BLASTX nr result
ID: Zingiber23_contig00030034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00030034
(251 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004979793.1| PREDICTED: splicing factor U2af large subuni... 169 5e-40
gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays] 169 5e-40
gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| sp... 169 5e-40
gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indi... 169 5e-40
ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG4... 169 5e-40
gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splici... 169 5e-40
ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group] g... 169 5e-40
gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa ... 169 5e-40
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni... 168 6e-40
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni... 168 6e-40
ref|XP_006466768.1| PREDICTED: splicing factor U2af large subuni... 168 8e-40
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni... 168 8e-40
ref|XP_006466765.1| PREDICTED: splicing factor U2af large subuni... 168 8e-40
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni... 168 8e-40
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr... 168 8e-40
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr... 168 8e-40
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni... 168 8e-40
emb|CBI17547.3| unnamed protein product [Vitis vinifera] 168 8e-40
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera] 168 8e-40
gb|EMT26945.1| Splicing factor U2af large subunit A [Aegilops ta... 167 1e-39
>ref|XP_004979793.1| PREDICTED: splicing factor U2af large subunit A-like [Setaria
italica]
Length = 593
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 340 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 399
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 400 SFGPLRGFDLVKDRETGNSKGYA 422
>gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 342 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 401
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 402 SFGPLRGFDLVKDRETGNSKGYA 424
>gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| splicing factor U2AF
subunit [Zea mays]
Length = 594
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 342 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 401
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 402 SFGPLRGFDLVKDRETGNSKGYA 424
>gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 320 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 379
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 380 SFGPLRGFDLVKDRETGNSKGYA 402
>ref|NP_001152419.1| LOC100286059 [Zea mays] gi|195656099|gb|ACG47517.1| splicing factor
U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 344 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 403
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 404 SFGPLRGFDLVKDRETGNSKGYA 426
>gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
Length = 550
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 320 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 379
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 380 SFGPLRGFDLVKDRETGNSKGYA 402
>ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName:
Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A gi|108864607|gb|ABA94914.2| U2 snRNP
auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa
Japonica Group] gi|222616290|gb|EEE52422.1| hypothetical
protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 320 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 379
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 380 SFGPLRGFDLVKDRETGNSKGYA 402
>gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
Length = 331
Score = 169 bits (427), Expect = 5e-40
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 115 TDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 174
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 175 SFGPLRGFDLVKDRETGNSKGYA 197
>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 168 bits (426), Expect = 6e-40
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 336 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 395
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 396 SFGPLRGFDLVKDRETGNSKGYA 418
>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 168 bits (426), Expect = 6e-40
Identities = 81/83 (97%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 336 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 395
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 396 SFGPLRGFDLVKDRETGNSKGYA 418
>ref|XP_006466768.1| PREDICTED: splicing factor U2af large subunit B-like isoform X6
[Citrus sinensis]
Length = 368
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 116 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 175
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 176 SFGPLRGFDLVKDRETGNSKGYA 198
>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
[Citrus sinensis]
Length = 380
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 128 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 187
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 188 SFGPLRGFDLVKDRETGNSKGYA 210
>ref|XP_006466765.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Citrus sinensis] gi|568824768|ref|XP_006466766.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X4 [Citrus sinensis]
Length = 394
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 142 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 201
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 202 SFGPLRGFDLVKDRETGNSKGYA 224
>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Citrus sinensis]
Length = 581
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 329 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 388
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 389 SFGPLRGFDLVKDRETGNSKGYA 411
>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
gi|557527705|gb|ESR38955.1| hypothetical protein
CICLE_v10025221mg [Citrus clementina]
Length = 592
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 340 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 399
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 400 SFGPLRGFDLVKDRETGNSKGYA 422
>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X1 [Citrus
sinensis] gi|557527704|gb|ESR38954.1| hypothetical
protein CICLE_v10025221mg [Citrus clementina]
Length = 593
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 341 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 400
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 401 SFGPLRGFDLVKDRETGNSKGYA 423
>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 316 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 375
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 376 SFGPLRGFDLVKDRETGNSKGYA 398
>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 141 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 200
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 201 SFGPLRGFDLVKDRETGNSKGYA 223
>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 168 bits (425), Expect = 8e-40
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
SDYNPSLAA LGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE Q+RELLE
Sbjct: 313 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 372
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 373 SFGPLRGFDLVKDRETGNSKGYA 395
>gb|EMT26945.1| Splicing factor U2af large subunit A [Aegilops tauschii]
Length = 663
Score = 167 bits (423), Expect = 1e-39
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 251 SDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQVRELLE 72
+DYNPSLAAALGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE QVRELLE
Sbjct: 410 TDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLE 469
Query: 71 SFGPLRGFDLVKDRETGNSKGYA 3
SFGPLRGFDLVKDRETGNSKGYA
Sbjct: 470 SFGPLRGFDLVKDRETGNSKGYA 492