BLASTX nr result
ID: Zingiber23_contig00030867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00030867
(269 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275012.1| PREDICTED: diaminopimelate decarboxylase 2, ... 75 9e-12
ref|XP_002283716.1| PREDICTED: diaminopimelate decarboxylase 2, ... 75 9e-12
ref|XP_002283712.1| PREDICTED: diaminopimelate decarboxylase 2, ... 75 9e-12
gb|EMJ01006.1| hypothetical protein PRUPE_ppa004857mg [Prunus pe... 72 8e-11
ref|XP_004289634.1| PREDICTED: diaminopimelate decarboxylase 2, ... 71 1e-10
ref|XP_006365126.1| PREDICTED: diaminopimelate decarboxylase 1, ... 71 2e-10
ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, ... 70 4e-10
gb|EOX97955.1| Pyridoxal-dependent decarboxylase family protein ... 67 2e-09
gb|EOX97954.1| Pyridoxal-dependent decarboxylase family protein ... 67 2e-09
gb|EOX97953.1| Pyridoxal-dependent decarboxylase family protein ... 67 2e-09
gb|EXC04415.1| Diaminopimelate decarboxylase 2 [Morus notabilis] 67 2e-09
ref|XP_002313033.1| diaminopimelate decarboxylase family protein... 67 2e-09
ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ric... 67 3e-09
ref|XP_004230896.1| PREDICTED: diaminopimelate decarboxylase 1, ... 66 4e-09
gb|EPS59935.1| diaminopimelate decarboxylase, partial [Genlisea ... 66 6e-09
ref|NP_001241015.1| uncharacterized protein LOC100786832 [Glycin... 65 9e-09
ref|XP_002882877.1| hypothetical protein ARALYDRAFT_478856 [Arab... 64 2e-08
dbj|BAB01044.1| unnamed protein product [Arabidopsis thaliana] 64 2e-08
gb|AGN51314.1| green fluorescent protein-P2A-diaminopimelate dec... 64 2e-08
ref|NP_188056.1| diaminopimelate decarboxylase 1 [Arabidopsis th... 64 2e-08
>ref|XP_002275012.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
[Vitis vinifera]
Length = 564
Score = 75.1 bits (183), Expect = 9e-12
Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
Frame = +2
Query: 2 AAQLFSRSSISPQIPHKPTSAALSLYP--SLRFPAFPRL------KTLALRAVSSQAPRA 157
AA S + + +P PT + YP F FP L KTL L+AV SQ P
Sbjct: 73 AAASSSSMAATNLLPQTPTFSKSLKYPLNPKSFSPFPNLLLRSSPKTLTLKAVLSQNPAK 132
Query: 158 -----AEATEFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
A+A +F+HCF K EDGFLYC+G+RVQDVM VE+ PF
Sbjct: 133 TLTPDAQAKKFQHCFRKSEDGFLYCEGLRVQDVMNQVEKRPF 174
>ref|XP_002283716.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic isoform 2
[Vitis vinifera]
Length = 423
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
Frame = +2
Query: 41 IPHKPTSAALSLYP--SLRFPAFPRL------KTLALRAVSSQAPRA-----AEATEFRH 181
+P PT + YP F FP L KTL L+AV SQ P A+A +F+H
Sbjct: 7 LPQAPTFSKSLKYPLNPKSFSPFPNLLLRPSPKTLTLKAVLSQNPAKTLTPDAQAQKFQH 66
Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
CF K EDGFLYC+G+RVQDVM+ VE+ PF
Sbjct: 67 CFRKSEDGFLYCEGLRVQDVMDQVEKRPF 95
>ref|XP_002283712.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic isoform 1
[Vitis vinifera]
Length = 485
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 13/89 (14%)
Frame = +2
Query: 41 IPHKPTSAALSLYP--SLRFPAFPRL------KTLALRAVSSQAPRA-----AEATEFRH 181
+P PT + YP F FP L KTL L+AV SQ P A+A +F+H
Sbjct: 7 LPQAPTFSKSLKYPLNPKSFSPFPNLLLRPSPKTLTLKAVLSQNPAKTLTPDAQAQKFQH 66
Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
CF K EDGFLYC+G+RVQDVM+ VE+ PF
Sbjct: 67 CFRKSEDGFLYCEGLRVQDVMDQVEKRPF 95
>gb|EMJ01006.1| hypothetical protein PRUPE_ppa004857mg [Prunus persica]
Length = 488
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Frame = +2
Query: 17 SRSSISPQIPHKPTSAALSLYPSLRFPAFPR-LKTLALRAVSSQAPRAA-----EATEFR 178
S SS S + H T S P L P P LK L LRAV SQ P + + T F+
Sbjct: 11 SSSSFSKPLRHSLTRNPFSQNPIL--PLRPASLKPLVLRAVVSQNPSKSLTQDPQTTPFK 68
Query: 179 HCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
HCFSK DGFLYC+G++VQ+V++ VER PF
Sbjct: 69 HCFSKSSDGFLYCEGLKVQEVIDSVERRPF 98
>ref|XP_004289634.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 479
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = +2
Query: 50 KPTSAALSLYPSLR---FPAFPRLKTLALRAVSSQAPRAAEATEFRHCFSKGEDGFLYCD 220
KP + +L P R P P LK L L+AV +Q A + F+HCFSK DGFLYC+
Sbjct: 16 KPLNHSLPRNPFSRNSILPFKPSLKPLLLKAVLTQ--EAPQTVPFKHCFSKSSDGFLYCE 73
Query: 221 GVRVQDVMEGVERSPF 268
G++VQDVME VE+ PF
Sbjct: 74 GLKVQDVMESVEKRPF 89
>ref|XP_006365126.1| PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like
[Solanum tuberosum]
Length = 480
Score = 70.9 bits (172), Expect = 2e-10
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 AAQLFSRSSISPQIPHKPTSAALSLYP-SLRFPAFPRLKTLALRA-VSSQAPRAAEATEF 175
A L S SS + P++A+ LY FP P + L++RA VS+ P + +F
Sbjct: 3 ATHLVSHSSSLHKSLKYPSNASQKLYFFKPNFPLKPISRNLSIRASVSTSEP---QTQKF 59
Query: 176 RHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
+HCF K EDGFLYC+GV+V+DVME VER PF
Sbjct: 60 QHCFKKSEDGFLYCEGVKVEDVMETVERRPF 90
>ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
[Cucumis sativus] gi|449524272|ref|XP_004169147.1|
PREDICTED: diaminopimelate decarboxylase 2,
chloroplastic-like [Cucumis sativus]
Length = 482
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Frame = +2
Query: 2 AAQLFSRS---SISPQIPHKPTSAALSLYPSLRFPAFPRLKT-LALRAVSSQAPRAAEAT 169
A L+S S S+S + H S L P P LK L+L+AV SQ P + T
Sbjct: 3 ATNLYSPSPSPSLSSTLKHSLNSNPFHRIAFL--PHKPFLKAPLSLKAVLSQNPSKTQ-T 59
Query: 170 EFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
+F+HCFSK DGFLYC+G++VQD+ME V++ PF
Sbjct: 60 QFQHCFSKSSDGFLYCEGIKVQDIMESVDKRPF 92
>gb|EOX97955.1| Pyridoxal-dependent decarboxylase family protein isoform 3
[Theobroma cacao]
Length = 411
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +2
Query: 26 SISPQIPHKPTSAALSLYPSLRFPAFP--------RLKTLALRAVSSQAPRAAEATEFRH 181
S SP +P K + L+ P +FP P + +L+++AV SQ P F+H
Sbjct: 9 SHSPSLP-KTLNHPLTQNPFSKFPILPLKPSQNVFKRHSLSIKAVLSQNPAKTLTPTFQH 67
Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
CF+K DGFLYC+ +VQD+ME VE+ PF
Sbjct: 68 CFTKSPDGFLYCEDTKVQDIMEKVEKRPF 96
>gb|EOX97954.1| Pyridoxal-dependent decarboxylase family protein isoform 2
[Theobroma cacao]
Length = 407
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +2
Query: 26 SISPQIPHKPTSAALSLYPSLRFPAFP--------RLKTLALRAVSSQAPRAAEATEFRH 181
S SP +P K + L+ P +FP P + +L+++AV SQ P F+H
Sbjct: 9 SHSPSLP-KTLNHPLTQNPFSKFPILPLKPSQNVFKRHSLSIKAVLSQNPAKTLTPTFQH 67
Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
CF+K DGFLYC+ +VQD+ME VE+ PF
Sbjct: 68 CFTKSPDGFLYCEDTKVQDIMEKVEKRPF 96
>gb|EOX97953.1| Pyridoxal-dependent decarboxylase family protein isoform 1
[Theobroma cacao]
Length = 487
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +2
Query: 26 SISPQIPHKPTSAALSLYPSLRFPAFP--------RLKTLALRAVSSQAPRAAEATEFRH 181
S SP +P K + L+ P +FP P + +L+++AV SQ P F+H
Sbjct: 9 SHSPSLP-KTLNHPLTQNPFSKFPILPLKPSQNVFKRHSLSIKAVLSQNPAKTLTPTFQH 67
Query: 182 CFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
CF+K DGFLYC+ +VQD+ME VE+ PF
Sbjct: 68 CFTKSPDGFLYCEDTKVQDIMEKVEKRPF 96
>gb|EXC04415.1| Diaminopimelate decarboxylase 2 [Morus notabilis]
Length = 530
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 68 LSLYPSLRFPAFPRLKTLALRAVSSQAP-RAAEATEFRHCFSKGEDGFLYCDGVRVQDVM 244
LSL PSL+ LRAV SQ P + ++ T F+HCF+K DGFL+C+G++VQDV+
Sbjct: 33 LSLKPSLK-------PHQTLRAVLSQNPAKTSQTTPFKHCFTKSPDGFLFCEGIKVQDVL 85
Query: 245 EGVERSPF 268
+ VER PF
Sbjct: 86 DSVERRPF 93
>ref|XP_002313033.1| diaminopimelate decarboxylase family protein [Populus trichocarpa]
gi|222849441|gb|EEE86988.1| diaminopimelate
decarboxylase family protein [Populus trichocarpa]
Length = 482
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = +2
Query: 2 AAQLFSRSS-ISPQIPHKPTSAALSLYPSLRFPAFPRLKTLALRAVSSQ---APRAAEAT 169
AA FS S IS + H L P+L F K+ +L+AV SQ A + T
Sbjct: 3 AATNFSHSPFISKTLTHSLNHNPLPKNPTLPFKLS---KSYSLKAVISQQNPATATTQKT 59
Query: 170 EFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
+F+HCF+K +DGFLYC+ ++VQ++ME VE+ PF
Sbjct: 60 QFKHCFTKSQDGFLYCESLKVQEIMESVEKRPF 92
>ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ricinus communis]
gi|223547952|gb|EEF49444.1| diaminopimelate
decarboxylase, putative [Ricinus communis]
Length = 488
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 104 PRLKTLALRAVSSQAPRAAEAT-EFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
P+ +L L+AV SQ P + T +F+HCF+K DGFLYC+ ++VQDVME VE+ PF
Sbjct: 43 PKPLSLTLKAVLSQNPTLTQETAQFKHCFTKSNDGFLYCENLKVQDVMESVEKRPF 98
>ref|XP_004230896.1| PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like
[Solanum lycopersicum]
Length = 480
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Frame = +2
Query: 41 IPHKPTSAALSLYPSL----------RFPAFPRLKTLALRA-VSSQAPRAAEATEFRHCF 187
+ H P+ YPS FP P + L++RA VS+ P + +F+HCF
Sbjct: 7 VSHSPSLHKSLKYPSNASQKLSFFKPNFPLKPISRNLSIRASVSTSEP---QTQKFQHCF 63
Query: 188 SKGEDGFLYCDGVRVQDVMEGVERSPF 268
K EDGFLYC+GV+V+DVME VER PF
Sbjct: 64 KKCEDGFLYCEGVKVEDVMETVERRPF 90
>gb|EPS59935.1| diaminopimelate decarboxylase, partial [Genlisea aurea]
Length = 245
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = +2
Query: 95 PAFPRLKTLALRAVSSQAPRAAEATEFRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
PA LK+ + RAVSS P +FRHCFS+ ++GFLYC+GV+V+DVME E+ PF
Sbjct: 33 PAAQSLKSRSARAVSS--PPETRTQKFRHCFSRSDEGFLYCEGVKVEDVMEVTEKRPF 88
>ref|NP_001241015.1| uncharacterized protein LOC100786832 [Glycine max]
gi|255636652|gb|ACU18663.1| unknown [Glycine max]
Length = 488
Score = 65.1 bits (157), Expect = 9e-09
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Frame = +2
Query: 26 SISPQIP--------HKPTSAALSLYPSLRFPAFPRLKTLALRAVSSQ--APRAAEATE- 172
S SP +P P S L +P L+F + K LRAV SQ A A E T+
Sbjct: 8 SHSPSLPKTYNYSLNQNPLSQNL-FFPPLKFKS--TTKPRVLRAVLSQNAAKTAVEDTKN 64
Query: 173 --FRHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
F+HCF+K EDG+LYC+G++V D+ME VER PF
Sbjct: 65 AHFQHCFTKSEDGYLYCEGLKVHDIMESVERRPF 98
>ref|XP_002882877.1| hypothetical protein ARALYDRAFT_478856 [Arabidopsis lyrata subsp.
lyrata] gi|297328717|gb|EFH59136.1| hypothetical protein
ARALYDRAFT_478856 [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 23 SSISPQIPHKPTSAALSLYP--SLRFPAFPRLKTLALRAVSSQAPRAAEATEFRHCFSKG 196
SS++P TS + P SL+ P LK L+++A + T+F HCF K
Sbjct: 13 SSLNPYQLKNQTSQLSRIIPIFSLKSTLKP-LKRLSVKATAVSQNSTKTLTKFDHCFKKS 71
Query: 197 EDGFLYCDGVRVQDVMEGVERSPF 268
DGFLYC+G +V+D+ME VER PF
Sbjct: 72 SDGFLYCEGTKVEDIMESVERRPF 95
>dbj|BAB01044.1| unnamed protein product [Arabidopsis thaliana]
Length = 526
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 AAQLFSR-SSISPQIPHKPTSAALSLYPSLRFPAFPR-LKTLALRAVSSQAPRAAEATEF 175
A Q S+ SS++P TS P L + + LK L+++A + T+F
Sbjct: 46 ATQFLSQPSSLNPHQLKNQTSQRSRSIPVLSLKSTLKPLKRLSVKAAVVSQNSSKTVTKF 105
Query: 176 RHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
HCF K DGFLYC+G +V+D+ME VER PF
Sbjct: 106 DHCFKKSSDGFLYCEGTKVEDIMESVERRPF 136
>gb|AGN51314.1| green fluorescent protein-P2A-diaminopimelate decarboxylase
[synthetic construct]
Length = 745
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 AAQLFSR-SSISPQIPHKPTSAALSLYPSLRFPAFPR-LKTLALRAVSSQAPRAAEATEF 175
A Q S+ SS++P TS P L + + LK L+++A + T+F
Sbjct: 265 ATQFLSQPSSLNPHQLKNQTSQRSRSIPVLSLKSTLKPLKRLSVKAAVVSQNSSKTVTKF 324
Query: 176 RHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
HCF K DGFLYC+G +V+D+ME VER PF
Sbjct: 325 DHCFKKSSDGFLYCEGTKVEDIMESVERRPF 355
>ref|NP_188056.1| diaminopimelate decarboxylase 1 [Arabidopsis thaliana]
gi|75306310|sp|Q949X7.1|DCDA1_ARATH RecName:
Full=Diaminopimelate decarboxylase 1, chloroplastic;
Short=DAP decarboxylase 1; Short=DAPDC 1; Flags:
Precursor gi|18026845|gb|AAL55653.1|AF227913_1
diaminopimelate decarboxylase [Arabidopsis thaliana]
gi|15292779|gb|AAK92758.1| putative diaminopimelate
decarboxylase [Arabidopsis thaliana]
gi|21594037|gb|AAM65955.1| putative diaminopimelate
decarboxylase [Arabidopsis thaliana]
gi|21689775|gb|AAM67531.1| putative diaminopimelate
decarboxylase [Arabidopsis thaliana]
gi|332641990|gb|AEE75511.1| diaminopimelate
decarboxylase 1 [Arabidopsis thaliana]
Length = 484
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 AAQLFSR-SSISPQIPHKPTSAALSLYPSLRFPAFPR-LKTLALRAVSSQAPRAAEATEF 175
A Q S+ SS++P TS P L + + LK L+++A + T+F
Sbjct: 4 ATQFLSQPSSLNPHQLKNQTSQRSRSIPVLSLKSTLKPLKRLSVKAAVVSQNSSKTVTKF 63
Query: 176 RHCFSKGEDGFLYCDGVRVQDVMEGVERSPF 268
HCF K DGFLYC+G +V+D+ME VER PF
Sbjct: 64 DHCFKKSSDGFLYCEGTKVEDIMESVERRPF 94