BLASTX nr result
ID: Zingiber23_contig00030136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00030136
(282 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|EMT15401.1| hypothetical protein F775_20334 [Aegilops tauschii] 90 4e-16
ref|XP_006827308.1| hypothetical protein AMTR_s00010p00266240 [A... 89 8e-16
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
emb|CBI22243.3| unnamed protein product [Vitis vinifera] 87 2e-15
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S... 87 2e-15
gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japo... 86 5e-15
gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indi... 86 5e-15
gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonic... 86 5e-15
gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat cont... 86 5e-15
dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protei... 84 3e-14
ref|XP_004966840.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
gb|EMT08625.1| hypothetical protein F775_14245 [Aegilops tauschii] 82 6e-14
gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays] 82 7e-14
ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea ma... 82 7e-14
ref|XP_006338776.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus pe... 80 2e-13
ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
>ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/92 (50%), Positives = 55/92 (59%)
Frame = +3
Query: 6 RMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASCG 185
R+ A + PD +TF +LL G Q H KLG+ DAFVRN+LIN HA CG
Sbjct: 87 RIEAARLKPDSFTFCYLLRACAGLPGSCAGYQVHGAVVKLGYFKDAFVRNALINMHAKCG 146
Query: 186 DLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
DL VA L D RDVVAR+AVI GHA +G+
Sbjct: 147 DLLVAGTLLDEAGERDVVARSAVIAGHAAKGE 178
>gb|EMT15401.1| hypothetical protein F775_20334 [Aegilops tauschii]
Length = 514
Score = 89.7 bits (221), Expect = 4e-16
Identities = 48/92 (52%), Positives = 56/92 (60%)
Frame = +3
Query: 6 RMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASCG 185
R+ A + PD +TF +LL G Q H V KLGF SDAFVRN+LIN HA CG
Sbjct: 88 RIGAAGLRPDAFTFCYLLRASAGLSGSCAGCQVHGVVVKLGFLSDAFVRNALINMHAKCG 147
Query: 186 DLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
DL +A AL D DVVA +AVI G+A RGD
Sbjct: 148 DLQLAGALLDEAGEGDVVAWSAVIAGNAARGD 179
>ref|XP_006827308.1| hypothetical protein AMTR_s00010p00266240 [Amborella trichopoda]
gi|548831737|gb|ERM94545.1| hypothetical protein
AMTR_s00010p00266240 [Amborella trichopoda]
Length = 247
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
++M ++ PD +TF FLL G QFH +KLGF+SD FVRN+LI+ HA+C
Sbjct: 67 TQMESTHIRPDKFTFPFLLKACSRLSSAFMGNQFHTQISKLGFESDMFVRNTLIHLHATC 126
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRG 278
G L VA LFD +RDVVA +A++ GH+ RG
Sbjct: 127 GSLEVAEKLFDESGKRDVVAWSALLAGHSRRG 158
>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Fragaria vesca subsp. vesca]
Length = 540
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/92 (48%), Positives = 58/92 (63%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
+RM + + PD +TF F+L G H + GF+S+A VRN+LI+FHA C
Sbjct: 102 TRMEKRGLRPDDFTFPFVLKACNKLCWVRMGMGIHGKVVRFGFESNASVRNTLIDFHAKC 161
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRG 278
GDL VA ALFDG ARRDVVA +A+ G+A RG
Sbjct: 162 GDLRVATALFDGSARRDVVAWSALTAGYARRG 193
>ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/86 (55%), Positives = 54/86 (62%)
Frame = +3
Query: 24 VSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASCGDLTVAM 203
V PD TF F+L GAQ HA K G +SDAFVRN+LI HASCG+L VA
Sbjct: 108 VRPDKITFPFVLRACTAMGAGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVAS 167
Query: 204 ALFDGPARRDVVARTAVIRGHATRGD 281
ALFDG AR D VA +A+I G A RGD
Sbjct: 168 ALFDGRAREDAVAWSAMITGCARRGD 193
>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/93 (49%), Positives = 59/93 (63%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
S+M V PD +TF F+L G H +LGF+S+ FVRN+LI FHA+C
Sbjct: 67 SQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANC 126
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
GDL VA ALFDG A+RDVVA +A+ G+A RG+
Sbjct: 127 GDLAVARALFDGSAKRDVVAWSALTAGYARRGE 159
>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/93 (49%), Positives = 59/93 (63%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
S+M V PD +TF F+L G H +LGF+S+ FVRN+LI FHA+C
Sbjct: 102 SQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANC 161
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
GDL VA ALFDG A+RDVVA +A+ G+A RG+
Sbjct: 162 GDLAVARALFDGSAKRDVVAWSALTAGYARRGE 194
>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein
SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +3
Query: 24 VSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASCGDLTVAM 203
V PD TF F+L GAQ HA K G +SDAFVRN+LI HA+CGDL A
Sbjct: 110 VRPDKRTFPFVLRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAA 169
Query: 204 ALFDGPARRDVVARTAVIRGHATRGD 281
ALFDG AR D VA +A+I G A RGD
Sbjct: 170 ALFDGEAREDAVAWSAMISGFARRGD 195
>gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = +3
Query: 3 SRMLR----ANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINF 170
+RMLR V PD TF F+L G Q HA K G +SDAFV+N+LI
Sbjct: 67 TRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGM 126
Query: 171 HASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
HASCG+L +A ALFDG AR D VA +A+I G A RGD
Sbjct: 127 HASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGD 163
>gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = +3
Query: 3 SRMLR----ANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINF 170
+RMLR V PD TF F+L G Q HA K G +SDAFV+N+LI
Sbjct: 67 TRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGM 126
Query: 171 HASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
HASCG+L +A ALFDG AR D VA +A+I G A RGD
Sbjct: 127 HASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGD 163
>gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = +3
Query: 3 SRMLR----ANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINF 170
+RMLR V PD TF F+L G Q HA K G +SDAFV+N+LI
Sbjct: 67 TRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGM 126
Query: 171 HASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
HASCG+L +A ALFDG AR D VA +A+I G A RGD
Sbjct: 127 HASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGD 163
>gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = +3
Query: 3 SRMLR----ANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINF 170
+RMLR V PD TF F+L G Q HA K G +SDAFV+N+LI
Sbjct: 97 TRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGM 156
Query: 171 HASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
HASCG+L +A ALFDG AR D VA +A+I G A RGD
Sbjct: 157 HASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGD 193
>dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|125596587|gb|EAZ36367.1|
hypothetical protein OsJ_20695 [Oryza sativa Japonica
Group] gi|218197849|gb|EEC80276.1| hypothetical protein
OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 83.6 bits (205), Expect = 3e-14
Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +3
Query: 6 RMLRAN-VSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
RM A+ + PD +TF +LL G Q H KLGF DA+VRN+LIN A C
Sbjct: 89 RMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQVHGAVVKLGFLKDAYVRNALINMFAKC 148
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
GDL VA L D DVVA +AVI GHA RGD
Sbjct: 149 GDLRVASVLLDEAGEGDVVAWSAVIAGHAARGD 181
>ref|XP_004966840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Setaria italica]
Length = 519
Score = 82.4 bits (202), Expect = 6e-14
Identities = 47/97 (48%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGA----QFHAVCTKLGFDSDAFVRNSLINF 170
SRM + PD +TF +LL G+ Q HAV KLGF DAFVRN+LIN
Sbjct: 90 SRMEAVGLRPDGFTFCYLLRACCAGIGMPVGSSAGWQVHAVVVKLGFLEDAFVRNALINM 149
Query: 171 HASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
HA CGDL VA L + RD+VA +AVI G+A RG+
Sbjct: 150 HAKCGDLGVAGTLLGEASERDIVAWSAVIAGNAARGN 186
>gb|EMT08625.1| hypothetical protein F775_14245 [Aegilops tauschii]
Length = 581
Score = 82.4 bits (202), Expect = 6e-14
Identities = 46/86 (53%), Positives = 53/86 (61%)
Frame = +3
Query: 24 VSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASCGDLTVAM 203
V PD TF F+L GAQ HA K G +SDAFV+N+LI HASCG+L VA
Sbjct: 141 VRPDKITFPFVLRACTAMGAGGTGAQVHAHVVKAGLESDAFVKNALIGMHASCGELGVAG 200
Query: 204 ALFDGPARRDVVARTAVIRGHATRGD 281
ALFD AR D VA +A+I G A RGD
Sbjct: 201 ALFDLRAREDAVAWSAMISGCARRGD 226
>gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/84 (53%), Positives = 51/84 (60%)
Frame = +3
Query: 30 PDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASCGDLTVAMAL 209
PD TF F+L GAQ HA K G +SDAFVRN+LI HA+ GDL A AL
Sbjct: 113 PDKRTFPFVLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAAL 172
Query: 210 FDGPARRDVVARTAVIRGHATRGD 281
FDG AR D VA +A+I G A RGD
Sbjct: 173 FDGEAREDAVAWSAMISGFARRGD 196
>ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/84 (53%), Positives = 51/84 (60%)
Frame = +3
Query: 30 PDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASCGDLTVAMAL 209
PD TF F+L GAQ HA K G +SDAFVRN+LI HA+ GDL A AL
Sbjct: 113 PDKRTFPFVLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAAL 172
Query: 210 FDGPARRDVVARTAVIRGHATRGD 281
FDG AR D VA +A+I G A RGD
Sbjct: 173 FDGEAREDAVAWSAMISGFARRGD 196
>ref|XP_006338776.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Solanum tuberosum]
Length = 539
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
++M + ++ PD YTF FLL G H K GF+S+ F RN+LI FHA+
Sbjct: 102 TQMEKRSILPDSYTFPFLLKACTKLSWLVSGLTVHGKIVKHGFESNKFARNTLIYFHANV 161
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
GD+ +A LFDG A+RDVVA +A+ G+A RG+
Sbjct: 162 GDIRIAGQLFDGSAKRDVVAWSALTAGYARRGE 194
>gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus persica]
Length = 539
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/92 (43%), Positives = 54/92 (58%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
+RM + PD +TF F+L G H + GF+S+ FVRN+LI FHA+C
Sbjct: 102 TRMENRHAMPDSFTFPFILKACTKLSWVKMGMGIHGKVVRFGFESNTFVRNTLIYFHANC 161
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRG 278
GDL +A LFD A+RDVV +A+ G+A RG
Sbjct: 162 GDLKIASELFDASAKRDVVPWSALTAGYARRG 193
>ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cicer arietinum]
Length = 521
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = +3
Query: 3 SRMLRANVSPDVYTFLFLLXXXXXXXXXXXGAQFHAVCTKLGFDSDAFVRNSLINFHASC 182
++M ++ PD YTF F+L G+ H + + GF S+ FVRN+L+ FHA C
Sbjct: 98 AQMHYRSLKPDSYTFPFVLKACTKLIWVNTGSAVHGLAVRFGFCSNTFVRNALLVFHAKC 157
Query: 183 GDLTVAMALFDGPARRDVVARTAVIRGHATRGD 281
GDL VA ++FD + DVVA +++I G+A RGD
Sbjct: 158 GDLKVATSIFDDSCKGDVVAWSSLIAGYAKRGD 190