BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00029290
         (1462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354193.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   563   e-158
ref|XP_004228633.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   561   e-157
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   556   e-155
ref|XP_002453503.1| hypothetical protein SORBIDRAFT_04g006980 [S...   550   e-154
ref|XP_004951531.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   550   e-154
gb|AFW70669.1| putative DEAD-box ATP-dependent RNA helicase fami...   547   e-153
ref|XP_006446872.1| hypothetical protein CICLE_v10017882mg [Citr...   540   e-151
ref|XP_003571087.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   540   e-151
ref|XP_006468942.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   540   e-151
ref|XP_006468941.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   540   e-151
gb|EMT32669.1| DEAD-box ATP-dependent RNA helicase 41 [Aegilops ...   538   e-150
sp|Q0E2Z7.2|RH41_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   538   e-150
gb|EEE56516.1| hypothetical protein OsJ_05798 [Oryza sativa Japo...   538   e-150
gb|EEC72698.1| hypothetical protein OsI_06281 [Oryza sativa Indi...   538   e-150
gb|EMS56659.1| DEAD-box ATP-dependent RNA helicase 41 [Triticum ...   537   e-150
ref|XP_004303760.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   535   e-149
ref|XP_002320399.1| hypothetical protein POPTR_0014s13620g [Popu...   535   e-149
ref|XP_004303761.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   535   e-149
ref|XP_006647045.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   534   e-149
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   523   e-146

>ref|XP_006354193.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
            [Solanum tuberosum] gi|565375350|ref|XP_006354194.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like
            isoform X2 [Solanum tuberosum]
          Length = 527

 Score =  563 bits (1451), Expect = e-158
 Identities = 271/399 (67%), Positives = 335/399 (83%)
 Frame = -3

Query: 1199 ECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKNPRL 1020
            E  VK+RC +QREALP EP CVICGRYGEYICD+TD+DICS+ECK ILL+R  K++ P  
Sbjct: 15   EDDVKERCWDQREALPGEPRCVICGRYGEYICDETDDDICSLECKGILLSRLAKSRQPTA 74

Query: 1019 NPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFSSCY 840
             P P VK+P  DEC+YV+ N+K+++  LT+ Q E LR K+++ +KG + P P+LSF+SC 
Sbjct: 75   RPCP-VKLPATDECYYVRDNDKSEVNPLTTDQTELLRRKLDILVKGDTTPPPILSFASCK 133

Query: 839  LPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCSSIR 660
            LP+KL +N+E AGY +PTPVQMQAIPAAL R++LLVSA+TGSGKT SFL+P++S C+   
Sbjct: 134  LPQKLLENIEVAGYEMPTPVQMQAIPAALARQSLLVSAETGSGKTGSFLIPIVSQCAKFN 193

Query: 659  LRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQNGV 480
              H   Q+ PLA+VL+PTRELCIQVE+QAK+LGKGLPFKTALVVGGD +AGQ++RIQ GV
Sbjct: 194  EEHFQNQQQPLAMVLTPTRELCIQVEDQAKVLGKGLPFKTALVVGGDAMAGQLHRIQQGV 253

Query: 479  ELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQALMFS 300
             LIV TPGRLIDLLTKH+IEL  +SILV+DEVDCMLQ GFR+QVMQIF ALSQPQ LM+S
Sbjct: 254  SLIVGTPGRLIDLLTKHEIELDTISILVLDEVDCMLQRGFREQVMQIFTALSQPQVLMYS 313

Query: 299  ATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQHYN 120
            AT+ K+VE+MASSMA  +  ISVGKPN+P+ +VK + IWV+SK+KKQKLF+ILMSKQHY 
Sbjct: 314  ATIPKDVEKMASSMAKKVTVISVGKPNKPNQAVKQLAIWVDSKRKKQKLFDILMSKQHYK 373

Query: 119  PPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            PPV++FV SRLGAD+LSEAI  +TG+KALSIHGEK+MKD
Sbjct: 374  PPVIIFVDSRLGADLLSEAITVSTGLKALSIHGEKSMKD 412


>ref|XP_004228633.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Solanum
            lycopersicum]
          Length = 527

 Score =  561 bits (1447), Expect = e-157
 Identities = 270/399 (67%), Positives = 334/399 (83%)
 Frame = -3

Query: 1199 ECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKNPRL 1020
            E  VK+RC +QREALP EP C++CGRYGEYICD+TD+DICS+ECK ILL+R  +++ P  
Sbjct: 15   EDDVKERCWDQREALPGEPRCIVCGRYGEYICDETDDDICSLECKGILLSRLGESRQPTA 74

Query: 1019 NPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFSSCY 840
             P P VK+P  DEC+YV+ N K+++  LT+ Q E LR K+++ +KG + P P+LSF+SC 
Sbjct: 75   RPCP-VKLPATDECYYVRDNGKSEVNPLTTEQTELLRRKLDILVKGDTTPPPILSFASCK 133

Query: 839  LPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCSSIR 660
            LP+KL +N+E AGY +PTPVQMQAIPAAL R++LLVSA+TGSGKT SFL+P++S C+   
Sbjct: 134  LPQKLLENIEVAGYEMPTPVQMQAIPAALARQSLLVSAETGSGKTGSFLIPIVSQCAKFN 193

Query: 659  LRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQNGV 480
              H   Q+ PLA+VL+PTRELCIQVE+QAK+LGKGLPFKTALVVGGD +AGQ++RIQ GV
Sbjct: 194  EEHFPNQQQPLAMVLTPTRELCIQVEDQAKVLGKGLPFKTALVVGGDAMAGQLHRIQQGV 253

Query: 479  ELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQALMFS 300
             LIV TPGRLIDLLTKH+IEL  +SILV+DEVDCMLQ GFR+QVMQIF ALSQPQ LM+S
Sbjct: 254  SLIVGTPGRLIDLLTKHEIELDTISILVLDEVDCMLQRGFREQVMQIFTALSQPQVLMYS 313

Query: 299  ATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQHYN 120
            AT+ K+VE+MASSMA  +  ISVGKPN+P+ SVK + IWV+SK+KKQKLF+ILMSKQHY 
Sbjct: 314  ATIPKDVEKMASSMAKKVTVISVGKPNKPNQSVKQLAIWVDSKRKKQKLFDILMSKQHYK 373

Query: 119  PPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            PPV+VFV SRLGAD+LSEAI  +TG+KALSIHGEK+MKD
Sbjct: 374  PPVIVFVDSRLGADLLSEAITVSTGLKALSIHGEKSMKD 412


>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
            vinifera]
          Length = 540

 Score =  556 bits (1432), Expect = e-155
 Identities = 282/424 (66%), Positives = 343/424 (80%), Gaps = 1/424 (0%)
 Frame = -3

Query: 1271 NMEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTD 1092
            N   N +    D+ GT D         VK+RC +QREALP EP CVICGRYGEYICD+TD
Sbjct: 8    NQGKNSVELTDDNEGTADG--------VKERCWDQREALPGEPKCVICGRYGEYICDETD 59

Query: 1091 EDICSIECKTILLARHEKTKNPRLNPAPLVKIPTNDECFYVK-GNNKTDLGGLTSIQIES 915
            +DICS+ECK  LL R  K++ P + P P  ++PT DECFYV+   +K+    LT  Q E 
Sbjct: 60   DDICSLECKQTLLCRVAKSRLPVVLPPP-KRLPTTDECFYVRDSGDKSGSQSLTGSQTEM 118

Query: 914  LRSKIELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLL 735
            LR ++E+C++G    +P+LSFSSC LP+KL +N+E+AGY IPTPVQMQAIPAAL  +NLL
Sbjct: 119  LRRRLEICVRGDFDLSPILSFSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLL 178

Query: 734  VSADTGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKG 555
            VSADTGSGKTASFLVP++S C+SIR  H   QKNPLA+VL+PTRELC+QVEEQAKLLGKG
Sbjct: 179  VSADTGSGKTASFLVPIVSRCTSIRPDHSPNQKNPLAMVLTPTRELCMQVEEQAKLLGKG 238

Query: 554  LPFKTALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCM 375
            LPFKTALVVGGD +  Q++RIQ GVELIV TPGRLIDLL+KH+IEL +V +LV+DEVDCM
Sbjct: 239  LPFKTALVVGGDAMPRQLHRIQQGVELIVGTPGRLIDLLSKHEIELDDVFMLVLDEVDCM 298

Query: 374  LQNGFRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKH 195
            L+ GFRDQVMQI++ALSQPQ LM+SAT+S+EVE++ASSMA D+I ISVGK NRP+ +VK 
Sbjct: 299  LERGFRDQVMQIYRALSQPQVLMYSATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQ 358

Query: 194  IVIWVESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEK 15
            + IWVESK+KKQKLF+IL SKQH+ PPVVVFVGSRLGAD+L+EAI   TG+KALSIHGEK
Sbjct: 359  LAIWVESKQKKQKLFDILTSKQHFTPPVVVFVGSRLGADLLTEAITITTGLKALSIHGEK 418

Query: 14   TMKD 3
            +MK+
Sbjct: 419  SMKE 422


>ref|XP_002453503.1| hypothetical protein SORBIDRAFT_04g006980 [Sorghum bicolor]
            gi|241933334|gb|EES06479.1| hypothetical protein
            SORBIDRAFT_04g006980 [Sorghum bicolor]
          Length = 539

 Score =  550 bits (1418), Expect = e-154
 Identities = 262/402 (65%), Positives = 329/402 (81%)
 Frame = -3

Query: 1208 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKN 1029
            +  + PVK+RC EQREALP EP CV+CGRYGEYICDQTD+DICS+ECKTILLAR      
Sbjct: 21   ELEDLPVKERCFEQREALPGEPRCVVCGRYGEYICDQTDDDICSVECKTILLARIAAKTK 80

Query: 1028 PRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFS 849
            P +  A  V +P  DE F +K  N  ++  L   +I SLR+K+++C+KG +VP P++ FS
Sbjct: 81   PAVKAAKRVNLPLGDESFCIKDINFPNIPTLADSRISSLRTKLDICVKGDAVPDPIMCFS 140

Query: 848  SCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCS 669
            +C LPEKL  NLE+AGY +PTPVQMQ IPA++  R+LLVSADTGSGKTASFL+P+I++CS
Sbjct: 141  ACGLPEKLVHNLETAGYCMPTPVQMQVIPASMSNRSLLVSADTGSGKTASFLIPIIAHCS 200

Query: 668  SIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQ 489
             +R +  T  + PLA+VL+PTRELC+QVEEQAK+LGKGLPFKTALVVGGDPL  QIYRI+
Sbjct: 201  QVRSQESTSNQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLPQQIYRIE 260

Query: 488  NGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQAL 309
            NG+ELIV TPGRLIDLL KH+++L+ VS+ V+DEVDC+L+ GFRDQ MQIFQ+LSQPQ +
Sbjct: 261  NGIELIVGTPGRLIDLLMKHNVDLTYVSVFVLDEVDCLLERGFRDQAMQIFQSLSQPQVM 320

Query: 308  MFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQ 129
            MFSAT+  EVE+M++S+A ++I IS G PNRP+ SVK +VIWVESKKKKQK+FEI+ SKQ
Sbjct: 321  MFSATLHSEVEKMSNSLAKNVISISCGNPNRPTKSVKQVVIWVESKKKKQKIFEIMKSKQ 380

Query: 128  HYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            H+ PP VVFV SR+GAD+LSEAI  ATG++ +SIHGEKTMK+
Sbjct: 381  HFKPPAVVFVSSRVGADLLSEAITVATGLEVVSIHGEKTMKE 422


>ref|XP_004951531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
            [Setaria italica] gi|514708419|ref|XP_004951532.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like
            isoform X2 [Setaria italica]
          Length = 539

 Score =  550 bits (1416), Expect = e-154
 Identities = 264/420 (62%), Positives = 336/420 (80%)
 Frame = -3

Query: 1262 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 1083
            DN + S  D+N       + ++ PVK+RC EQREALP EP CV+CGRYGEYICD+TD+DI
Sbjct: 10   DNLLVSASDNN-------ELQDLPVKERCFEQREALPGEPRCVVCGRYGEYICDETDDDI 62

Query: 1082 CSIECKTILLARHEKTKNPRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSK 903
            CS+ECKTILLAR        +  A  V +P  DE F +K  N  D+  L   +I +LRSK
Sbjct: 63   CSVECKTILLARVAAKTKSAVKAAKRVNLPLGDESFCIKDTNFPDIPTLADRRISALRSK 122

Query: 902  IELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSAD 723
            +++C+KG +VP P++ FSSC LPEKL  NLE+AGY +PTPVQMQ IPA++  R+LLVSAD
Sbjct: 123  LDICVKGDAVPDPIMCFSSCGLPEKLVHNLETAGYCMPTPVQMQVIPASMSNRSLLVSAD 182

Query: 722  TGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFK 543
            TGSGKTASFL+P+I++CS +R +  T ++ PLA+VL+PTRELC+QVEEQAK+LGKGLPFK
Sbjct: 183  TGSGKTASFLIPIIAHCSQVRSQECTSKRGPLAIVLAPTRELCLQVEEQAKVLGKGLPFK 242

Query: 542  TALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNG 363
            TALVVGGDPLA QIYRI+NG+ELIV +PGRLIDLL KH+++L++VS+ V+DEVDC+LQ G
Sbjct: 243  TALVVGGDPLAQQIYRIENGIELIVGSPGRLIDLLMKHNVDLTDVSVFVLDEVDCLLQRG 302

Query: 362  FRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIW 183
            FRDQ +QIFQ+LS PQ +MFSAT+  EVE+M++S+A  +I IS G P+RP+ SVK +VIW
Sbjct: 303  FRDQALQIFQSLSNPQVMMFSATLHSEVEKMSNSLAKAVIRISCGNPSRPNKSVKQVVIW 362

Query: 182  VESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            VESKKKKQK+FEI+ SKQH+ PP VVFV SR+GAD+LSEAI  ATG++ +SIHGEKTM +
Sbjct: 363  VESKKKKQKIFEIMKSKQHFKPPAVVFVSSRVGADLLSEAITVATGLEVVSIHGEKTMNE 422


>gb|AFW70669.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform 1
            [Zea mays] gi|413936119|gb|AFW70670.1| putative DEAD-box
            ATP-dependent RNA helicase family protein isoform 2 [Zea
            mays]
          Length = 539

 Score =  547 bits (1409), Expect = e-153
 Identities = 264/418 (63%), Positives = 334/418 (79%)
 Frame = -3

Query: 1262 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 1083
            D+ + S  D+N       +  + PVK+RC EQREALP EP CV+CGRYGEYICDQTD+DI
Sbjct: 10   DSFVVSSSDNN-------ELEDLPVKERCFEQREALPGEPRCVVCGRYGEYICDQTDDDI 62

Query: 1082 CSIECKTILLARHEKTKNPRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSK 903
            CS+ECKTILL+R      P +  A  V +P  DE F +K  N  ++  L   +I SLRSK
Sbjct: 63   CSVECKTILLSRIVAKTKPAVKAAKRVNLPLGDESFCIKDINFPNILTLADSRISSLRSK 122

Query: 902  IELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSAD 723
            +++C+KG +VP P++ FS+C LPEKL  NLE+AGY +PTPVQMQ IPA++  R+LLVSAD
Sbjct: 123  LDICVKGDAVPDPIMCFSACGLPEKLVHNLETAGYCMPTPVQMQVIPASMSNRSLLVSAD 182

Query: 722  TGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFK 543
            TGSGKTASFL+P+I++CS +R +  TG + PLA+VL+PTRELC+QVEEQAK+LGKGLPFK
Sbjct: 183  TGSGKTASFLIPIIAHCSRLRSQECTGNQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFK 242

Query: 542  TALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNG 363
            TAL+VGGDPL  QIYRI+NGVELIV TPGRLIDLL KH+++L+ VS+ V+DEVDC+L+ G
Sbjct: 243  TALIVGGDPLPQQIYRIENGVELIVGTPGRLIDLLMKHNVDLTYVSVFVLDEVDCLLERG 302

Query: 362  FRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIW 183
            FRDQ MQIFQ+LS PQ +MFSAT+  EVE+M++S+A+++I IS G PNRP+  VK +VIW
Sbjct: 303  FRDQAMQIFQSLSHPQVMMFSATIHSEVEKMSNSLANNVISISCGNPNRPNKLVKQVVIW 362

Query: 182  VESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTM 9
            VESKKKKQK+FEI+ SKQH+ PP VVFV SR+GAD+LSEAI  ATG++ +SIHGEKTM
Sbjct: 363  VESKKKKQKIFEIMKSKQHFKPPAVVFVSSRVGADLLSEAITVATGLEVVSIHGEKTM 420


>ref|XP_006446872.1| hypothetical protein CICLE_v10017882mg [Citrus clementina]
            gi|557549483|gb|ESR60112.1| hypothetical protein
            CICLE_v10017882mg [Citrus clementina]
          Length = 533

 Score =  540 bits (1392), Expect = e-151
 Identities = 273/425 (64%), Positives = 337/425 (79%), Gaps = 3/425 (0%)
 Frame = -3

Query: 1268 MEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDE 1089
            M +NQ  ++   +G  D   D     VK+  ++QREALP EP CVICGRYGEYICD+TD+
Sbjct: 1    MANNQNMAIPHGDGVDDSQSD-----VKEWSKDQREALPEEPKCVICGRYGEYICDETDD 55

Query: 1088 DICSIECKTILLARHEKTKNPR--LNPAPLVKIPTNDECFYVKGNNKTD-LGGLTSIQIE 918
            D+CS+ECK  LL R          + P P  ++P  DECFYV+ +++      LT  Q +
Sbjct: 56   DVCSLECKQKLLCRVANANRGMRVVPPPPPERLPATDECFYVRESDENSGFQSLTIGQTD 115

Query: 917  SLRSKIELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNL 738
            SLR ++E+ +KG +VPAP+LSFSSC L +KL +N+E+AGY +PTPVQMQAIP+AL  ++L
Sbjct: 116  SLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSL 175

Query: 737  LVSADTGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGK 558
            LVSA+TGSGKTASFLVPVIS C++IRL H   QKNPLA+VL+PTRELCIQVEEQAKLLGK
Sbjct: 176  LVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235

Query: 557  GLPFKTALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDC 378
            GLPFKTALVVGGD +A Q+YRIQ GVELIV TPGRLIDLL KHDIEL ++ + V+DEVDC
Sbjct: 236  GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295

Query: 377  MLQNGFRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVK 198
            MLQ GFRDQVMQIF+ALS PQ LM+SAT+S+EVE+M+SS++ D++ +SVGKPN P+ +VK
Sbjct: 296  MLQRGFRDQVMQIFRALSLPQILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVK 355

Query: 197  HIVIWVESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGE 18
             + IWVES KKKQKLF+ILMSKQH+ PP VV+VGSRLGAD+LS AI   TG+KALSIHGE
Sbjct: 356  QLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGE 415

Query: 17   KTMKD 3
            K MK+
Sbjct: 416  KPMKE 420


>ref|XP_003571087.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Brachypodium
            distachyon]
          Length = 634

 Score =  540 bits (1391), Expect = e-151
 Identities = 259/406 (63%), Positives = 327/406 (80%)
 Frame = -3

Query: 1220 DPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHE 1041
            D + +  +  VK+RC EQREALP EP CVICGRYGEYICDQTD+DICS+ECKT LLAR  
Sbjct: 112  DASKELEDLRVKERCIEQREALPGEPRCVICGRYGEYICDQTDDDICSVECKTSLLARIA 171

Query: 1040 KTKNPRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPV 861
                P +     V +P  DE F V+ NN  D+  L + QI SLR+K+++C+KG ++P PV
Sbjct: 172  AKTKPPVKAPVRVDVPFGDESFCVRDNNFPDIPSLRASQIASLRTKLDICVKGEAIPDPV 231

Query: 860  LSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVI 681
            + FSSC LPEKL  NLE+AGY +PTPVQMQ I A+L  R+LLVSADTGSGKT SFLVP+I
Sbjct: 232  MCFSSCGLPEKLVHNLETAGYTMPTPVQMQVISASLSDRSLLVSADTGSGKTVSFLVPII 291

Query: 680  SYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQI 501
            ++CS  R    T ++ PLA+VL+PTRELC+QVEEQAK+LGKGLPFKTALVVGGDPLA QI
Sbjct: 292  AHCSRGRSEQCTSKRGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQI 351

Query: 500  YRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQ 321
            YRI+NG+ELIV TPGRLIDLL KH+++L +VS+ V+DEVDC+L+ GFRDQ MQIF+ALS+
Sbjct: 352  YRIENGIELIVGTPGRLIDLLMKHNVDLDDVSVFVLDEVDCLLERGFRDQAMQIFRALSR 411

Query: 320  PQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEIL 141
            PQ +MFSAT+  EVE++++SMA+++I IS G PNRP+ SVK +VIWVE+K+KKQK+ EI+
Sbjct: 412  PQVMMFSATIHSEVEKLSNSMANNMIHISCGNPNRPNKSVKQVVIWVETKQKKQKILEIM 471

Query: 140  MSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
             SKQH+ PP V+FV SR+GAD+LSEA+  A G++ +SIHGEKTMK+
Sbjct: 472  KSKQHFKPPAVIFVSSRVGADLLSEALTAAIGLEVISIHGEKTMKE 517


>ref|XP_006468942.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X2
            [Citrus sinensis]
          Length = 533

 Score =  540 bits (1390), Expect = e-151
 Identities = 272/425 (64%), Positives = 337/425 (79%), Gaps = 3/425 (0%)
 Frame = -3

Query: 1268 MEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDE 1089
            M +NQ  ++   +G  D   D     VK+  ++QREALP EP CVICGRYGEYICD+TD+
Sbjct: 1    MANNQNMAIPHGDGVDDSQSD-----VKEWSKDQREALPEEPKCVICGRYGEYICDETDD 55

Query: 1088 DICSIECKTILLARHEKTKNPR--LNPAPLVKIPTNDECFYVKGNNKTD-LGGLTSIQIE 918
            D+CS+ECK  LL R          + P P  ++P  DECFYV+ +++      LT  Q +
Sbjct: 56   DVCSLECKQKLLCRVANANRGMRVVPPPPPERLPATDECFYVRESDENSGFQSLTIGQTD 115

Query: 917  SLRSKIELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNL 738
            SLR ++E+ +KG +VPAP+LSFSSC L +KL +N+E+AGY +PTPVQMQAIP+AL  ++L
Sbjct: 116  SLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSL 175

Query: 737  LVSADTGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGK 558
            LVSA+TGSGKTASFLVPVIS C++IRL H   QKNPLA+VL+PTRELCIQVEEQAKLLGK
Sbjct: 176  LVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235

Query: 557  GLPFKTALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDC 378
            GLPFKTALVVGGD +A Q+YRIQ GVELIV TPGRLIDLL KHDIEL ++ + V+DEVDC
Sbjct: 236  GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295

Query: 377  MLQNGFRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVK 198
            MLQ GFRDQVMQIF+A+S PQ LM+SAT+S+EVE+M+SS++ D++ +SVGKPN P+ +VK
Sbjct: 296  MLQRGFRDQVMQIFRAISLPQILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVK 355

Query: 197  HIVIWVESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGE 18
             + IWVES KKKQKLF+ILMSKQH+ PP VV+VGSRLGAD+LS AI   TG+KALSIHGE
Sbjct: 356  QLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGE 415

Query: 17   KTMKD 3
            K MK+
Sbjct: 416  KPMKE 420


>ref|XP_006468941.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform X1
            [Citrus sinensis]
          Length = 533

 Score =  540 bits (1390), Expect = e-151
 Identities = 272/425 (64%), Positives = 337/425 (79%), Gaps = 3/425 (0%)
 Frame = -3

Query: 1268 MEDNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDE 1089
            M +NQ  ++   +G  D   D     VK+  ++QREALP EP CVICGRYGEYICD+TD+
Sbjct: 1    MANNQNMAIPHGDGVDDSQSD-----VKEWSKDQREALPEEPKCVICGRYGEYICDETDD 55

Query: 1088 DICSIECKTILLARHEKTKNPR--LNPAPLVKIPTNDECFYVKGNNKTD-LGGLTSIQIE 918
            D+CS+ECK  LL R          + P P  ++P  DECFYV+ +++      LT  Q +
Sbjct: 56   DVCSLECKQKLLCRVANANRGMRVVPPPPPERLPATDECFYVRESDENSGFQSLTIGQTD 115

Query: 917  SLRSKIELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNL 738
            SLR ++E+ +KG +VPAP+LSFSSC L +KL +N+E+AGY +PTPVQMQAIP+AL  ++L
Sbjct: 116  SLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSL 175

Query: 737  LVSADTGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGK 558
            LVSA+TGSGKTASFLVPVIS C++IRL H   QKNPLA+VL+PTRELCIQVEEQAKLLGK
Sbjct: 176  LVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235

Query: 557  GLPFKTALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDC 378
            GLPFKTALVVGGD +A Q+YRIQ GVELIV TPGRLIDLL KHDIEL ++ + V+DEVDC
Sbjct: 236  GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295

Query: 377  MLQNGFRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVK 198
            MLQ GFRDQVMQIF+A+S PQ LM+SAT+S+EVE+M+SS++ D++ +SVGKPN P+ +VK
Sbjct: 296  MLQRGFRDQVMQIFRAISLPQILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVK 355

Query: 197  HIVIWVESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGE 18
             + IWVES KKKQKLF+ILMSKQH+ PP VV+VGSRLGAD+LS AI   TG+KALSIHGE
Sbjct: 356  QLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGE 415

Query: 17   KTMKD 3
            K MK+
Sbjct: 416  KPMKE 420


>gb|EMT32669.1| DEAD-box ATP-dependent RNA helicase 41 [Aegilops tauschii]
          Length = 541

 Score =  538 bits (1387), Expect = e-150
 Identities = 264/421 (62%), Positives = 337/421 (80%), Gaps = 1/421 (0%)
 Frame = -3

Query: 1262 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 1083
            DN ++   D N          +  VK+RC EQREALP EP CVICGRYGEYICDQTD+DI
Sbjct: 10   DNLVSPSDDRN-----ELQVEDLRVKERCFEQREALPGEPRCVICGRYGEYICDQTDDDI 64

Query: 1082 CSIECKTILLAR-HEKTKNPRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRS 906
            CS+ECKT LLAR   +TK P   PA  VK+P  DE F V+ NN  D+  L + QI SLR+
Sbjct: 65   CSVECKTALLARIAAETKIPVKAPAR-VKVPFGDESFCVRDNNFPDIPSLHASQIASLRN 123

Query: 905  KIELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSA 726
            K+++C+KG ++P P++ FSSC LPEKL  NL++AGY +PTPVQMQ IPA++  R+LLVSA
Sbjct: 124  KLDICVKGEAIPDPIMCFSSCGLPEKLVHNLDAAGYTMPTPVQMQVIPASISNRSLLVSA 183

Query: 725  DTGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPF 546
            DTGSGKTASFLVP+I++CS   L+    ++ PLA+VL+PTRELC+QVE+QAK+LGKGLPF
Sbjct: 184  DTGSGKTASFLVPIIAHCSRRELQQSESKRGPLAIVLAPTRELCLQVEDQAKVLGKGLPF 243

Query: 545  KTALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQN 366
            KTALVVGGDPLA QIYRI+NGVELIV TPGRLIDLL KH+++L++VS+ V+DEVDC+L+ 
Sbjct: 244  KTALVVGGDPLAQQIYRIENGVELIVGTPGRLIDLLMKHNVDLTDVSVFVLDEVDCLLER 303

Query: 365  GFRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVI 186
            GFRDQ MQIF+ALS PQ +MFSAT+  E+E++++S+ +++I IS G P +P+ SV+ +VI
Sbjct: 304  GFRDQAMQIFRALSCPQVMMFSATIHPEIEKLSNSLLNNMIHISCGNPGKPNKSVRQVVI 363

Query: 185  WVESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMK 6
            WVESK+KKQK+FEI+ SKQH+ PP VVFV SR+GAD+LSEAI  ATG++ +SIHGEKTMK
Sbjct: 364  WVESKQKKQKIFEIIKSKQHFKPPAVVFVSSRVGADLLSEAITAATGLEVISIHGEKTMK 423

Query: 5    D 3
            +
Sbjct: 424  E 424


>sp|Q0E2Z7.2|RH41_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 41
            gi|46390396|dbj|BAD15860.1| putative DEAD box [Oryza
            sativa Japonica Group] gi|215701515|dbj|BAG92939.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|215767715|dbj|BAG99943.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 536

 Score =  538 bits (1386), Expect = e-150
 Identities = 260/402 (64%), Positives = 325/402 (80%)
 Frame = -3

Query: 1208 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKN 1029
            +  E  VK+RC EQREAL  EP CVICGRYGEYICDQTD+DICS+ECKTILL++      
Sbjct: 21   ELEESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDDDICSVECKTILLSKLSAETR 80

Query: 1028 PRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFS 849
            P +  A  V +P  DE F ++  N   +  +   QI SLRSK+++C+KG  VP P++ FS
Sbjct: 81   PVVKAAKRVNLPVGDESFCIRDENFPKIPSMHDGQIASLRSKLDICVKGEDVPDPIMCFS 140

Query: 848  SCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCS 669
            S  LPEKL  NLE+AGYV+PTPVQMQ IP+++  R+LLVSADTGSGKTASFLVP+I++CS
Sbjct: 141  SSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAHCS 200

Query: 668  SIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQ 489
             +R    T ++ PLA+VL+PTRELC+QVEEQAK+LGKGLPFKTALVVGGDPLA QIYRI+
Sbjct: 201  HVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYRIE 260

Query: 488  NGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQAL 309
            NG+ELIV TPGRLIDLL KH+++L++V + V+DEVDC+L+ GFRDQVMQIFQALS PQ +
Sbjct: 261  NGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVMQIFQALSHPQVM 320

Query: 308  MFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQ 129
            MFSATV+ EVE+M++S+A + I IS G P+RP+ SVK +VIWVESK+KKQK+FEI+ SKQ
Sbjct: 321  MFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTSKQ 380

Query: 128  HYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            H+ PP VVFV SR+GAD+LSEAI  ATG+K +SIHG+KTM +
Sbjct: 381  HFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNE 422


>gb|EEE56516.1| hypothetical protein OsJ_05798 [Oryza sativa Japonica Group]
          Length = 648

 Score =  538 bits (1386), Expect = e-150
 Identities = 260/402 (64%), Positives = 325/402 (80%)
 Frame = -3

Query: 1208 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKN 1029
            +  E  VK+RC EQREAL  EP CVICGRYGEYICDQTD+DICS+ECKTILL++      
Sbjct: 66   ELEESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDDDICSVECKTILLSKLSAETR 125

Query: 1028 PRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFS 849
            P +  A  V +P  DE F ++  N   +  +   QI SLRSK+++C+KG  VP P++ FS
Sbjct: 126  PVVKAAKRVNLPVGDESFCIRDENFPKIPSMHDGQIASLRSKLDICVKGEDVPDPIMCFS 185

Query: 848  SCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCS 669
            S  LPEKL  NLE+AGYV+PTPVQMQ IP+++  R+LLVSADTGSGKTASFLVP+I++CS
Sbjct: 186  SSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAHCS 245

Query: 668  SIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQ 489
             +R    T ++ PLA+VL+PTRELC+QVEEQAK+LGKGLPFKTALVVGGDPLA QIYRI+
Sbjct: 246  HVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYRIE 305

Query: 488  NGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQAL 309
            NG+ELIV TPGRLIDLL KH+++L++V + V+DEVDC+L+ GFRDQVMQIFQALS PQ +
Sbjct: 306  NGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVMQIFQALSHPQVM 365

Query: 308  MFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQ 129
            MFSATV+ EVE+M++S+A + I IS G P+RP+ SVK +VIWVESK+KKQK+FEI+ SKQ
Sbjct: 366  MFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTSKQ 425

Query: 128  HYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            H+ PP VVFV SR+GAD+LSEAI  ATG+K +SIHG+KTM +
Sbjct: 426  HFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNE 467


>gb|EEC72698.1| hypothetical protein OsI_06281 [Oryza sativa Indica Group]
          Length = 648

 Score =  538 bits (1386), Expect = e-150
 Identities = 260/402 (64%), Positives = 325/402 (80%)
 Frame = -3

Query: 1208 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKN 1029
            +  E  VK+RC EQREAL  EP CVICGRYGEYICDQTD+DICS+ECKTILL++      
Sbjct: 66   ELEESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDDDICSVECKTILLSKLSAETR 125

Query: 1028 PRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFS 849
            P +  A  V +P  DE F ++  N   +  +   QI SLRSK+++C+KG  VP P++ FS
Sbjct: 126  PVVKAAKRVNLPVGDESFCIRDENFPKIPSMHDGQIASLRSKLDICVKGEDVPDPIMCFS 185

Query: 848  SCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCS 669
            S  LPEKL  NLE+AGYV+PTPVQMQ IP+++  R+LLVSADTGSGKTASFLVP+I++CS
Sbjct: 186  SSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAHCS 245

Query: 668  SIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQ 489
             +R    T ++ PLA+VL+PTRELC+QVEEQAK+LGKGLPFKTALVVGGDPLA QIYRI+
Sbjct: 246  HVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYRIE 305

Query: 488  NGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQAL 309
            NG+ELIV TPGRLIDLL KH+++L++V + V+DEVDC+L+ GFRDQVMQIFQALS PQ +
Sbjct: 306  NGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVMQIFQALSHPQVM 365

Query: 308  MFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQ 129
            MFSATV+ EVE+M++S+A + I IS G P+RP+ SVK +VIWVESK+KKQK+FEI+ SKQ
Sbjct: 366  MFSATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTSKQ 425

Query: 128  HYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            H+ PP VVFV SR+GAD+LSEAI  ATG+K +SIHG+KTM +
Sbjct: 426  HFKPPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNE 467


>gb|EMS56659.1| DEAD-box ATP-dependent RNA helicase 41 [Triticum urartu]
          Length = 487

 Score =  537 bits (1383), Expect = e-150
 Identities = 262/421 (62%), Positives = 338/421 (80%), Gaps = 1/421 (0%)
 Frame = -3

Query: 1262 DNQIASLMDHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDI 1083
            DN ++   D N          +  VK+RC EQREALP EP CVICGRYGEYICDQTD+DI
Sbjct: 10   DNLVSPSDDRN-----ELQVEDLRVKERCFEQREALPGEPRCVICGRYGEYICDQTDDDI 64

Query: 1082 CSIECKTILLAR-HEKTKNPRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRS 906
            CS+ECKT LLAR   +TK P   PA  +K+P  DE F V+ NN  D+  L + QI SLR+
Sbjct: 65   CSVECKTALLARIAAETKIPVKAPAR-IKVPFGDESFCVRDNNFPDIPSLHASQIVSLRN 123

Query: 905  KIELCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSA 726
            K+++C+KG ++P P++ FSSC LPEKL  NL++AGY +PTPVQMQ IPA++  R+LLVSA
Sbjct: 124  KLDICVKGEAIPDPIMCFSSCGLPEKLVHNLDAAGYTMPTPVQMQVIPASISNRSLLVSA 183

Query: 725  DTGSGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPF 546
            DTGSGKTASFLVP+I++CS   L+    ++ PLA+VL+PTRELC+QVE+QAK+LGKGLPF
Sbjct: 184  DTGSGKTASFLVPIIAHCSWRELQQCESKRGPLAIVLAPTRELCLQVEDQAKVLGKGLPF 243

Query: 545  KTALVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQN 366
            KTALVVGGDPLA QIYRI+NGVELIV TPGRLIDLL KH+++L++VS+ V+DEVDC+L+ 
Sbjct: 244  KTALVVGGDPLAQQIYRIENGVELIVGTPGRLIDLLMKHNVDLTDVSVFVLDEVDCLLER 303

Query: 365  GFRDQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVI 186
            GFRDQ MQIF+ALS PQ +MFSAT+  E+E++++S+++++I IS G P +P+ SV+ +VI
Sbjct: 304  GFRDQAMQIFRALSCPQVMMFSATIHSEIEKLSNSLSNNMIHISCGNPGKPNKSVRQVVI 363

Query: 185  WVESKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMK 6
            WVESK+KKQK+FEI+ SKQH+ PP VVFV SR+GAD+LSEAI  ATG++ +SIHGEKTM+
Sbjct: 364  WVESKQKKQKIFEIIKSKQHFKPPAVVFVSSRVGADLLSEAITAATGLEVISIHGEKTME 423

Query: 5    D 3
            +
Sbjct: 424  E 424


>ref|XP_004303760.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 526

 Score =  535 bits (1379), Expect = e-149
 Identities = 269/418 (64%), Positives = 331/418 (79%), Gaps = 6/418 (1%)
 Frame = -3

Query: 1238 DHNGTLDPACDTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTI 1059
            + +G    + D     VK+R ++QRE LP EP CVICGRYGEYICDQTD+DICS+ECK  
Sbjct: 5    NQDGQCKSSTDDVNDEVKERSRDQREPLPGEPKCVICGRYGEYICDQTDDDICSLECKQT 64

Query: 1058 LLARHEKTKNPRLNPAPLVKIPTNDECFYVKGNNKTDLGGL--TSI----QIESLRSKIE 897
            LL+R   ++   ++  P  ++P NDECFYV+     D GG   TS+    Q E LR +++
Sbjct: 65   LLSRVTNSQLA-VSQCPPKRLPANDECFYVR-----DAGGQYGTSVLPDGQTELLRKRLD 118

Query: 896  LCIKGTSVPAPVLSFSSCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTG 717
            + +KG   P P+LSF+SC LP+KL +N+E+AGY +PTPVQMQAIPAAL  +NLLVSADTG
Sbjct: 119  IHVKGDIAPGPILSFASCNLPQKLVQNIEAAGYEMPTPVQMQAIPAALSGKNLLVSADTG 178

Query: 716  SGKTASFLVPVISYCSSIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTA 537
            SGKTASFL+P++S CS  R  H+TG+K PLA+VL+PTRELCIQVEEQAKLLGKGLPFKTA
Sbjct: 179  SGKTASFLIPIVSCCSHFRFEHLTGEKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTA 238

Query: 536  LVVGGDPLAGQIYRIQNGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFR 357
            LVVGGD +  Q++RIQ GVELIV TPGRLIDLL  HDIEL +V I V+DEVDCMLQ GFR
Sbjct: 239  LVVGGDAMPRQLFRIQQGVELIVGTPGRLIDLLANHDIELEDVRIFVLDEVDCMLQRGFR 298

Query: 356  DQVMQIFQALSQPQALMFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVE 177
            DQVMQIF+ALSQPQ L++SAT S+++E+M SSM+ D+  ISVGKPNRP+ +VK + IWVE
Sbjct: 299  DQVMQIFRALSQPQVLLYSATTSQDIEKMVSSMSKDVTVISVGKPNRPNKAVKQVPIWVE 358

Query: 176  SKKKKQKLFEILMSKQHYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            SK+KKQKLF+ILMSKQH+ PP VV+V SRLGAD+LS AI   TG+KALSIHGEK+MK+
Sbjct: 359  SKQKKQKLFDILMSKQHFMPPAVVYVASRLGADLLSNAIRVTTGVKALSIHGEKSMKE 416


>ref|XP_002320399.1| hypothetical protein POPTR_0014s13620g [Populus trichocarpa]
            gi|222861172|gb|EEE98714.1| hypothetical protein
            POPTR_0014s13620g [Populus trichocarpa]
          Length = 524

 Score =  535 bits (1378), Expect = e-149
 Identities = 268/396 (67%), Positives = 323/396 (81%)
 Frame = -3

Query: 1190 VKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKNPRLNPA 1011
            VK+  ++QREALP EP CV+CGRYGEYICDQTD DICS+ECK  LL R   T  P  +P 
Sbjct: 19   VKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECKQTLLGRAADTHLPVGHPL 78

Query: 1010 PLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFSSCYLPE 831
            P  ++   DECFYV+ +       LTS Q E LR K+E+ +KG SVP P+LSFSSC LPE
Sbjct: 79   PK-RLAATDECFYVRDSESP----LTSDQTELLRRKLEIHVKGDSVPDPILSFSSCNLPE 133

Query: 830  KLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCSSIRLRH 651
            KL  N+++ GY +PTP+QMQ I AAL  ++LL SADTGSGKTASFLVPV+S C++ R  +
Sbjct: 134  KLLHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSRCATFRHGN 193

Query: 650  VTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQNGVELI 471
            ++  K PLA+VL+PTRELCIQVEEQAKLLGKGLPFKTALV+GGD +  Q+YRIQ GVELI
Sbjct: 194  ISKSKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMPRQLYRIQQGVELI 253

Query: 470  VATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQALMFSATV 291
            V TPGRLIDLL KHDIEL ++ ILV+DEVDCMLQ GFRDQVMQIF+ALSQPQ LM+SAT+
Sbjct: 254  VGTPGRLIDLLAKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRALSQPQVLMYSATM 313

Query: 290  SKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQHYNPPV 111
            S+EVE+MASSMA DLIF+S+G+PNRPS +VK + IWVESK+KKQKLF+ILMSKQH+ PP 
Sbjct: 314  SQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMSKQHFLPPS 373

Query: 110  VVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            +V+VGSR+GAD+LS AI   TG+KALSIHGEK+MK+
Sbjct: 374  IVYVGSRIGADLLSNAITVTTGLKALSIHGEKSMKE 409


>ref|XP_004303761.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 517

 Score =  535 bits (1377), Expect = e-149
 Identities = 267/402 (66%), Positives = 326/402 (81%), Gaps = 6/402 (1%)
 Frame = -3

Query: 1190 VKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKNPRLNPA 1011
            VK+R ++QRE LP EP CVICGRYGEYICDQTD+DICS+ECK  LL+R   ++   ++  
Sbjct: 12   VKERSRDQREPLPGEPKCVICGRYGEYICDQTDDDICSLECKQTLLSRVTNSQLA-VSQC 70

Query: 1010 PLVKIPTNDECFYVKGNNKTDLGGL--TSI----QIESLRSKIELCIKGTSVPAPVLSFS 849
            P  ++P NDECFYV+     D GG   TS+    Q E LR ++++ +KG   P P+LSF+
Sbjct: 71   PPKRLPANDECFYVR-----DAGGQYGTSVLPDGQTELLRKRLDIHVKGDIAPGPILSFA 125

Query: 848  SCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCS 669
            SC LP+KL +N+E+AGY +PTPVQMQAIPAAL  +NLLVSADTGSGKTASFL+P++S CS
Sbjct: 126  SCNLPQKLVQNIEAAGYEMPTPVQMQAIPAALSGKNLLVSADTGSGKTASFLIPIVSCCS 185

Query: 668  SIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQ 489
              R  H+TG+K PLA+VL+PTRELCIQVEEQAKLLGKGLPFKTALVVGGD +  Q++RIQ
Sbjct: 186  HFRFEHLTGEKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMPRQLFRIQ 245

Query: 488  NGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQAL 309
             GVELIV TPGRLIDLL  HDIEL +V I V+DEVDCMLQ GFRDQVMQIF+ALSQPQ L
Sbjct: 246  QGVELIVGTPGRLIDLLANHDIELEDVRIFVLDEVDCMLQRGFRDQVMQIFRALSQPQVL 305

Query: 308  MFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQ 129
            ++SAT S+++E+M SSM+ D+  ISVGKPNRP+ +VK + IWVESK+KKQKLF+ILMSKQ
Sbjct: 306  LYSATTSQDIEKMVSSMSKDVTVISVGKPNRPNKAVKQVPIWVESKQKKQKLFDILMSKQ 365

Query: 128  HYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            H+ PP VV+V SRLGAD+LS AI   TG+KALSIHGEK+MK+
Sbjct: 366  HFMPPAVVYVASRLGADLLSNAIRVTTGVKALSIHGEKSMKE 407


>ref|XP_006647045.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Oryza
            brachyantha]
          Length = 539

 Score =  534 bits (1375), Expect = e-149
 Identities = 260/402 (64%), Positives = 322/402 (80%)
 Frame = -3

Query: 1208 DTRECPVKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKN 1029
            +  E P+K+RC EQREAL  EP CVICGRYGEYICDQTD+DICS+ECKTILL+R      
Sbjct: 21   ELEESPIKERCFEQREALLGEPRCVICGRYGEYICDQTDDDICSVECKTILLSRLSAETK 80

Query: 1028 PRLNPAPLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFS 849
            P +     V +P  DE F ++  N   +  +   QI SLRSK+++ +KG  VP P++ FS
Sbjct: 81   PAVKAVKRVNLPVGDESFCIRDKNFPKIPSMHDGQISSLRSKLDIRVKGEDVPDPIMCFS 140

Query: 848  SCYLPEKLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCS 669
            S  LPE+L  NLE+AGYV+PTPVQMQ IPA++  R+LLVSADTGSGKTASFLVP+I++CS
Sbjct: 141  SSGLPERLVLNLEAAGYVMPTPVQMQVIPASICNRSLLVSADTGSGKTASFLVPIIAHCS 200

Query: 668  SIRLRHVTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQ 489
              RL   T ++ PLA+VL+PTRELC+QVEEQAK+L KGLPFKTALVVGGDPLA QIYRI+
Sbjct: 201  QARLHECTDKQGPLAIVLAPTRELCLQVEEQAKVLAKGLPFKTALVVGGDPLAQQIYRIE 260

Query: 488  NGVELIVATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQAL 309
            NG+ELIV TPGRLIDLL KH+ +L+ VSI V+DEVDC+L+ GFRDQ MQIFQALS PQ +
Sbjct: 261  NGIELIVGTPGRLIDLLMKHNADLNNVSIFVLDEVDCLLERGFRDQAMQIFQALSHPQVM 320

Query: 308  MFSATVSKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQ 129
            MFSATV+ EVE+M++S+A ++I IS G P++P+NSVK +VIWVESK+KKQKLFEI+ SKQ
Sbjct: 321  MFSATVNSEVEKMSNSLARNVIHISCGNPSKPNNSVKQVVIWVESKQKKQKLFEIMTSKQ 380

Query: 128  HYNPPVVVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            H+ PP VVFV SR+GAD+LSE I  ATG++ LSIHG+KTM +
Sbjct: 381  HFKPPAVVFVNSRVGADLLSEVITVATGLEVLSIHGDKTMNE 422


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 514

 Score =  523 bits (1347), Expect = e-146
 Identities = 267/396 (67%), Positives = 320/396 (80%)
 Frame = -3

Query: 1190 VKQRCQEQREALPREPHCVICGRYGEYICDQTDEDICSIECKTILLARHEKTKNPRLNPA 1011
            VK+  +EQREAL  EP CV+CGRYGEYICD+TD+DICS+ECK ILL    K+      P 
Sbjct: 14   VKKTSREQREALQGEPKCVLCGRYGEYICDETDDDICSLECKQILLGGVGKSDISVGIPP 73

Query: 1010 PLVKIPTNDECFYVKGNNKTDLGGLTSIQIESLRSKIELCIKGTSVPAPVLSFSSCYLPE 831
            P  ++   DECFYV+ N  + L   T+ Q E LR  +E+ +KG  VP P+LSFSSC LP+
Sbjct: 74   PR-RLAATDECFYVRENGTSSL---TNDQTELLRRTLEIHVKGELVPDPILSFSSCNLPQ 129

Query: 830  KLEKNLESAGYVIPTPVQMQAIPAALERRNLLVSADTGSGKTASFLVPVISYCSSIRLRH 651
            KL  NLE+AGY +PTPVQMQAIP AL  ++LL SADTGSGKTAS+LVP+IS C+S RL+H
Sbjct: 130  KLLLNLEAAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYLVPIISSCASYRLQH 189

Query: 650  VTGQKNPLAVVLSPTRELCIQVEEQAKLLGKGLPFKTALVVGGDPLAGQIYRIQNGVELI 471
             + +K PLA+VL+PTRELCIQVE+QAKL GKGLPFKTALVVGGD +AGQ+YRIQ GVELI
Sbjct: 190  SSDRK-PLAMVLTPTRELCIQVEDQAKLFGKGLPFKTALVVGGDAMAGQLYRIQQGVELI 248

Query: 470  VATPGRLIDLLTKHDIELSEVSILVVDEVDCMLQNGFRDQVMQIFQALSQPQALMFSATV 291
            V TPGRLIDLLTKHDIEL  + I V+DEVDCMLQ GFRDQVMQIF ALSQPQ L++SATV
Sbjct: 249  VGTPGRLIDLLTKHDIELDNMIIFVIDEVDCMLQRGFRDQVMQIFWALSQPQVLLYSATV 308

Query: 290  SKEVERMASSMADDLIFISVGKPNRPSNSVKHIVIWVESKKKKQKLFEILMSKQHYNPPV 111
            ++EVE+MASSMA D+  +S+G+PNRPS +VK + IWVE K+KKQKLF+ILMSKQH+ PP 
Sbjct: 309  TQEVEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKLFDILMSKQHFMPPA 368

Query: 110  VVFVGSRLGADVLSEAIFTATGIKALSIHGEKTMKD 3
            VV+VGSRLGAD+LS AI   TG K+LSIHGEK+MK+
Sbjct: 369  VVYVGSRLGADLLSNAITVTTGWKSLSIHGEKSMKE 404