BLASTX nr result
ID: Zingiber23_contig00030091
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00030091
(994 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 390 e-106
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 390 e-106
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E sub... 388 e-105
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 386 e-105
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 386 e-105
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 386 e-105
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi... 386 e-105
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 385 e-104
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 385 e-104
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 382 e-104
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 380 e-103
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 379 e-102
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 379 e-102
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 378 e-102
gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Ae... 377 e-102
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 377 e-102
ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit fa... 376 e-102
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 375 e-101
ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E sub... 375 e-101
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 375 e-101
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 390 bits (1001), Expect = e-106
Identities = 192/326 (58%), Positives = 256/326 (78%), Gaps = 1/326 (0%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S FLKFD RD + SL+ +I TSI+ KGP++VL FF+ +QPLLME +F EGFSV L D+
Sbjct: 565 SNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 624
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
A ++ ++++IQ +L QLRS +NELV LQ E +L+S+K P +F+ K S+LG L
Sbjct: 625 SMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKL 684
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
D+K++SAI KVV+QIGFLGLQL D+G++YSK+L++D + F N++ ++D PS +GL
Sbjct: 685 FDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGL 744
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
VK FFHGL P+E +VH+ISTRE++VRSSRGLTEPGTLFKNLMAILRDV+ICYDGT+RNV
Sbjct: 745 VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 804
Query: 270 CTGSIVQIKY-LDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
C+ SI+Q++Y + ++ + PGEPVGVLAATA+S PAYKAVLDS+ S+NSSW++MK
Sbjct: 805 CSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 864
Query: 93 EILLCKTGYKNDVSDRRVILYLNDCS 16
EILLCK +KN+ DRRVILYLN+C+
Sbjct: 865 EILLCKVSFKNEPIDRRVILYLNNCA 890
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 390 bits (1001), Expect = e-106
Identities = 192/326 (58%), Positives = 256/326 (78%), Gaps = 1/326 (0%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S FLKFD RD + SL+ +I TSI+ KGP++VL FF+ +QPLLME +F EGFSV L D+
Sbjct: 595 SNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 654
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
A ++ ++++IQ +L QLRS +NELV LQ E +L+S+K P +F+ K S+LG L
Sbjct: 655 SMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKL 714
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
D+K++SAI KVV+QIGFLGLQL D+G++YSK+L++D + F N++ ++D PS +GL
Sbjct: 715 FDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGL 774
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
VK FFHGL P+E +VH+ISTRE++VRSSRGLTEPGTLFKNLMAILRDV+ICYDGT+RNV
Sbjct: 775 VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 834
Query: 270 CTGSIVQIKY-LDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
C+ SI+Q++Y + ++ + PGEPVGVLAATA+S PAYKAVLDS+ S+NSSW++MK
Sbjct: 835 CSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 894
Query: 93 EILLCKTGYKNDVSDRRVILYLNDCS 16
EILLCK +KN+ DRRVILYLN+C+
Sbjct: 895 EILLCKVSFKNEPIDRRVILYLNNCA 920
>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Setaria
italica]
Length = 2038
Score = 388 bits (997), Expect = e-105
Identities = 191/322 (59%), Positives = 244/322 (75%)
Frame = -2
Query: 981 LKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDFYFQ 802
+K D +D VQ D+ +S+ KGP + L F N +QPLLME L ++GFSV+LKDF
Sbjct: 572 IKLDLDKDHVQDSFNDLVSSVLSEKGPGEALQFLNVLQPLLMEFLLLDGFSVTLKDFNVP 631
Query: 801 TAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSLIDA 622
AI+EE+ ++IQK IL Q R +++ ++ E LK +K I++F+ K S LG LID
Sbjct: 632 KAILEEVHKNIQKQSLILEQSRFSKSQIAEMRVENNLKGVKQQISEFVIKCSDLGLLIDP 691
Query: 621 KNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGLVKS 442
K ++++ KVV+Q+GF+GLQL+ +GK YS LV+DCF+ F+NKH + P EAYGLV+S
Sbjct: 692 KKEASMSKVVQQLGFVGLQLYHEGKLYSSRLVEDCFSNFVNKHSDIGDEHPPEAYGLVQS 751
Query: 441 SFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNVCTG 262
S+FHGL P+E LVH+ISTRE IVRSSRGLTEPGTLFKNLMAILRDV+ICYDGT+RN C+
Sbjct: 752 SYFHGLNPYEELVHSISTREAIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNTCSN 811
Query: 261 SIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKEILL 82
SI+Q+KY +D+ D + PGEPVGVLAATAIS PAY+AVLDSSQSNN+SWE MKEIL
Sbjct: 812 SIIQLKYKEDDETDFPSALPPGEPVGVLAATAISTPAYRAVLDSSQSNNASWESMKEILQ 871
Query: 81 CKTGYKNDVSDRRVILYLNDCS 16
K GYKND+ DR+VIL+LNDCS
Sbjct: 872 TKVGYKNDMKDRKVILFLNDCS 893
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 386 bits (991), Expect = e-105
Identities = 197/326 (60%), Positives = 252/326 (77%), Gaps = 1/326 (0%)
Frame = -2
Query: 993 QSEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKD 814
+S+ L D SRD++QS++ ++ TSI+ KGPK+VLNFF+ +QPLLME +F EGFSVSL+D
Sbjct: 565 KSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLED 624
Query: 813 FYFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGS 634
F +I+ I++ IQ +L QLRS YNELV LQ E +++ K+P+A+F+ SALG
Sbjct: 625 FSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSALGD 684
Query: 633 LIDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYG 454
LID+K+DS + KVV+QIGFLGLQL ++GK+YSK LV+D F + + +D PS +G
Sbjct: 685 LIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAEFG 744
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
L+KS FFHGL P+EG+VH+ISTRE+IVRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 745 LIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRN 804
Query: 273 VCTGSIVQIKY-LDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELM 97
+ + SI+Q +Y L+ GEPVGVLAATA+SNPAYKAVLDS+ S+NSSWELM
Sbjct: 805 ISSNSIIQFQYGLNARTKPQFPA---GEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELM 861
Query: 96 KEILLCKTGYKNDVSDRRVILYLNDC 19
KEILLCK KND+ DRRVILYL DC
Sbjct: 862 KEILLCKVSLKNDLVDRRVILYLKDC 887
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 386 bits (991), Expect = e-105
Identities = 197/326 (60%), Positives = 252/326 (77%), Gaps = 1/326 (0%)
Frame = -2
Query: 993 QSEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKD 814
+S+ L D SRD++QS++ ++ TSI+ KGPK+VLNFF+ +QPLLME +F EGFSVSL+D
Sbjct: 565 KSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLED 624
Query: 813 FYFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGS 634
F +I+ I++ IQ +L QLRS YNELV LQ E +++ K+P+A+F+ SALG
Sbjct: 625 FSVSREVIQNIQKDIQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSALGD 684
Query: 633 LIDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYG 454
LID+K+DS + KVV+QIGFLGLQL ++GK+YSK LV+D F + + +D PS +G
Sbjct: 685 LIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAEFG 744
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
L+KS FFHGL P+EG+VH+ISTRE+IVRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 745 LIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRN 804
Query: 273 VCTGSIVQIKY-LDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELM 97
+ + SI+Q +Y L+ GEPVGVLAATA+SNPAYKAVLDS+ S+NSSWELM
Sbjct: 805 ISSNSIIQFQYGLNARTKPQFPA---GEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELM 861
Query: 96 KEILLCKTGYKNDVSDRRVILYLNDC 19
KEILLCK KND+ DRRVILYL DC
Sbjct: 862 KEILLCKVSLKNDLVDRRVILYLKDC 887
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 386 bits (991), Expect = e-105
Identities = 190/329 (57%), Positives = 251/329 (76%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S +K D ++ VQ+ +D+ S KGP + L F N +QPLLME++ ++GFSVSL+DF
Sbjct: 568 STIIKLDLDKESVQTSFSDLVYSTLSVKGPGEALQFLNVLQPLLMELILLDGFSVSLQDF 627
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
++EE +++I+K IL Q R N++V ++ + LK +K I+DF+ K S LG L
Sbjct: 628 NVPKVLLEEAQKNIEKQSLILEQSRFAENQVVEMRVDNNLKDIKQQISDFVVKRSHLGLL 687
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID K+DS++ KVV+Q+GF+GLQL+ +GK+YS+ LV+DC+ TF+NKH + EAYGL
Sbjct: 688 IDPKSDSSVSKVVQQLGFVGLQLYREGKFYSRRLVEDCYYTFVNKHPAVREEHSPEAYGL 747
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
V+SS+FHGL P+E LVHAISTRE IVRSSRGLTEPGTLFKNLMA+LRDV+ICYDGT+RNV
Sbjct: 748 VRSSYFHGLNPYEELVHAISTREAIVRSSRGLTEPGTLFKNLMALLRDVVICYDGTVRNV 807
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
C+ SI+Q+ Y +D+ +D + PGEPVGVLAATAISNPAYKAVLD+SQSNN+SWE MKE
Sbjct: 808 CSKSIIQLNYTEDDALDFPSAIGPGEPVGVLAATAISNPAYKAVLDASQSNNTSWERMKE 867
Query: 90 ILLCKTGYKNDVSDRRVILYLNDCSQSYK 4
IL + YKND+ DR+VIL+LNDCS + K
Sbjct: 868 ILQTTSRYKNDMKDRKVILFLNDCSCAKK 896
>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
Length = 1867
Score = 386 bits (991), Expect = e-105
Identities = 190/329 (57%), Positives = 251/329 (76%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S +K D ++ VQ+ +D+ S KGP + L F N +QPLLME++ ++GFSVSL+DF
Sbjct: 568 STIIKLDLDKESVQTSFSDLVYSTLSVKGPGEALQFLNVLQPLLMELILLDGFSVSLQDF 627
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
++EE +++I+K IL Q R N++V ++ + LK +K I+DF+ K S LG L
Sbjct: 628 NVPKVLLEEAQKNIEKQSLILEQSRFAENQVVEMRVDNNLKDIKQQISDFVVKRSHLGLL 687
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID K+DS++ KVV+Q+GF+GLQL+ +GK+YS+ LV+DC+ TF+NKH + EAYGL
Sbjct: 688 IDPKSDSSVSKVVQQLGFVGLQLYREGKFYSRRLVEDCYYTFVNKHPAVREEHSPEAYGL 747
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
V+SS+FHGL P+E LVHAISTRE IVRSSRGLTEPGTLFKNLMA+LRDV+ICYDGT+RNV
Sbjct: 748 VRSSYFHGLNPYEELVHAISTREAIVRSSRGLTEPGTLFKNLMALLRDVVICYDGTVRNV 807
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
C+ SI+Q+ Y +D+ +D + PGEPVGVLAATAISNPAYKAVLD+SQSNN+SWE MKE
Sbjct: 808 CSKSIIQLNYTEDDALDFPSAIGPGEPVGVLAATAISNPAYKAVLDASQSNNTSWERMKE 867
Query: 90 ILLCKTGYKNDVSDRRVILYLNDCSQSYK 4
IL + YKND+ DR+VIL+LNDCS + K
Sbjct: 868 ILQTTSRYKNDMKDRKVILFLNDCSCAKK 896
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 385 bits (990), Expect = e-104
Identities = 196/325 (60%), Positives = 250/325 (76%)
Frame = -2
Query: 993 QSEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKD 814
+S LK D +RD++QSL+ +I TSI+ KGP +VL FF+ +QPLLME LF EGFSVSL+D
Sbjct: 624 KSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLED 683
Query: 813 FYFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGS 634
F + + + I+++++ +L LRS YNEL+ LQ E +L+ K P+A+F+ SALG+
Sbjct: 684 FSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGN 743
Query: 633 LIDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYG 454
LID+K+DSAI KVV+QIGFLG QL ++GK+YS+ LV+ F +K+ F D PS +G
Sbjct: 744 LIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFG 803
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
L++S FFHGL P+E +VH+ISTREIIVRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 804 LIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRN 863
Query: 273 VCTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
VC+ SI+Q +Y GEPVGVLAATA+SNPAYKAVLDSS S+NSSWELMK
Sbjct: 864 VCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMK 923
Query: 93 EILLCKTGYKNDVSDRRVILYLNDC 19
EILLC+ +KND+ DRRVILYLNDC
Sbjct: 924 EILLCQVNFKNDLIDRRVILYLNDC 948
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 385 bits (990), Expect = e-104
Identities = 196/325 (60%), Positives = 250/325 (76%)
Frame = -2
Query: 993 QSEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKD 814
+S LK D +RD++QSL+ +I TSI+ KGP +VL FF+ +QPLLME LF EGFSVSL+D
Sbjct: 564 KSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLED 623
Query: 813 FYFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGS 634
F + + + I+++++ +L LRS YNEL+ LQ E +L+ K P+A+F+ SALG+
Sbjct: 624 FSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGN 683
Query: 633 LIDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYG 454
LID+K+DSAI KVV+QIGFLG QL ++GK+YS+ LV+ F +K+ F D PS +G
Sbjct: 684 LIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFG 743
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
L++S FFHGL P+E +VH+ISTREIIVRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 744 LIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRN 803
Query: 273 VCTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
VC+ SI+Q +Y GEPVGVLAATA+SNPAYKAVLDSS S+NSSWELMK
Sbjct: 804 VCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMK 863
Query: 93 EILLCKTGYKNDVSDRRVILYLNDC 19
EILLC+ +KND+ DRRVILYLNDC
Sbjct: 864 EILLCQVNFKNDLIDRRVILYLNDC 888
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza
brachyantha]
Length = 1993
Score = 382 bits (982), Expect = e-104
Identities = 188/329 (57%), Positives = 249/329 (75%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S +K D ++ VQ+ +D+ S KGP + L F N +QPLLME++ ++GFSVSL+DF
Sbjct: 568 STIIKLDLDKESVQTSFSDLLYSTLSVKGPGEALQFLNVLQPLLMELILLDGFSVSLQDF 627
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
++E +++I+K IL Q R N+ V ++ + LK +K I+DF+ K S LG L
Sbjct: 628 NVPKVHLQEAQKNIEKQSIILEQSRCAENQFVEMRVDNNLKDIKQQISDFVVKRSHLGLL 687
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID K+D ++ KVV+Q+GF+GLQL+ +GK+YS+ LV+DCF+ F+NKH + EAYGL
Sbjct: 688 IDPKSDPSVSKVVQQLGFVGLQLYREGKFYSRRLVEDCFSNFVNKHPAVRKEHSPEAYGL 747
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
V+SS+FHGL P+E LVHAISTRE IVRSSRGLTEPGTLFKNLMA+LRDV+ICYDGT+RNV
Sbjct: 748 VRSSYFHGLNPYEELVHAISTREAIVRSSRGLTEPGTLFKNLMALLRDVVICYDGTVRNV 807
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
C+ SI+Q+KY +++ +D + +PGEPVGVLAATAISNPAYKAVLD+SQSNN+SWE MKE
Sbjct: 808 CSKSIIQLKYKEEDALDFPSAIAPGEPVGVLAATAISNPAYKAVLDASQSNNTSWERMKE 867
Query: 90 ILLCKTGYKNDVSDRRVILYLNDCSQSYK 4
IL T YKND DR++IL+LNDCS + K
Sbjct: 868 ILQTTTRYKNDTKDRKIILFLNDCSCAKK 896
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 380 bits (976), Expect = e-103
Identities = 187/324 (57%), Positives = 255/324 (78%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
SE LK D +RDIV S+++D+ TS++ +K PKD L+FF+ +QPLLME LF EGFSVSL DF
Sbjct: 366 SEILKLDFNRDIVASVISDVLTSLFFNKSPKDALDFFDSLQPLLMENLFSEGFSVSLHDF 425
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
+F + ++ I+R+IQ +L QLRS +NELV +QFE +++ KSP+ +F+ SALGS+
Sbjct: 426 FFPKSELQNIQRNIQDLSPLLLQLRSSFNELVQVQFENHIREFKSPVGNFILISSALGSM 485
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID+++DSAI K+V+QIGFLGLQL D+ K+YS+ LV+D + F K+ F+++ PSE +G
Sbjct: 486 IDSRSDSAIDKIVQQIGFLGLQLSDRRKFYSRGLVEDVASLFHQKYPFADV-YPSEEFGF 544
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
V FFHGL P+E +VH+I+TRE+IVRSS+GL EPGTLFKNLMA+LRDV+ICYDGT+RN+
Sbjct: 545 VSRCFFHGLDPYEEIVHSIATREVIVRSSKGLAEPGTLFKNLMAVLRDVVICYDGTVRNI 604
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
+ S++Q +Y + S G+PVGVLAATA+SNPAYKAVLDSS ++NSSW++MKE
Sbjct: 605 SSNSVIQFEY-GVGGMQSQNLFPAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKE 663
Query: 90 ILLCKTGYKNDVSDRRVILYLNDC 19
IL C+ ++ND++DRRVILYLNDC
Sbjct: 664 ILFCRANFRNDINDRRVILYLNDC 687
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 379 bits (973), Expect = e-102
Identities = 188/324 (58%), Positives = 247/324 (76%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
++ +K D SRD+VQ+++ DI S++ KGP V FFN +QPLLME LF EGFSV L+DF
Sbjct: 568 TDIVKVDFSRDVVQAVINDIVISMFFEKGPDAVFKFFNSLQPLLMESLFSEGFSVGLEDF 627
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
Y A I RR + +L QLRS YNEL+ LQ E +++ K P+ADF+ + S++G L
Sbjct: 628 YISRAAIGGTRRDFKVISSLLSQLRSTYNELMALQLENHIRRAKLPVADFIVRLSSIGDL 687
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID K+DSA+ KVV+QIGFLGLQ+ D+GK+Y+K LV+D F +K + S++D PS +GL
Sbjct: 688 IDYKSDSAMTKVVQQIGFLGLQISDRGKFYTKTLVEDMALHFESK-YPSDIDYPSAKHGL 746
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
++S FFHGL P+E +VH+IS RE++VRS+RGL+EPGTLFKNLMAILRDV+ICYDGT+RNV
Sbjct: 747 IQSCFFHGLDPYEEMVHSISAREVMVRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNV 806
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
C+ SI+Q +Y + + + GEPVGVLAATA+SNPAYKAVLDS+ S+NSSWELMKE
Sbjct: 807 CSNSIIQFEYGMKAGIKAQSLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKE 866
Query: 90 ILLCKTGYKNDVSDRRVILYLNDC 19
IL C+ +KND++DRRVILY N C
Sbjct: 867 ILQCRVNFKNDITDRRVILYFNYC 890
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 379 bits (972), Expect = e-102
Identities = 191/325 (58%), Positives = 249/325 (76%)
Frame = -2
Query: 993 QSEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKD 814
+SE L D S V +++ DI TS++ KG +DVL FF+ +QPLLME LF EGFSV L+D
Sbjct: 567 KSEILNIDFSTSSVAAVMNDIATSVFFEKGGEDVLKFFDSLQPLLMENLFSEGFSVGLED 626
Query: 813 FYFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGS 634
FY I++I+++IQ + +L LRS YNE V Q + ++S+K P++ F+ + SALG
Sbjct: 627 FYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFVEFQLQNRIRSVKVPVSHFILESSALGD 686
Query: 633 LIDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYG 454
LID+K+DSAI K+V+QIGFLGLQL D+G++YSK LV+D + + + S++D PS YG
Sbjct: 687 LIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSKTLVED-VASLCHSKYPSDIDYPSAEYG 745
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
LV+S FFHGL P+E +VH+I+TRE+IVRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 746 LVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRN 805
Query: 273 VCTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
VC+ SI+Q +Y + GEPVGVLAATA+SNPAYKAVLDS+ S+NSSWELMK
Sbjct: 806 VCSNSIIQFEYGVNIGSRPQHLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMK 865
Query: 93 EILLCKTGYKNDVSDRRVILYLNDC 19
EILLCK +KN++ DRRVILYLN+C
Sbjct: 866 EILLCKVNFKNELIDRRVILYLNNC 890
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 378 bits (970), Expect = e-102
Identities = 195/325 (60%), Positives = 246/325 (75%)
Frame = -2
Query: 993 QSEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKD 814
QSE L+F+ SRD++ + + +I S++ KGPK+ LNFF+ +QP LME LF EGFSVSL++
Sbjct: 568 QSEILEFEFSRDVLPATVNEIAASVFFGKGPKEALNFFDVLQPFLMESLFAEGFSVSLEE 627
Query: 813 FYFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGS 634
F AI IR+SI K +L QLRS YNELV Q EK+++ ++ PI +F K + LG
Sbjct: 628 FSISRAIKRIIRKSIGKVSSLLYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTKLGD 687
Query: 633 LIDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYG 454
LID+K+ SAI KVV+QIGFLG QLFD+G++YSK LVDD + F K + PS YG
Sbjct: 688 LIDSKSKSAIDKVVQQIGFLGQQLFDRGRFYSKGLVDDVASHFHAKCCYDGDGYPSAEYG 747
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
L+K FF+GL P+E +VH+ISTREI+VRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 748 LLKGCFFNGLDPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRN 807
Query: 273 VCTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
+C+ SI+Q +Y S GEPVGVLAATA+SNPAYKAVLD+S S+NSSWELMK
Sbjct: 808 ICSNSIIQFEYGIQAGDKSEHLFPAGEPVGVLAATAMSNPAYKAVLDASPSSNSSWELMK 867
Query: 93 EILLCKTGYKNDVSDRRVILYLNDC 19
EILLCK ++N++ DRRVILYLNDC
Sbjct: 868 EILLCKVNFRNELVDRRVILYLNDC 892
>gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Aegilops tauschii]
Length = 2017
Score = 377 bits (969), Expect = e-102
Identities = 189/327 (57%), Positives = 246/327 (75%), Gaps = 2/327 (0%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S +K D ++ VQ+ +D+ +SI KGP D L F N +QPLLME L ++GFSVSL+DF
Sbjct: 663 STVIKLDIDKESVQASFSDLVSSILAVKGPGDALKFLNALQPLLMEFLLLDGFSVSLQDF 722
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
++EE + I+K +L Q R ++ V + + LK +K IADF+ K S LG L
Sbjct: 723 SVPKPLLEEAQECIKKQSLVLEQSRCSSSQSVETRVDNNLKDVKQQIADFVVKSSRLGLL 782
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSE--LDCPSEAY 457
ID K+DS++ KVV+Q+ F+G QL+ +GK+YS+ LVDDCF++F+N+H E + P EAY
Sbjct: 783 IDPKSDSSVSKVVQQLAFVGPQLYREGKFYSRRLVDDCFSSFVNRHPPIEDGVQHPPEAY 842
Query: 456 GLVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIR 277
GLV+S++FHGL P+E LVH+I TRE IVRSSRGLTEPGTLFK+LMAILRDV+ICYDGT+R
Sbjct: 843 GLVQSAYFHGLNPYEELVHSICTRETIVRSSRGLTEPGTLFKSLMAILRDVVICYDGTVR 902
Query: 276 NVCTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELM 97
N+C+ SI+Q+KY +++ D + +PGEPVGVLAATAISNPAYK VLDSSQSNN+SWELM
Sbjct: 903 NICSNSIMQLKYKEEDDTDFPSAIAPGEPVGVLAATAISNPAYKTVLDSSQSNNTSWELM 962
Query: 96 KEILLCKTGYKNDVSDRRVILYLNDCS 16
KEIL K YKND DR+VIL+LNDCS
Sbjct: 963 KEILKTKVSYKNDAKDRKVILFLNDCS 989
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 377 bits (967), Expect = e-102
Identities = 193/325 (59%), Positives = 245/325 (75%)
Frame = -2
Query: 993 QSEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKD 814
+S+FL D RD++ S+L D+ TSIY KGP DVL FFN +QPLLME L EGFS+SL+D
Sbjct: 565 KSQFLGIDYHRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRD 624
Query: 813 FYFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGS 634
FY A+ + I+ IQ +L LRS YNE V +Q E +L++ K P+ DF+ K S +G
Sbjct: 625 FYMTKAVRDGIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGV 684
Query: 633 LIDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYG 454
LID+K++SA KVV+QIGFLGLQ+ D+GK+Y+K LV D F K + S PSE +G
Sbjct: 685 LIDSKSESAFNKVVQQIGFLGLQISDRGKFYTKTLVHDMAQLFQKK-YPSVGTNPSEEFG 743
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
LV+S F+GL P++G++H+IS+RE+IVRS+RGLTEPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 744 LVRSCLFYGLDPYQGMIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRN 803
Query: 273 VCTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
V + SI+Q +Y + + G+PVGVLAATA+SNPAYKAVLDSS S+NSSWE+MK
Sbjct: 804 VSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVLAATAMSNPAYKAVLDSSPSSNSSWEMMK 863
Query: 93 EILLCKTGYKNDVSDRRVILYLNDC 19
EILLC +KNDVSDRRVILYLNDC
Sbjct: 864 EILLCGVSFKNDVSDRRVILYLNDC 888
>ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit family protein [Populus
trichocarpa] gi|550346661|gb|EEE84013.2| DNA-directed RNA
polymerase alpha subunit family protein [Populus
trichocarpa]
Length = 842
Score = 376 bits (966), Expect = e-102
Identities = 192/324 (59%), Positives = 246/324 (75%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S LK D +RD+V S++ +I SI+ KG VL FFN +QPLLME LF EGFSVSLKDF
Sbjct: 485 SNVLKVDFNRDVVASMINEILISIFFEKGSGAVLKFFNALQPLLMENLFSEGFSVSLKDF 544
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
A+ + I+ S + +L LRS YNELV LQ E +++ +K+P+ +F+ SALG L
Sbjct: 545 SISQAVKQSIQESFKVISPLLCNLRSTYNELVELQVENHIQDVKTPVLEFILTSSALGYL 604
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID+K+D A+ K+V+QIGFLGLQ+ D+GK YSK LV+D + F +K+ + L+ PS YGL
Sbjct: 605 IDSKSDGAVAKLVQQIGFLGLQVSDRGKLYSKTLVEDLASHFQSKYPTNLLNYPSAQYGL 664
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
++SSFFHGL +E + H+ISTRE+IVRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RNV
Sbjct: 665 IQSSFFHGLDAYEEMAHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNV 724
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
C+ SI+Q +Y +S + GEPVGVLAATA+SNPAYKAVLDS+ S+NSSW++MKE
Sbjct: 725 CSNSIIQSEYGVKVGAESQSLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMKE 784
Query: 90 ILLCKTGYKNDVSDRRVILYLNDC 19
ILLCK G+KND +DRRVILY N C
Sbjct: 785 ILLCKVGFKNDQADRRVILYFNYC 808
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 375 bits (964), Expect = e-101
Identities = 189/324 (58%), Positives = 247/324 (76%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S FLK D +RD+V S++ +I S++ KG VL FFN +QP+LME LF EGFSVSL+DF
Sbjct: 571 SNFLKVDFNRDVVASVINEILISMFFEKGSGAVLKFFNSLQPMLMENLFSEGFSVSLEDF 630
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
A+ + I S + +L LRS +NELV LQ E +++ +K P+ +F+ SALG L
Sbjct: 631 SISRAVKQRIPESFKAISPLLCNLRSTFNELVELQVENHIRDVKQPVREFILTSSALGYL 690
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID+K+D+A+ KVV+QIGFLGLQ+ D+GK YSK LV+D + F++K+ + D PS YGL
Sbjct: 691 IDSKSDAAVTKVVQQIGFLGLQVSDRGKLYSKTLVEDLASHFLSKYPANLFDYPSAQYGL 750
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
+++SFFHGL +E + H+ISTRE+IVRSSRGL+EPGTLFKNLMAILRDV+ICYDGT+RNV
Sbjct: 751 IQNSFFHGLDAYEEMAHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNV 810
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
+ SI+Q +Y +S + GEPVGVLAATA+SNPAYKAVLDS+ S+N SW++MKE
Sbjct: 811 SSNSIIQFEYGVKVGTESQSLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNCSWDMMKE 870
Query: 90 ILLCKTGYKNDVSDRRVILYLNDC 19
ILLCK G+KND++DRRVILYLNDC
Sbjct: 871 ILLCKVGFKNDLADRRVILYLNDC 894
>ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Brachypodium
distachyon]
Length = 1935
Score = 375 bits (963), Expect = e-101
Identities = 186/326 (57%), Positives = 248/326 (76%), Gaps = 1/326 (0%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
S +K D +++ VQ+ +D+ +SI KGP L F N +QPLLME L ++GFSVSL+DF
Sbjct: 548 STVIKLDLAKESVQASFSDLVSSILCVKGPGGALQFLNALQPLLMEYLLLDGFSVSLQDF 607
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
++EE+ +SIQ+ +L Q R ++ V ++ + LK +K I+DF+ + S LG L
Sbjct: 608 NVPKVLLEEVHKSIQEQSLVLEQSRCSKSQFVEMRVDNNLKDVKQQISDFVVESSHLGLL 667
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHF-FSELDCPSEAYG 454
ID K++ ++ KVV+Q+GF+GLQL+ +GK+YS LV+DCF++F++KH P EAYG
Sbjct: 668 IDPKSEPSMSKVVQQLGFVGLQLYREGKFYSSRLVEDCFSSFVDKHPPIVGNQHPPEAYG 727
Query: 453 LVKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRN 274
LV++S+FHGL P+E LVH+ISTRE IVRSSRGLTEPGTLFKNLMAILRDV+ICYDGT+RN
Sbjct: 728 LVQNSYFHGLNPYEELVHSISTREAIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRN 787
Query: 273 VCTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMK 94
+C+ SI+Q+KY +D+ D + +PGEPVGVLAATAISNPAYKAVLD+SQSNN+SW MK
Sbjct: 788 ICSNSIMQLKYNEDDATDIPSALTPGEPVGVLAATAISNPAYKAVLDASQSNNTSWASMK 847
Query: 93 EILLCKTGYKNDVSDRRVILYLNDCS 16
EIL K YKND +DR+VIL+LNDCS
Sbjct: 848 EILQTKVSYKNDTNDRKVILFLNDCS 873
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 375 bits (962), Expect = e-101
Identities = 187/324 (57%), Positives = 244/324 (75%)
Frame = -2
Query: 990 SEFLKFDSSRDIVQSLLTDIPTSIYRSKGPKDVLNFFNYIQPLLMEVLFMEGFSVSLKDF 811
SE L D S +V SL+ DI TSI+ K +DVL+FFN +QPLLME LF EGFSV L+DF
Sbjct: 564 SEVLLLDCSTSLVPSLINDIGTSIFFEKSAEDVLSFFNSMQPLLMENLFSEGFSVGLEDF 623
Query: 810 YFQTAIIEEIRRSIQKNCFILGQLRSGYNELVHLQFEKYLKSLKSPIADFLFKFSALGSL 631
A I++I++ +++ +L +R+ YNELV +Q E +++ +K P+++F+ SALG L
Sbjct: 624 ALPRASIQDIQKGLKEISPLLFHMRTVYNELVEMQLENHIRKVKEPVSNFILNSSALGDL 683
Query: 630 IDAKNDSAIVKVVEQIGFLGLQLFDQGKYYSKALVDDCFTTFMNKHFFSELDCPSEAYGL 451
ID+K+DSA+ KVV+Q+GFLG QL+DQGK YSK LV+D + + NK+ +D PS +GL
Sbjct: 684 IDSKSDSAMNKVVQQVGFLGRQLYDQGKLYSKTLVEDVSSLYQNKYPSDIVDYPSAEFGL 743
Query: 450 VKSSFFHGLAPFEGLVHAISTREIIVRSSRGLTEPGTLFKNLMAILRDVIICYDGTIRNV 271
V F HGL P EG++H+I+TRE+IVRSSRGL+EPGTLFKNLMA LRDV+ICYDGT+RNV
Sbjct: 744 VHRGFVHGLDPVEGMIHSIATREVIVRSSRGLSEPGTLFKNLMATLRDVVICYDGTVRNV 803
Query: 270 CTGSIVQIKYLDDEVVDSLTTASPGEPVGVLAATAISNPAYKAVLDSSQSNNSSWELMKE 91
C+ SI+Q +Y GEPVGVLAATA+SNPAYKAVLDS+ S+NSSW+LMKE
Sbjct: 804 CSNSIIQFEYGVKSGSGPENLFPAGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDLMKE 863
Query: 90 ILLCKTGYKNDVSDRRVILYLNDC 19
ILLCK +KN++ DRRV+LYLNDC
Sbjct: 864 ILLCKVNFKNELIDRRVVLYLNDC 887