BLASTX nr result
ID: Zingiber23_contig00029405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00029405
(238 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518037.1| PREDICTED: zinc finger protein JACKDAW-like ... 63 4e-08
ref|XP_003517239.1| PREDICTED: zinc finger protein MAGPIE-like [... 60 3e-07
ref|XP_004291889.1| PREDICTED: zinc finger protein MAGPIE-like [... 59 7e-07
tpg|DAA43968.1| TPA: hypothetical protein ZEAMMB73_502759 [Zea m... 59 7e-07
ref|NP_001146099.1| uncharacterized protein LOC100279631 [Zea ma... 59 7e-07
ref|XP_004985335.1| PREDICTED: zinc finger protein MAGPIE-like [... 58 1e-06
ref|XP_003558583.1| PREDICTED: zinc finger protein NUTCRACKER-li... 57 3e-06
dbj|BAK07185.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 3e-06
>ref|XP_003518037.1| PREDICTED: zinc finger protein JACKDAW-like [Glycine max]
gi|356498399|ref|XP_003518040.1| PREDICTED: zinc finger
protein JACKDAW-like [Glycine max]
Length = 525
Score = 63.2 bits (152), Expect = 4e-08
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Frame = +3
Query: 15 MSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVARDSSALWWGHQLQLEPEPAPI 194
MSATALLQKAAQMGAAAT +S L G + + + + + + L WGHQ QLEPE +
Sbjct: 382 MSATALLQKAAQMGAAATNASLLRGLGIVSSSPLDSTSSGQQNVLQWGHQQQLEPESGSV 441
Query: 195 --------LPYE------QDLMMGSSAL 236
LP E ++LMMG+S++
Sbjct: 442 AAAGLGLGLPCEDGGSGLKELMMGTSSM 469
>ref|XP_003517239.1| PREDICTED: zinc finger protein MAGPIE-like [Glycine max]
Length = 517
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 12/86 (13%)
Frame = +3
Query: 15 MSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVARDSSALWWGHQLQLEPEPAPI 194
MSATALLQKAAQMGAAAT +SFL G + + + SV +D+ L WGHQ +EPE A +
Sbjct: 375 MSATALLQKAAQMGAAATNASFLRGLGIVSSSASTSSVQQDN--LQWGHQ-PVEPESASV 431
Query: 195 -------LPYE-----QDLMMGSSAL 236
LP + ++LMMG+ ++
Sbjct: 432 PAGLGLGLPCDSSSGLKELMMGTPSM 457
>ref|XP_004291889.1| PREDICTED: zinc finger protein MAGPIE-like [Fragaria vesca subsp.
vesca]
Length = 510
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/55 (60%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 15 MSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVARDSSA-LWWGHQLQLE 176
MSATALLQKAAQMGAA T SFL GF LDT + PP+ A+DS+A L W + ++
Sbjct: 358 MSATALLQKAAQMGAATTSESFLRGFGLDTSSSPPQ--AQDSTASLQWSNNSHIQ 410
>tpg|DAA43968.1| TPA: hypothetical protein ZEAMMB73_502759 [Zea mays]
Length = 366
Score = 58.9 bits (141), Expect = 7e-07
Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 29/106 (27%)
Frame = +3
Query: 6 SSHMSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVAR---------------DS 140
S+HMSATALLQKAAQMGA ++ SSFL G LD + P + + D+
Sbjct: 65 SAHMSATALLQKAAQMGATSSSSSFLRGLGLDVSSSSPGASSSGQQHQHQEAMRVSLPDA 124
Query: 141 SALWWGHQLQLEPEPAPI------LPYEQ--------DLMMGSSAL 236
S W +L+LEP P LPY+ +LMMG S+L
Sbjct: 125 SLQQWPPRLELEPAPMLSAGLGLGLPYDSTGAQVSLPELMMGQSSL 170
>ref|NP_001146099.1| uncharacterized protein LOC100279631 [Zea mays]
gi|195611732|gb|ACG27696.1| nucleic acid binding protein
[Zea mays] gi|219885469|gb|ACL53109.1| unknown [Zea
mays] gi|219885701|gb|ACL53225.1| unknown [Zea mays]
gi|414865412|tpg|DAA43969.1| TPA: nucleic acid binding
protein [Zea mays]
Length = 539
Score = 58.9 bits (141), Expect = 7e-07
Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 29/106 (27%)
Frame = +3
Query: 6 SSHMSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVAR---------------DS 140
S+HMSATALLQKAAQMGA ++ SSFL G LD + P + + D+
Sbjct: 366 SAHMSATALLQKAAQMGATSSSSSFLRGLGLDVSSSSPGASSSGQQHQHQEAMRVSLPDA 425
Query: 141 SALWWGHQLQLEPEPAPI------LPYEQ--------DLMMGSSAL 236
S W +L+LEP P LPY+ +LMMG S+L
Sbjct: 426 SLQQWPPRLELEPAPMLSAGLGLGLPYDSTGAQVSLPELMMGQSSL 471
>ref|XP_004985335.1| PREDICTED: zinc finger protein MAGPIE-like [Setaria italica]
Length = 537
Score = 57.8 bits (138), Expect = 1e-06
Identities = 43/106 (40%), Positives = 54/106 (50%), Gaps = 29/106 (27%)
Frame = +3
Query: 6 SSHMSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVA-------------RDSSA 146
S HMSATALLQKAAQMGA ++ SSFL LD + P S + D+S
Sbjct: 363 SPHMSATALLQKAAQMGATSSSSSFLRCLGLDVSSSPGASSSGQQHHHEAMQASLPDTSM 422
Query: 147 LWWGHQLQLEPEPAPI--------LPYEQ--------DLMMGSSAL 236
W ++EPEP+P+ LPY+ DLMMG S+L
Sbjct: 423 QQWPQ--RMEPEPSPMLSPGLGLGLPYDSSGAPVCLPDLMMGQSSL 466
>ref|XP_003558583.1| PREDICTED: zinc finger protein NUTCRACKER-like [Brachypodium
distachyon]
Length = 527
Score = 57.0 bits (136), Expect = 3e-06
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 35/108 (32%)
Frame = +3
Query: 6 SSHMSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVARDSSALWWGHQLQ----- 170
S HMSATALLQKAAQMGA ++ SS+L G LD + P S + HQ Q
Sbjct: 344 SPHMSATALLQKAAQMGATSSSSSYLRGLGLDISSSSPASTSSGQQHNQHQHQQQEATMH 403
Query: 171 --------------LEPEPAPI--------LPYE--------QDLMMG 224
LEPEPAP+ LPYE +LMMG
Sbjct: 404 VSFPEGSLPQWPPRLEPEPAPMMSAGLGLGLPYELTGGPVGNPELMMG 451
>dbj|BAK07185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 56.6 bits (135), Expect = 3e-06
Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 36/113 (31%)
Frame = +3
Query: 6 SSHMSATALLQKAAQMGAAATRSSFLEGFCLDTPTGPPESVARDSSALWWGHQL------ 167
S+HMSATALLQKAAQMGA ++ SSFL G LD + P S + HQ
Sbjct: 344 SAHMSATALLQKAAQMGATSSSSSFLRGLGLDISSSSPASTSSGQQQHHQHHQQHQEAMQ 403
Query: 168 --------------QLEPEPAPI--------LPYEQ--------DLMMGSSAL 236
+LEPEPAP+ LPY +LMM S+L
Sbjct: 404 MPFPDGSSLQQWPPRLEPEPAPMMSAGLGLGLPYNSTGGPMGLPELMMDQSSL 456