BLASTX nr result

ID: Zingiber23_contig00029773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00029773
         (396 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFE85505.1| putative CC-NBS-LRR disease resistance protein, p...   181   1e-43

>gb|AFE85505.1| putative CC-NBS-LRR disease resistance protein, partial [Zingiber
           zerumbet]
          Length = 759

 Score =  181 bits (458), Expect = 1e-43
 Identities = 111/194 (57%), Positives = 115/194 (59%), Gaps = 62/194 (31%)
 Frame = -1

Query: 396 GKIPTNEVSQWLREVEELEGQVAAIKQDFQSMS-------CFSC---------------- 286
           GKIPTNEVSQWLRE E LEG+VA I+QDFQSMS        FSC                
Sbjct: 101 GKIPTNEVSQWLREAEILEGKVADIEQDFQSMSEYSPVLLSFSCQFKLVALNLLQAATAF 160

Query: 285 ------------------NCFNQTGGTSS---------------------QTQEEAGDQL 223
                             NCFN TGGTSS                     QTQ  AGD +
Sbjct: 161 CYISIVHCSVFVRVASVANCFNLTGGTSSNRTDAFAANIQEDELENAATDQTQR-AGDDV 219

Query: 222 SIRESSNCCSIIRRVAKKLSEANELMSRAGALDPIVTVRPPGPTVMLSISHRPPVGIESY 43
            IRESSNCCSII+R AKKL EANELMSRAGALDPI TV P  PTVML ISHRPPVGIESY
Sbjct: 220 PIRESSNCCSIIQRAAKKLDEANELMSRAGALDPIATVGPLKPTVMLPISHRPPVGIESY 279

Query: 42  VEGIVGYIDGGEGN 1
           VE IVGYIDGGEGN
Sbjct: 280 VEDIVGYIDGGEGN 293


Top