDG 252
           ++  +    ++  I   S +E    FED    + P  DA  ++  R        + D + 
Sbjct: 314 KVDSS--SAEDDCIITVSAKE---FFEDP---ISPTIDATVRLQPRCSE-----KTDPES 360

Query: 251 DSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELLQIS 72
             P  T RLLV +                IR  + A +RIL  + +P  A   +E++QIS
Sbjct: 361 GEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQIS 420

Query: 71  GEASVVKKALLQVSSRLHDN 12
           G+  V K AL+Q+++RL  N
Sbjct: 421 GDLDVAKHALVQITTRLKAN 440


>gb|EXB31947.1| KH domain-containing protein [Morus notabilis]
          Length = 667

 Score =  244 bits (624), Expect = 2e-62
 Identities = 128/219 (58%), Positives = 163/219 (74%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKR++S SD+SENGG KRRNPG+ER+ ++   EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRAHSQSDYSENGGHKRRNPGEEREQFVIDSEDTVYRYLCPVKKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR DT++KIRIGETV G +ERV+ I+S  EE+N  E   + +CPAQDALF+VH
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSEERVVTIYSMSEESNAVE-GGNHVCPAQDALFRVH 119

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           ER+V +++  +EDS+G S QVTARLLVPSD               IRSDTGAQ+RILK++
Sbjct: 120 ERVVAEDLHGDEDSEG-SHQVTARLLVPSDQIGCIIGKGGQIVQNIRSDTGAQIRILKDE 178

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA++ DEL+QISG+A VVKKAL Q++SRLHDNPSR
Sbjct: 179 HLPSCALNSDELVQISGDAPVVKKALYQIASRLHDNPSR 217


>gb|EOY03515.1| RNA-binding KH domain-containing protein isoform 9, partial
           [Theobroma cacao]
          Length = 526

 Score =  244 bits (624), Expect = 2e-62
 Identities = 124/219 (56%), Positives = 167/219 (76%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKR++S SD+SENG +KRRNPGD+R+ ++   EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR++T++KIRIGETV G +ERV+ I+S+R+ETN  ED ++ + PAQDALF+VH
Sbjct: 61  GGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNALEDGNNFVSPAQDALFRVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +++V +++  +EDS+G   QVTARLLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DKVVAEDLHGDEDSEGH--QVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 178

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+S DEL+QISGEA+VVKKAL Q++SRLH+NPSR
Sbjct: 179 HLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSR 217



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 48/171 (28%), Positives = 80/171 (46%)
 Frame = -3

Query: 524 RYLCPXXXXXXXXXXXXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDS 345
           R +CP             I+ Q+R ++ A I++  +    D+ +I + S +E    FED+
Sbjct: 285 RLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITV-SAKE---FFEDT 340

Query: 344 DDKMCPAQDALFKVHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXX 165
                P  +A  ++  R  +++V    + D      T RLLVP+                
Sbjct: 341 ---YSPTIEAAVRLQPRC-SEKV----ERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTE 392

Query: 164 IRSDTGAQVRILKNDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDN 12
           +R  T A +RIL  + LP  A   DE++QI+G+  V K AL+Q+++RL  N
Sbjct: 393 MRRITKANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03514.1| RNA-binding KH domain-containing protein isoform 8, partial
           [Theobroma cacao]
          Length = 537

 Score =  244 bits (624), Expect = 2e-62
 Identities = 124/219 (56%), Positives = 167/219 (76%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKR++S SD+SENG +KRRNPGD+R+ ++   EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR++T++KIRIGETV G +ERV+ I+S+R+ETN  ED ++ + PAQDALF+VH
Sbjct: 61  GGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNALEDGNNFVSPAQDALFRVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +++V +++  +EDS+G   QVTARLLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DKVVAEDLHGDEDSEGH--QVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 178

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+S DEL+QISGEA+VVKKAL Q++SRLH+NPSR
Sbjct: 179 HLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSR 217



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 48/171 (28%), Positives = 80/171 (46%)
 Frame = -3

Query: 524 RYLCPXXXXXXXXXXXXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDS 345
           R +CP             I+ Q+R ++ A I++  +    D+ +I + S +E    FED+
Sbjct: 285 RLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITV-SAKE---FFEDT 340

Query: 344 DDKMCPAQDALFKVHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXX 165
                P  +A  ++  R  +++V    + D      T RLLVP+                
Sbjct: 341 ---YSPTIEAAVRLQPRC-SEKV----ERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTE 392

Query: 164 IRSDTGAQVRILKNDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDN 12
           +R  T A +RIL  + LP  A   DE++QI+G+  V K AL+Q+++RL  N
Sbjct: 393 MRRITKANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03512.1| RNA-binding KH domain-containing protein isoform 6 [Theobroma
           cacao] gi|508711616|gb|EOY03513.1| RNA-binding KH
           domain-containing protein isoform 6 [Theobroma cacao]
          Length = 548

 Score =  244 bits (624), Expect = 2e-62
 Identities = 124/219 (56%), Positives = 167/219 (76%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKR++S SD+SENG +KRRNPGD+R+ ++   EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR++T++KIRIGETV G +ERV+ I+S+R+ETN  ED ++ + PAQDALF+VH
Sbjct: 61  GGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNALEDGNNFVSPAQDALFRVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +++V +++  +EDS+G   QVTARLLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DKVVAEDLHGDEDSEGH--QVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 178

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+S DEL+QISGEA+VVKKAL Q++SRLH+NPSR
Sbjct: 179 HLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSR 217



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 48/171 (28%), Positives = 80/171 (46%)
 Frame = -3

Query: 524 RYLCPXXXXXXXXXXXXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDS 345
           R +CP             I+ Q+R ++ A I++  +    D+ +I + S +E    FED+
Sbjct: 285 RLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITV-SAKE---FFEDT 340

Query: 344 DDKMCPAQDALFKVHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXX 165
                P  +A  ++  R  +++V    + D      T RLLVP+                
Sbjct: 341 ---YSPTIEAAVRLQPRC-SEKV----ERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTE 392

Query: 164 IRSDTGAQVRILKNDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDN 12
           +R  T A +RIL  + LP  A   DE++QI+G+  V K AL+Q+++RL  N
Sbjct: 393 MRRITKANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03508.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma
           cacao]
          Length = 542

 Score =  244 bits (624), Expect = 2e-62
 Identities = 124/219 (56%), Positives = 167/219 (76%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKR++S SD+SENG +KRRNPGD+R+ ++   EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR++T++KIRIGETV G +ERV+ I+S+R+ETN  ED ++ + PAQDALF+VH
Sbjct: 61  GGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNALEDGNNFVSPAQDALFRVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +++V +++  +EDS+G   QVTARLLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DKVVAEDLHGDEDSEGH--QVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 178

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+S DEL+QISGEA+VVKKAL Q++SRLH+NPSR
Sbjct: 179 HLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSR 217



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 48/171 (28%), Positives = 80/171 (46%)
 Frame = -3

Query: 524 RYLCPXXXXXXXXXXXXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDS 345
           R +CP             I+ Q+R ++ A I++  +    D+ +I + S +E    FED+
Sbjct: 285 RLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITV-SAKE---FFEDT 340

Query: 344 DDKMCPAQDALFKVHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXX 165
                P  +A  ++  R  +++V    + D      T RLLVP+                
Sbjct: 341 ---YSPTIEAAVRLQPRC-SEKV----ERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTE 392

Query: 164 IRSDTGAQVRILKNDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDN 12
           +R  T A +RIL  + LP  A   DE++QI+G+  V K AL+Q+++RL  N
Sbjct: 393 MRRITKANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>gb|EOY03507.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
           cacao] gi|508711612|gb|EOY03509.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
           gi|508711614|gb|EOY03511.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
          Length = 547

 Score =  244 bits (624), Expect = 2e-62
 Identities = 124/219 (56%), Positives = 167/219 (76%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKR++S SD+SENG +KRRNPGD+R+ ++   EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRAHSQSDYSENGSNKRRNPGDDREQFVIDSEDTVYRYLCPVRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR++T++KIRIGETV G +ERV+ I+S+R+ETN  ED ++ + PAQDALF+VH
Sbjct: 61  GGEIVKQLRAETKSKIRIGETVPGSEERVVTIYSSRDETNALEDGNNFVSPAQDALFRVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +++V +++  +EDS+G   QVTARLLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DKVVAEDLHGDEDSEGH--QVTARLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 178

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+S DEL+QISGEA+VVKKAL Q++SRLH+NPSR
Sbjct: 179 HLPSCALSTDELVQISGEATVVKKALHQIASRLHENPSR 217



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 48/171 (28%), Positives = 80/171 (46%)
 Frame = -3

Query: 524 RYLCPXXXXXXXXXXXXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDS 345
           R +CP             I+ Q+R ++ A I++  +    D+ +I + S +E    FED+
Sbjct: 285 RLVCPTANIGGVIGKGGAIINQIRQESGAVIKVDSSATEGDDCLITV-SAKE---FFEDT 340

Query: 344 DDKMCPAQDALFKVHERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXX 165
                P  +A  ++  R  +++V    + D      T RLLVP+                
Sbjct: 341 ---YSPTIEAAVRLQPRC-SEKV----ERDSGIISFTTRLLVPTSRIGCLIGKGGSIVTE 392

Query: 164 IRSDTGAQVRILKNDRLPACAISGDELLQISGEASVVKKALLQVSSRLHDN 12
           +R  T A +RIL  + LP  A   DE++QI+G+  V K AL+Q+++RL  N
Sbjct: 393 MRRITKANIRILSKESLPKIASEDDEMVQIAGDLDVAKDALVQITTRLRAN 443


>ref|XP_006482620.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Citrus sinensis] gi|568858155|ref|XP_006482621.1|
           PREDICTED: KH domain-containing protein At4g18375-like
           isoform X2 [Citrus sinensis]
           gi|568858160|ref|XP_006482622.1| PREDICTED: KH
           domain-containing protein At4g18375-like isoform X3
           [Citrus sinensis]
          Length = 546

 Score =  244 bits (623), Expect = 2e-62
 Identities = 126/219 (57%), Positives = 162/219 (73%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKRS+S +D++++G +KRR  GD+RD +I G EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR DT++KIRIGETV G +ERV+ ++S  +ETN FED D  + PAQDALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +R++ +E+  +EDSDG   QVTA+LLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+  DEL+QISGEASVVKKAL Q++SRLHDNPSR
Sbjct: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 8/203 (3%)
 Frame = -3

Query: 596 GGSKRRNPGD-ERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAK 435
           GG K    GD  R  Y    +D        R +CP             I+ Q+R ++ A 
Sbjct: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316

Query: 434 IRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSD 255
           I++  +    D+ +I + S       FED+          L    E +V  +    E  +
Sbjct: 317 IKVDSSSTEGDDCLITVSSKE----FFEDT----------LSATIEAVVRLQPRCSEKIE 362

Query: 254 GDSPQV--TARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELL 81
            DS  +  T RLLVP+                +R  T A +RIL  + LP  A   DE++
Sbjct: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422

Query: 80  QISGEASVVKKALLQVSSRLHDN 12
           QISG+  + K AL+QV +RL  N
Sbjct: 423 QISGDLDLAKDALIQVMTRLRAN 445


>ref|XP_006431190.1| hypothetical protein CICLE_v10011418mg [Citrus clementina]
           gi|567877203|ref|XP_006431191.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|567877213|ref|XP_006431196.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|567877215|ref|XP_006431197.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533247|gb|ESR44430.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533248|gb|ESR44431.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533253|gb|ESR44436.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533254|gb|ESR44437.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
          Length = 532

 Score =  244 bits (623), Expect = 2e-62
 Identities = 126/219 (57%), Positives = 162/219 (73%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKRS+S +D++++G +KRR  GD+RD +I G EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR DT++KIRIGETV G +ERV+ ++S  +ETN FED D  + PAQDALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +R++ +E+  +EDSDG   QVTA+LLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+  DEL+QISGEASVVKKAL Q++SRLHDNPSR
Sbjct: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 8/203 (3%)
 Frame = -3

Query: 596 GGSKRRNPGD-ERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAK 435
           GG K    GD  R  Y    +D        R +CP             I+ Q+R ++ A 
Sbjct: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316

Query: 434 IRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSD 255
           I++  +    D+ +I + S       FED+          L    E +V  +    E  +
Sbjct: 317 IKVDSSSTEGDDCLITVSSKE----FFEDT----------LSATIEAVVRLQPRCSEKIE 362

Query: 254 GDSPQV--TARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELL 81
            DS  +  T RLLVP+                +R  T A +RIL  + LP  A   DE++
Sbjct: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422

Query: 80  QISGEASVVKKALLQVSSRLHDN 12
           QISG+  + K AL+QV +RL  N
Sbjct: 423 QISGDLDLAKDALIQVMTRLRAN 445


>ref|XP_006431189.1| hypothetical protein CICLE_v10011418mg [Citrus clementina]
           gi|567877205|ref|XP_006431192.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|567877207|ref|XP_006431193.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|567877209|ref|XP_006431194.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|567877211|ref|XP_006431195.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533246|gb|ESR44429.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533249|gb|ESR44432.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533250|gb|ESR44433.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533251|gb|ESR44434.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
           gi|557533252|gb|ESR44435.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
          Length = 546

 Score =  244 bits (623), Expect = 2e-62
 Identities = 126/219 (57%), Positives = 162/219 (73%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKRS+S +D++++G +KRR  GD+RD +I G EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR DT++KIRIGETV G +ERV+ ++S  +ETN FED D  + PAQDALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +R++ +E+  +EDSDG   QVTA+LLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+  DEL+QISGEASVVKKAL Q++SRLHDNPSR
Sbjct: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 8/203 (3%)
 Frame = -3

Query: 596 GGSKRRNPGD-ERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAK 435
           GG K    GD  R  Y    +D        R +CP             I+ Q+R ++ A 
Sbjct: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316

Query: 434 IRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSD 255
           I++  +    D+ +I + S       FED+          L    E +V  +    E  +
Sbjct: 317 IKVDSSSTEGDDCLITVSSKE----FFEDT----------LSATIEAVVRLQPRCSEKIE 362

Query: 254 GDSPQV--TARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELL 81
            DS  +  T RLLVP+                +R  T A +RIL  + LP  A   DE++
Sbjct: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422

Query: 80  QISGEASVVKKALLQVSSRLHDN 12
           QISG+  + K AL+QV +RL  N
Sbjct: 423 QISGDLDLAKDALIQVMTRLRAN 445


>ref|XP_006431188.1| hypothetical protein CICLE_v10011418mg [Citrus clementina]
           gi|557533245|gb|ESR44428.1| hypothetical protein
           CICLE_v10011418mg [Citrus clementina]
          Length = 522

 Score =  244 bits (623), Expect = 2e-62
 Identities = 126/219 (57%), Positives = 162/219 (73%)
 Frame = -3

Query: 659 MAGRRNNNGKRSYSHSDHSENGGSKRRNPGDERDTYIPGHEDTVFRYLCPXXXXXXXXXX 480
           MAG+RN+ GKRS+S +D++++G +KRR  GD+RD +I G EDTV+RYLCP          
Sbjct: 1   MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60

Query: 479 XXXIVKQLRSDTQAKIRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVH 300
              IVKQLR DT++KIRIGETV G +ERV+ ++S  +ETN FED D  + PAQDALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120

Query: 299 ERLVTDEVVAEEDSDGDSPQVTARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKND 120
           +R++ +E+  +EDSDG   QVTA+LLVPSD               IRS+TGAQ+RILK++
Sbjct: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179

Query: 119 RLPACAISGDELLQISGEASVVKKALLQVSSRLHDNPSR 3
            LP+CA+  DEL+QISGEASVVKKAL Q++SRLHDNPSR
Sbjct: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 57/203 (28%), Positives = 84/203 (41%), Gaps = 8/203 (3%)
 Frame = -3

Query: 596 GGSKRRNPGD-ERDTYIPGHEDTV-----FRYLCPXXXXXXXXXXXXXIVKQLRSDTQAK 435
           GG K    GD  R  Y    +D        R +CP             I+ Q+R ++ A 
Sbjct: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316

Query: 434 IRIGETVRGCDERVIAIFSTREETNIFEDSDDKMCPAQDALFKVHERLVTDEVVAEEDSD 255
           I++  +    D+ +I + S       FED+          L    E +V  +    E  +
Sbjct: 317 IKVDSSSTEGDDCLITVSSKE----FFEDT----------LSATIEAVVRLQPRCSEKIE 362

Query: 254 GDSPQV--TARLLVPSDXXXXXXXXXXXXXXXIRSDTGAQVRILKNDRLPACAISGDELL 81
            DS  +  T RLLVP+                +R  T A +RIL  + LP  A   DE++
Sbjct: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422

Query: 80  QISGEASVVKKALLQVSSRLHDN 12
           QISG+  + K AL+QV +RL  N
Sbjct: 423 QISGDLDLAKDALIQVMTRLRAN 445