BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00029186
         (1605 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A...   459   e-126
emb|CBI29694.3| unnamed protein product [Vitis vinifera]              435   e-119
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   431   e-118
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5...   424   e-116
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   399   e-108
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   398   e-108
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...   387   e-105
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts...   384   e-104
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th...   381   e-103
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264...   375   e-101
ref|XP_004141560.1| PREDICTED: uncharacterized protein LOC101208...   371   e-100
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...   370   e-100
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts...   369   2e-99
ref|XP_006652316.1| PREDICTED: regulator of nonsense transcripts...   366   1e-98
ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296...   364   7e-98
ref|XP_006441553.1| hypothetical protein CICLE_v10019695mg [Citr...   362   2e-97
gb|AFW58318.1| hypothetical protein ZEAMMB73_385077 [Zea mays]        362   3e-97
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts...   361   6e-97
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts...   360   1e-96
emb|CAH66847.1| H0525C06.10 [Oryza sativa Indica Group] gi|21819...   358   4e-96

>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
            gi|548862693|gb|ERN20051.1| hypothetical protein
            AMTR_s00071p00188270 [Amborella trichopoda]
          Length = 599

 Score =  459 bits (1182), Expect = e-126
 Identities = 277/566 (48%), Positives = 366/566 (64%), Gaps = 37/566 (6%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  FRPGKNS K+QRHSR YI+FKRPEDV+EFAEFF GH+FVNEKG+QFKA+VEYAPSQ
Sbjct: 37   EWAAFRPGKNSLKNQRHSRIYIDFKRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK W KKDGREGTI KDPEY+EFLE ++KPAE+LPSAEIQLER+EAERAGA KE+ I+
Sbjct: 97   RVPKPWSKKDGREGTIFKDPEYLEFLEFLAKPAENLPSAEIQLERREAERAGASKESLIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKR-LGV-XXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMDFVR+KRAAK+G+ +   NGK S+R  GV          KRG +RRK++TS YVL+
Sbjct: 157  TPLMDFVRQKRAAKSGTLRSSANGKTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLR 216

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDE-----------FGPG 923
            DS K    KDK TY L+ R+++Q    D S  V +    E ++DE            G  
Sbjct: 217  DSTKGTSSKDKSTYGLVPRRDEQ-KLPDNSSAVSALAGPEALDDESVGVADVTAATVGGT 275

Query: 922  VESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVK----GSPIFSSKKNQTSGRIIKSI 755
            +ESGK + +LLKGK+RE+S A   + Q Q V+SP++     +P   S++   + R++KSI
Sbjct: 276  LESGKKKVLLLKGKDREASQASGSVVQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSI 335

Query: 754  LT-KEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDD 581
            L+ K+GR   + +  T TEQQ+Q  ++E DK P RP S  L SKDH+       S+SD D
Sbjct: 336  LSNKDGRQVPAHV-LTQTEQQLQGLSLEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSD 394

Query: 580  -KKYTDGKAAVDNKHVSV-SSEKHERRTRNKDRPDRGVWAPLRRPDRSQSND--RIPPEV 413
             KK  D K   ++ +  V ++EK E+RTRNKDRPDR VW PLRR D   + D  ++  + 
Sbjct: 395  PKKALDQKITGNDSYGLVPANEKQEKRTRNKDRPDRAVWTPLRRSDGIHTVDESQMTSDS 454

Query: 412  VQPSANSSE-----------GL-SVSQQAVGKVREDEV-VIQTRNARGSNLLAAHETPLG 272
            ++  +N+ E           GL S +  ++GK R  ++    +R+ RG++  ++ E  L 
Sbjct: 455  LEKLSNAQELKLGDDTEECDGLGSNASSSMGKSRTSDLGYHNSRSGRGAS-SSSSEHSLN 513

Query: 271  YGERKPDLSYASRSEDIKIHGGRRVDYSGAENGSHRHVGRRGSLRSLKDTDSSLNPSEGK 92
             G+ K D S ASRS ++K  G  R      ENGSHRH GRR S   LKD D S+N  +GK
Sbjct: 514  QGDTKFDTSSASRSLEMKTQGTGRSSTVSVENGSHRHAGRRSSSTGLKDADGSMNLPDGK 573

Query: 91   NSKRGS-TVYSSHERQVWVQKSGSAS 17
              KRG    Y +HE+Q+WVQKSG+ +
Sbjct: 574  PVKRGGIPSYGAHEKQIWVQKSGTGT 599


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  435 bits (1119), Expect = e-119
 Identities = 264/536 (49%), Positives = 341/536 (63%), Gaps = 13/536 (2%)
 Frame = -3

Query: 1591 FRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPK 1412
            FRPGKNSQK Q +SRAY++FKRPEDV+EFAEFF GH+FVNEKG QFK +VEYAPSQR+PK
Sbjct: 41   FRPGKNSQKRQSYSRAYLDFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPK 100

Query: 1411 LWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPIITPLM 1232
             W KKDGREGTI KDPEYMEF+EL++KP E+LPSAEIQLER+EAERAGA+K+ PI+TPLM
Sbjct: 101  HWPKKDGREGTIFKDPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLM 160

Query: 1231 DFVRRKRAAKNGSQKLFGNGKVSKRL--GVXXXXXXXXAKRGSDRRKVATSNYVLKDSMK 1058
            DFVR+KRAAK  S++   NGK+S+R             +KRGS++R+++T+ YVL+D+ K
Sbjct: 161  DFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAK 220

Query: 1057 KRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFG--PGVESGKTRFVLLKG 884
                KDK T+IL+ +++DQ+  SDKSVN+ +    E +E+E G    V++GK + +LLKG
Sbjct: 221  STSAKDKSTFILVPKRDDQL-LSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKG 279

Query: 883  KERESSDAPRVLAQHQIVASPVK----GSPIFSSKKNQTSGRIIKSI-LTKEGRMDFSFI 719
            KERE S    +L Q+  V SPVK     +    +++ + SGRII+SI L K+ R   S  
Sbjct: 280  KEREISH--HLLQQN--VTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQS-- 333

Query: 718  NTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNK 542
            +   TEQQ Q +N+E +K P RPP   L SK+         + + DDK        V N 
Sbjct: 334  SMFQTEQQSQASNLEKEKRPPRPPHIQLASKE--------TNGAQDDK-------VVGND 378

Query: 541  HVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDR-IPPEVVQP-SANSSEGLSVSQ 368
              S  SEK ++RTRNKDRPDRGVW PLRR D S ++D  +     QP S++  EG     
Sbjct: 379  VHSFVSEKQDKRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSSDFPEG----- 433

Query: 367  QAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYS 188
                                            +GE + D+S A RS ++K  G  R  +S
Sbjct: 434  -------------------------------SHGEMRSDMSNA-RSGEVKALGSGRGGHS 461

Query: 187  GAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGSTV-YSSHERQVWVQKSGS 23
              +NGSH+H GRRG   S+KD D S   SEGK+SKRGS   Y SHE+QVWVQKS S
Sbjct: 462  ALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSS 517


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  431 bits (1107), Expect = e-118
 Identities = 250/533 (46%), Positives = 336/533 (63%), Gaps = 8/533 (1%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  +RPG NSQK Q +SRAYI+FKRPEDV++FAEFF GHIFVNEKG QFKA+VEY+PSQ
Sbjct: 39   NWLSYRPGNNSQKHQSYSRAYIDFKRPEDVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQ 98

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK W KKDGREGTISKDPEY+EFLEL++KP E+LPSAEIQLER+EAERAGA K+API+
Sbjct: 99   RVPKQWSKKDGREGTISKDPEYLEFLELIAKPVENLPSAEIQLERREAERAGAAKDAPIV 158

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGVXXXXXXXXAKRGSDRRKVATSNYVLKDS 1064
            TPLMDFVR+KR AKNG +++  NGK+S+R G          KRGS++++++T+ YVL+D+
Sbjct: 159  TPLMDFVRQKRVAKNGPRRILSNGKLSRRAGGSGSPSSSSLKRGSEKKRISTTMYVLRDT 218

Query: 1063 MKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDE--FGPGVESGKTRFVLL 890
             K    KDK TY+ + +++DQ  ++  +V + S      +EDE       +SGK + +LL
Sbjct: 219  AKSTSGKDKSTYVHVPKRDDQQLSN--AVTLGSGSGTAVLEDESVVSGITDSGKKKILLL 276

Query: 889  KGKERESSDAPRVLAQHQIVASP---VKGSPIFSSKKNQTSGRIIKSI-LTKEGRMDFSF 722
            KGKE+E S     ++Q Q ++S    +  S    S++ +TSGR+I+SI L K+ R   S 
Sbjct: 277  KGKEKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRS- 335

Query: 721  INTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDN 545
             +  H+E QMQ +N+E +K P RPP A L  KD        A+ + DDK        V N
Sbjct: 336  -SGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKD--------ANGTPDDK-------VVGN 379

Query: 544  KHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQ 365
                  +EK E+RTRNKDRPDRGVW PLRR D S ++D     ++  ++ S++ +  S Q
Sbjct: 380  DLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDE---SLLSSASQSTQSVFDSSQ 436

Query: 364  AVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSG 185
                                           +G+ K D S   RS ++K+ G  R ++S 
Sbjct: 437  G-----------------------------NHGDVKVD-SLNLRSGEVKVLGSGRGNHSS 466

Query: 184  AENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKR-GSTVYSSHERQVWVQKS 29
             +NGSH+H GRRG    ++D D S    E K  KR GS+ Y SHE+QVWVQKS
Sbjct: 467  LDNGSHKHFGRRGPSHIVRDADGS--TVEAKTPKRGGSSGYGSHEKQVWVQKS 517


>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
            gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
            protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
            Smg-4/UPF3 family protein [Populus trichocarpa]
          Length = 527

 Score =  424 bits (1089), Expect = e-116
 Identities = 250/540 (46%), Positives = 336/540 (62%), Gaps = 15/540 (2%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  +RPG NSQK Q +SRAYI+FKRPEDV++FAEFF GHIFVNEKG QFKA+VEY+PSQ
Sbjct: 39   NWLSYRPGNNSQKHQSYSRAYIDFKRPEDVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQ 98

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK W KKDGREGTISKDPEY+EFLEL++KP E+LPSAEIQLER+EAERAGA K+API+
Sbjct: 99   RVPKQWSKKDGREGTISKDPEYLEFLELIAKPVENLPSAEIQLERREAERAGAAKDAPIV 158

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGVXXXXXXXXAKRGSDRRKVATSNYVLKDS 1064
            TPLMDFVR+KR AKNG +++  NGK+S+R G          KRGS++++++T+ YVL+D+
Sbjct: 159  TPLMDFVRQKRVAKNGPRRILSNGKLSRRAGGSGSPSSSSLKRGSEKKRISTTMYVLRDT 218

Query: 1063 MKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDE--FGPGVESGKTRFVLL 890
             K    KDK TY+ + +++DQ  ++  +V + S      +EDE       +SGK + +LL
Sbjct: 219  AKSTSGKDKSTYVHVPKRDDQQLSN--AVTLGSGSGTAVLEDESVVSGITDSGKKKILLL 276

Query: 889  KGKERESSDAPRVLAQHQIVASP---VKGSPIFSSKKNQTSGRIIKSI-LTKEGRMDFSF 722
            KGKE+E S     ++Q Q ++S    +  S    S++ +TSGR+I+SI L K+ R   S 
Sbjct: 277  KGKEKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRS- 335

Query: 721  INTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDN 545
             +  H+E QMQ +N+E +K P RPP A L  KD        A+ + DDK        V N
Sbjct: 336  -SGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKD--------ANGTPDDK-------VVGN 379

Query: 544  KHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQ 365
                  +EK E+RTRNKDRPDRGVW PLRR D S ++D     ++  ++ S++ +  S Q
Sbjct: 380  DLHGFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDE---SLLSSASQSTQSVFDSSQ 436

Query: 364  AVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSG 185
                                           +G+ K D S   RS ++K+ G  R ++S 
Sbjct: 437  G-----------------------------NHGDVKVD-SLNLRSGEVKVLGSGRGNHSS 466

Query: 184  AENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKR-GSTVYSSHE-------RQVWVQKS 29
             +NGSH+H GRRG    ++D D S    E K  KR GS+ Y SHE       +QVWVQKS
Sbjct: 467  LDNGSHKHFGRRGPSHIVRDADGS--TVEAKTPKRGGSSGYGSHEVCSLDSQKQVWVQKS 524


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  399 bits (1025), Expect = e-108
 Identities = 258/538 (47%), Positives = 326/538 (60%), Gaps = 9/538 (1%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  FR GK SQK Q  +RAY++FK+PEDV+EFAEFF GH+FVNEKG QFK +VEYAPSQ
Sbjct: 37   NWVSFRQGKTSQKHQSCARAYLDFKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK W KKDGREGT+ KDPEY+EFLE +SKP E+LPSAEIQLER+EAERAGA KEA I+
Sbjct: 97   RVPKQWSKKDGREGTLLKDPEYLEFLEFISKPVENLPSAEIQLERREAERAGAAKEALIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRL--GVXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMDFVR+KRAAK G ++L  NGK+S+R             +KRGSD++K +T+ YVL+
Sbjct: 157  TPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLR 216

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVES--GKTRFV 896
            D+ K    KDK TYIL+ +++DQ    DK V+  S    E V +E G    S  GK + +
Sbjct: 217  DTAKNSSGKDKSTYILVPKRDDQ--DFDKPVSSSSATGSEVVLEESGVPANSDGGKKKVL 274

Query: 895  LLKGKERESSDAPRVLAQHQ--IVASPVKGSPIFSSKKNQTSGRIIKSI-LTKEGRMDFS 725
            LLKGKERE S     ++  Q   V + +    +  +++ + SGRII+ I L K+ R + +
Sbjct: 275  LLKGKEREISQVSGSVSHQQSASVKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQA 334

Query: 724  FINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVD 548
              +  H+EQ  Q++N+E DK P RP    L  KD          VSDD       K  V+
Sbjct: 335  --SGLHSEQ--QISNLEKDKRPPRPSHVHLVMKD-------TNGVSDD-------KVIVN 376

Query: 547  NKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQ 368
            + H    SEK ERRTRNKDRPDR  W  LRR D S  +D             S   S SQ
Sbjct: 377  DLH----SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSD------------ESLSSSASQ 419

Query: 367  QAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYS 188
             ++  V   E           NL          G+ K DLS   RS ++K  GG R  +S
Sbjct: 420  LSLSAVDSSE----------GNL----------GDGKFDLS-NMRSGEVKAVGGGRSSHS 458

Query: 187  GAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKR-GSTVYSSHERQVWVQKSGSAS 17
              +NGSHRH+GRRG    +KD DSS   SEGK  +R G++ Y SHE+QVWVQKS S S
Sbjct: 459  SVDNGSHRHIGRRGPTH-VKD-DSSPVMSEGKPLRRGGASGYGSHEKQVWVQKSSSGS 514


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
            gi|557533707|gb|ESR44825.1| hypothetical protein
            CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  398 bits (1022), Expect = e-108
 Identities = 257/538 (47%), Positives = 325/538 (60%), Gaps = 9/538 (1%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  FR GK SQK Q  +RAY++FK+PEDV+EFAEFF GH+FVNEKG QFK +VEYAPSQ
Sbjct: 37   NWVSFRQGKTSQKHQSCARAYLDFKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK W KKDGREGT+ KDPEY+EFLE +SKP E+LPSAEIQLER+EAERAGA KEA I+
Sbjct: 97   RVPKQWSKKDGREGTLLKDPEYLEFLEFISKPVENLPSAEIQLERREAERAGAAKEALIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRL--GVXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMDFVR+KRAAK G ++L  NGK+S+R             +KRGSD++K +T+ YVL+
Sbjct: 157  TPLMDFVRQKRAAKAGPRRLLSNGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLR 216

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVES--GKTRFV 896
            D+ K    KDK TYIL+ +++DQ    DK V+  S    E V +E G    S  GK + +
Sbjct: 217  DTAKNSSGKDKSTYILVPKRDDQ--DFDKPVSSSSATGSEVVLEESGVPANSDGGKKKVL 274

Query: 895  LLKGKERESSDAPRVLAQHQ--IVASPVKGSPIFSSKKNQTSGRIIKSI-LTKEGRMDFS 725
            LLKGKERE S     ++  Q   V + +    +  +++ + SGRII+ I L K+ R + +
Sbjct: 275  LLKGKEREISQVSGSVSHQQSASVKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQA 334

Query: 724  FINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVD 548
              +  H+EQ  Q++N+E DK P RP    L  KD          VSDD       K  V+
Sbjct: 335  --SGLHSEQ--QISNLEKDKRPPRPSHVQLVMKD-------TNGVSDD-------KVIVN 376

Query: 547  NKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQ 368
            + H    SEK ERRTRNKDRPDR  W  LRR D S  +D             S   S SQ
Sbjct: 377  DLH----SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSD------------ESLSSSASQ 419

Query: 367  QAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYS 188
             ++  V   E           NL          G+ K DLS   RS ++K  GG R  +S
Sbjct: 420  LSLSAVDSSE----------GNL----------GDGKFDLS-NMRSGEVKAVGGGRSSHS 458

Query: 187  GAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKR-GSTVYSSHERQVWVQKSGSAS 17
              +NGSHRH+GRRG    +KD D S   SEGK  +R G++ Y SHE+QVWVQKS S S
Sbjct: 459  SVDNGSHRHIGRRGPTH-VKD-DGSPVMSEGKPLRRGGASGYGSHEKQVWVQKSSSGS 514


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
            gi|550312328|gb|ERP48419.1| hypothetical protein
            POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score =  387 bits (995), Expect = e-105
 Identities = 237/534 (44%), Positives = 321/534 (60%), Gaps = 5/534 (0%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  +RPGK+SQK Q  SRAYI+FKRP+DV++FAEFF GH+FVNEKG QFKA+VEYAPSQ
Sbjct: 38   NWLSYRPGKSSQKHQSCSRAYIDFKRPDDVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQ 97

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
             VPK W KKDGREGTI KDPEY+EFLE ++KP E+LPSAEIQLER+EAERAG  K+API+
Sbjct: 98   HVPKQWSKKDGREGTILKDPEYLEFLEFIAKPVENLPSAEIQLERREAERAGVAKDAPIV 157

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGVXXXXXXXXAKRGSDRRKVATSNYVLKDS 1064
            TPLM+F+R+KRAAK+G +++  NGK S+R G         +KRGS++++ +T+ YVL+D+
Sbjct: 158  TPLMEFIRQKRAAKSGPRRILSNGKPSRRAGGSGSPSSSSSKRGSEKKRASTTMYVLRDT 217

Query: 1063 MKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLLKG 884
            +K    K+K  Y  + + +D+  +   ++   S  E    E        +GK + +LLKG
Sbjct: 218  VKGTSGKEKSIYAQVPKLDDRQLSKAVTLGSGSGTEVSEEETAVSGITGTGKKKILLLKG 277

Query: 883  KERESSDAPRVLAQHQIVASPVKGSPIFSSKKNQTSGRIIKSI-LTKEGRMDFSFINTTH 707
            KE+E S    +    + + S    S    S+++++SGR+IKSI L K+ R   S  +   
Sbjct: 278  KEKEISLQQSISPSDRNIIS----STALKSQRHESSGRVIKSILLNKDSRRIQS--SGVQ 331

Query: 706  TEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSV 530
            +E QMQ +N+E DK P RPP A L  KD        A+ + DDK        V N     
Sbjct: 332  SEPQMQTSNLEKDKRPPRPPHA-LVLKD--------ANGTPDDK-------VVGNDLHGF 375

Query: 529  SSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSA--NSSEGLSVSQQAVG 356
             +EK ERRTRNKDRPDR VW  LRR + S ++D    E +  SA  ++  G   SQ   G
Sbjct: 376  PNEKQERRTRNKDRPDRVVWT-LRRSEGSYASD----ESLSSSAYLSTQSGFDSSQVNHG 430

Query: 355  KVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSGAEN 176
             V+ D + +                               RS ++K  G  R ++S  +N
Sbjct: 431  DVKADTLNL-------------------------------RSGEVKALGSGRSNHSSLDN 459

Query: 175  GSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKR-GSTVYSSHERQVWVQKSGSAS 17
            GSH+H GRRG    ++D D S    EGK+ KR G++ Y SHE+QVWVQKS S S
Sbjct: 460  GSHKHSGRRGPPHPVRDADGS--TVEGKSLKRGGASGYGSHEKQVWVQKSSSGS 511


>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X2 [Solanum tuberosum]
            gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X3 [Solanum
            tuberosum]
          Length = 508

 Score =  384 bits (985), Expect = e-104
 Identities = 249/538 (46%), Positives = 320/538 (59%), Gaps = 9/538 (1%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +WF FRP K S K Q +S+AYI+F+  EDV EFAEFF GH+FVNEKG QFK +VEYAPSQ
Sbjct: 35   NWFTFRPAKTSLKHQSYSKAYIDFRNMEDVTEFAEFFDGHMFVNEKGTQFKTIVEYAPSQ 94

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK WLKKD REGTI KDP YMEFLE ++KP E+LPSAEIQLERKEAERAG+ K+API+
Sbjct: 95   RVPKHWLKKDAREGTILKDPAYMEFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIV 154

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG--VXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMD+VR+KRA K+G+++   NGK SK +G           ++RGS++R  +T+ YV +
Sbjct: 155  TPLMDYVRQKRAVKSGARRSISNGKSSKSVGGTSSRSPSSTASRRGSEKR-TSTTMYVQR 213

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGV--ESGKTRFV 896
            DS K    KDK +YIL+ ++ DQ  +     + P + E + VE E G  V  +SGK + +
Sbjct: 214  DSSKAGNSKDK-SYILLPKRGDQQLSVKSGSSAPGS-EIDVVEGEIGRSVTADSGKKKIL 271

Query: 895  LLKGKERESSDAPRVLAQHQIVASPVKGSPIFSS-KKNQ---TSGRIIKSILTKEGRMDF 728
            LLKGKE+E  +        Q V+S +K SP  S+ K+NQ    SGRII+SIL K+ R + 
Sbjct: 272  LLKGKEKEGPNVSGGSLAQQNVSSALKNSPSLSALKQNQRQEASGRIIRSILLKDARQNQ 331

Query: 727  SFINTTHTEQQMQVANVEDKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVD 548
            S   +   +        +D  P RPPS  L  KD         S +++DK        V 
Sbjct: 332  SAFQSDQIQD-------KDMRPPRPPSMQLFQKD--------TSGANEDK-------VVG 369

Query: 547  NKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQ 368
            N+   V  EK ERR+RN+DRPDRGVWAPLRR D SQ++          + + S G+  S 
Sbjct: 370  NEKHVVHIEKQERRSRNRDRPDRGVWAPLRRADSSQAS----------NGSLSSGIPQSS 419

Query: 367  QAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYS 188
            Q    VRE                       G GE K DL  A  +E   I  GR   +S
Sbjct: 420  Q----VRE-------------------FVEGGQGELKNDLPIARGTEFRPIGSGRN-SHS 455

Query: 187  GAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGST-VYSSHERQVWVQKSGSAS 17
             A+NG+++H GRRG LR +  T    +  EGK  K+G T  YSS E+QVWVQKS S S
Sbjct: 456  SADNGNYKHGGRRG-LRDVAGT----SIGEGKPVKKGGTSAYSSLEKQVWVQKSSSGS 508


>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  381 bits (979), Expect = e-103
 Identities = 254/540 (47%), Positives = 327/540 (60%), Gaps = 11/540 (2%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  FRPGK+SQK Q +SRAYI+FKR EDV+EFAEFF GH+FVNEKG QFK +VEYAPSQ
Sbjct: 37   NWLSFRPGKSSQKHQSYSRAYIDFKRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK   KKDGREGTI KD EY+EFLE + KP E+LPSAEIQLERKEAERAG  K+ PI+
Sbjct: 97   RVPKRSSKKDGREGTILKDLEYLEFLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG--VXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMDFVR+KRAAK GS++   NGK+S+R G           +KRGS++R+ +T+ YVL+
Sbjct: 157  TPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLR 216

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFG-PGV-ESGKTRFV 896
            DS+K    KDK TYIL+S++++Q   SDK V + S++  E  E+E G PG+ ++ K + +
Sbjct: 217  DSLKNASGKDKSTYILVSKRDEQQ-LSDKHVALASSMGTEISEEESGVPGITDAVKKKVL 275

Query: 895  LLKGKERESSDAPRVLAQHQIVASPVKGSPIFSSKKNQTS---GRIIKSIL-TKEGRMDF 728
            LLKGKE+E S     +   Q V SP+K + + S+   Q S   GR+I+ IL  K+ R + 
Sbjct: 276  LLKGKEKEISPVAGNVLHQQNVTSPIK-TILGSTPTKQNSRREGRMIRGILLNKDARQNQ 334

Query: 727  SFINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAV 551
            S  +   +EQQ++ +N+E D+ P R      +S  H+        V  D    +D K   
Sbjct: 335  S--SGVQSEQQIRTSNLEKDRRPPR------HSHSHL--------VLKDTNTASDDKVVG 378

Query: 550  DNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVS 371
            ++ H    SEK ERR RNKDRPDRGVW  LRR D S ++D             S   S S
Sbjct: 379  NDLH---GSEKPERRCRNKDRPDRGVWT-LRRSDGSYASDE------------SMSSSAS 422

Query: 370  QQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDY 191
            Q A+         I      G+           YG+ K DLS   RS  +K  G  R   
Sbjct: 423  QSAL---------IPLDPLEGT-----------YGDTKVDLSNV-RSVQVKTVGSGR--N 459

Query: 190  SGAENGSH-RHVGRRGSLRSLKDTDSSLNPSEGKNSKRGSTV-YSSHERQVWVQKSGSAS 17
            S  +NGSH +HV RRG++      D S   S+GK  KRG    Y SHE+QVWVQKS S S
Sbjct: 460  SSLDNGSHNKHVSRRGAV-----ADGSSVMSDGKPGKRGCAAGYGSHEKQVWVQKSSSGS 514


>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
            lycopersicum]
          Length = 485

 Score =  375 bits (962), Expect = e-101
 Identities = 226/532 (42%), Positives = 311/532 (58%), Gaps = 3/532 (0%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +WFCF PGK+SQK Q +SRAYI FKRPEDV+EFAEFF GH+FVNEKG QFK +VEYAPSQ
Sbjct: 37   NWFCFLPGKSSQKHQTYSRAYIEFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVP+ W KKDGREGTI KDPEY+EFLE +SKP E+LPSAEIQLERKEAERAG+ K+API+
Sbjct: 97   RVPQHWSKKDGREGTILKDPEYLEFLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG--VXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMD++R+KRAAK+G++K   NG+ ++R             +KR S++R+ +T+ YVL+
Sbjct: 157  TPLMDYIRQKRAAKSGARKSIANGRPTRRASGTSAGSPSSSASKRSSEKRRASTTMYVLR 216

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLL 890
            DS K    KDK TYIL  +++DQ  A     + P ++    VE+E G   + GK + +LL
Sbjct: 217  DSSKAGSGKDK-TYILAPKRDDQQRAEKSGTSAPGSV-ANAVEEETGGAADVGKKKILLL 274

Query: 889  KGKERESSDAPRVLAQHQIVASPVKGSPIFSSKKNQTSGRIIKSILTKEGRMDFSFINTT 710
            K KE+E+                       ++++ + SGRII+SIL K+ R +       
Sbjct: 275  KEKEKENP----------------------NNQRREASGRIIRSILLKDARQN----QAP 308

Query: 709  HTEQQMQVANVEDKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSV 530
               QQ +    +DK P RPPS  L  ++         + +++D      +    + HV V
Sbjct: 309  SASQQEKHRVDKDKKPPRPPSVQLFQRE--------TNGANED------RVLGADLHV-V 353

Query: 529  SSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQAVGKV 350
             +EK E+RTR +DRPDRGVW PLRR D   ++D     +   ++ SSE     + + G+ 
Sbjct: 354  HTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASDE---SLSSSASQSSEVPDFVEGSPGET 410

Query: 349  REDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSGAENGS 170
            +   V     NAR      A   P+G G                     R  +S  +NG+
Sbjct: 411  KHGLV-----NAR-----VAEFRPMGSG---------------------RNSHSSFDNGT 439

Query: 169  HRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGS-TVYSSHERQVWVQKSGSAS 17
            ++H GRRG        D  ++  EGK  +RG  + Y++HE+QVWVQKS S +
Sbjct: 440  YKHGGRRGM------RDDGISVGEGKPLRRGGPSSYNTHEKQVWVQKSSSGT 485


>ref|XP_004141560.1| PREDICTED: uncharacterized protein LOC101208317 [Cucumis sativus]
            gi|449517953|ref|XP_004166008.1| PREDICTED:
            uncharacterized LOC101208317 [Cucumis sativus]
          Length = 506

 Score =  371 bits (952), Expect = e-100
 Identities = 242/541 (44%), Positives = 312/541 (57%), Gaps = 12/541 (2%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  +RPGK SQKDQR++RAYI+F RPEDV EFAEFF GH+FVNEKGAQ+KA+VEYAPSQ
Sbjct: 37   NWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVP+   KKDGREGTI KDP+Y+EFL+L++KPAEHLPSAEIQLERKEAE++GA KE PI+
Sbjct: 97   RVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQ------KLFGNGKVSKRLGVXXXXXXXXAKRGSDRRKVATSN 1082
            TPLM+FVR+KRA ++G+Q      K+   G  S R            KRG +++K     
Sbjct: 157  TPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSR-----KPESNSMKRGMEKKK----- 206

Query: 1081 YVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTR 902
            Y+LKDS+K    +DK  +IL+ R+EDQ SA+  ++ +       G  D        GK +
Sbjct: 207  YILKDSVKNTNRRDKSNFILVPRREDQ-SATSSAIGISDV----GTAD-------FGKKK 254

Query: 901  FVLLKGKERESSDAPRVLAQHQIVASPVKGSPIFSSKKN---QTSGRIIKSILTKEGRMD 731
             +LLKGKER+ S        H   A+    SP  +SK N   +  G +I+SIL       
Sbjct: 255  ILLLKGKERDIS--------HLQSATSSGNSPASASKHNHRREAGGGVIRSILLNNEARH 306

Query: 730  FSFINTTHTEQQMQVANVED-KHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAA 554
                +   + Q++Q+ N ++ K P RP +A   S D      + +    D K+ +D K +
Sbjct: 307  GQSSSVAQSHQKIQILNSDNGKRPPRPTNARSGSNDISSNEPNPSGSEGDGKRASDNKFS 366

Query: 553  VDNKH-VSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLS 377
                H +  +SEK E+R RNKDRPDRGVWAP  R D S S                E  S
Sbjct: 367  KKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVS--------------QLEESS 412

Query: 376  VSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDI-KIHGGRR 200
            V Q                    S+ L +       GE K D+ + SR+ D+  I  GR 
Sbjct: 413  VPQ--------------------SSHLLSDSVEAFRGEMKEDI-HGSRTGDVTTIVSGRN 451

Query: 199  VDYSGAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGSTVYSSHERQVWVQKSGSA 20
               S  ENGS RHVGRRG+   +KD D SLNP+EGK SKRG  V   HE+QVWVQKS S 
Sbjct: 452  ---SSVENGSVRHVGRRGAGHVMKD-DGSLNPNEGKPSKRG--VAGGHEKQVWVQKSSSG 505

Query: 19   S 17
            S
Sbjct: 506  S 506


>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
            tuberosum]
          Length = 483

 Score =  370 bits (950), Expect = e-100
 Identities = 227/532 (42%), Positives = 304/532 (57%), Gaps = 3/532 (0%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +WFCF PGK+SQK Q +SRAYI FK PEDV+EFAEFF GH+FVNEKG QFK +VEYAPSQ
Sbjct: 37   NWFCFLPGKSSQKHQTYSRAYIEFKMPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK W KKDGREGTI KDPEY+EFLE +SKP E+LPSAEIQLERKEAERAG+ K+API+
Sbjct: 97   RVPKHWSKKDGREGTILKDPEYLEFLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG--VXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMD++R+KRAAK+G++K   NG+ ++R             +KR S++R+ +T+ YVL+
Sbjct: 157  TPLMDYIRQKRAAKSGARKSIANGRPTRRTSGTSTGSPSSSASKRSSEKRRASTTMYVLR 216

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLL 890
            DS K    KDK TYIL  +++DQ  A     +   ++    VE+E G   + GK + +LL
Sbjct: 217  DSSKAGSGKDK-TYILAPKRDDQQRAEKSGTSAAGSV-ANAVEEETGGAADVGKKKILLL 274

Query: 889  KGKERESSDAPRVLAQHQIVASPVKGSPIFSSKKNQTSGRIIKSILTKEGRMDFSFINTT 710
            K KE                          ++++ + SGRII+SIL K+ R +       
Sbjct: 275  KEKENP------------------------NNQRREASGRIIRSILLKDARQN----QAP 306

Query: 709  HTEQQMQVANVEDKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSV 530
               QQ +    +DK P RPPS  L  ++         + +++D      K    + H+ V
Sbjct: 307  SASQQDKHRVDKDKKPPRPPSVQLFQRE--------TNGANED------KVLGADLHI-V 351

Query: 529  SSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQAVGKV 350
             +EK E+RTR +DRPDRGVW PLRR D   ++D              E LS S     +V
Sbjct: 352  HTEKQEKRTRIRDRPDRGVWTPLRRSDSLHASD--------------ESLSSSASQSSEV 397

Query: 349  REDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSGAENGS 170
             +           GS            GE K  L+ A R  + +  G  R  YS  +NG+
Sbjct: 398  PD--------FVEGSQ-----------GETKHGLANA-RGAEFRPMGSGRNSYSSFDNGT 437

Query: 169  HRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGS-TVYSSHERQVWVQKSGSAS 17
            ++H GRRG        D  ++  EGK  +RG  + Y +HE+QVWVQKS S +
Sbjct: 438  YKHGGRRGM------RDDGISVGEGKPLRRGGPSSYGTHEKQVWVQKSSSGT 483


>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
            [Solanum tuberosum]
          Length = 482

 Score =  369 bits (947), Expect = 2e-99
 Identities = 239/534 (44%), Positives = 310/534 (58%), Gaps = 5/534 (0%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +WF FRP K S K Q +S+AYI+F+  EDV EFAEFF GH+FVNEKG QFK +VEYAPSQ
Sbjct: 35   NWFTFRPAKTSLKHQSYSKAYIDFRNMEDVTEFAEFFDGHMFVNEKGTQFKTIVEYAPSQ 94

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK WLKKD REGTI KDP YMEFLE ++KP E+LPSAEIQLERKEAERAG+ K+API+
Sbjct: 95   RVPKHWLKKDAREGTILKDPAYMEFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIV 154

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG--VXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMD+VR+KRA K+G+++   NGK SK +G           ++RGS++R  +T+ YV +
Sbjct: 155  TPLMDYVRQKRAVKSGARRSISNGKSSKSVGGTSSRSPSSTASRRGSEKR-TSTTMYVQR 213

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGV--ESGKTRFV 896
            DS K    KDK +YIL+ ++ DQ  +     + P + E + VE E G  V  +SGK + +
Sbjct: 214  DSSKAGNSKDK-SYILLPKRGDQQLSVKSGSSAPGS-EIDVVEGEIGRSVTADSGKKKIL 271

Query: 895  LLKGKERESSDAPRVLAQHQIVASPVKGSPIFSSKKNQTSGRIIKSILTKEGRMDFSFIN 716
            LLKGKE+E                        ++++ + SGRII+SIL K+ R + S   
Sbjct: 272  LLKGKEKEGP----------------------NNQRQEASGRIIRSILLKDARQNQSAFQ 309

Query: 715  TTHTEQQMQVANVEDKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHV 536
            +   +        +D  P RPPS  L  KD         S +++DK        V N+  
Sbjct: 310  SDQIQD-------KDMRPPRPPSMQLFQKD--------TSGANEDK-------VVGNEKH 347

Query: 535  SVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQAVG 356
             V  EK ERR+RN+DRPDRGVWAPLRR D SQ++          + + S G+  S Q   
Sbjct: 348  VVHIEKQERRSRNRDRPDRGVWAPLRRADSSQAS----------NGSLSSGIPQSSQ--- 394

Query: 355  KVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSGAEN 176
             VRE                       G GE K DL  A  +E   I  GR   +S A+N
Sbjct: 395  -VRE-------------------FVEGGQGELKNDLPIARGTEFRPIGSGRN-SHSSADN 433

Query: 175  GSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGST-VYSSHERQVWVQKSGSAS 17
            G+++H GRRG LR +  T    +  EGK  K+G T  YSS E+QVWVQKS S S
Sbjct: 434  GNYKHGGRRG-LRDVAGT----SIGEGKPVKKGGTSAYSSLEKQVWVQKSSSGS 482


>ref|XP_006652316.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Oryza
            brachyantha]
          Length = 512

 Score =  366 bits (940), Expect = 1e-98
 Identities = 240/537 (44%), Positives = 319/537 (59%), Gaps = 8/537 (1%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            DW CFRPG  SQK+ R+SR Y+NFK PEDVVEFAE F GH+FVNEKGAQFKALVEYAPSQ
Sbjct: 44   DWSCFRPGNASQKNHRYSRLYLNFKSPEDVVEFAEVFSGHVFVNEKGAQFKALVEYAPSQ 103

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            +VPKL  KKD R+GTI KDPEY+EFLE +SKPAEHLPSAEIQLERKEAERA A KE P++
Sbjct: 104  QVPKLNSKKDARQGTIMKDPEYLEFLESISKPAEHLPSAEIQLERKEAERAAAGKEPPVV 163

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGVXXXXXXXXAKRGSDRRKV-ATSNYVLKD 1067
            TPLM +VR++RAAK+ +Q+  G+ ++S+++          +KRGS++R+  A++ YVL+D
Sbjct: 164  TPLMVYVRQQRAAKSMAQRS-GSSRLSRKVAGAVTSSPSPSKRGSEKRRTSASTQYVLRD 222

Query: 1066 SMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLLK 887
            + K     +KPTYIL+ +K D+ +  +K+ +  S     G+        E+ K + VLLK
Sbjct: 223  NAK-----EKPTYILVPKK-DEHAQREKNTSGTSDATIGGISGS-AQVAENKKEKIVLLK 275

Query: 886  GKERESSDAPRVLAQHQIVASPVKGSPIFSSKKN---QTSGRIIKSILT-KEGRMDFSFI 719
            G+ R  S+   V  Q Q   +P+K + + SS+++   + SGRIIK+IL+ KEGR     +
Sbjct: 276  GRARVDSNTSDVTTQQQS-GTPMKNAALPSSRQDPRLEGSGRIIKTILSNKEGR----HV 330

Query: 718  NTTHTEQQMQVANVEDKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKH 539
              +  +Q+  +   E K P R P+     KD +        V + +K + D K    + H
Sbjct: 331  VMSQHDQEGHIITAE-KRPPRIPNPRSTVKDQL--------VENAEKGHLDDK----HSH 377

Query: 538  VSVS---SEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQ 368
            +  S   SEK ER  RN+DRPDRGVWAP RR D+S S             +S    S  Q
Sbjct: 378  LHGSGPISEKTERHARNRDRPDRGVWAP-RRYDKSVSG----------GTHSPSEFSAMQ 426

Query: 367  QAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYS 188
            Q  G+                   + H    G+GERK D          + HGG R    
Sbjct: 427  QLSGEN-----------------FSQHAD--GHGERKIDP---------RGHGGIR---G 455

Query: 187  GAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGSTVYSSHERQVWVQKSGSAS 17
            G     H+H  RRG  R LK+ + S + S+GK SKRGS  Y +HERQVWVQKS SA+
Sbjct: 456  GPVENGHKHANRRGPPRGLKEMEISASTSDGKPSKRGSANYGAHERQVWVQKSSSAT 512


>ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296641 [Fragaria vesca
            subsp. vesca]
          Length = 515

 Score =  364 bits (934), Expect = 7e-98
 Identities = 229/526 (43%), Positives = 305/526 (57%), Gaps = 4/526 (0%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +WFCFRPGKNS K QR+SRAYI FKRPEDV EFAEFF GH+FVNEKG QFK++VEYAPSQ
Sbjct: 37   NWFCFRPGKNSHKHQRYSRAYIEFKRPEDVFEFAEFFDGHVFVNEKGTQFKSIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK   KKDGREGTI KDP+Y+EFL+L++KPAEHLPSAEIQLERKEAE+AGA KEAPI+
Sbjct: 97   RVPKPSNKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQAGAAKEAPIV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGVXXXXXXXXAKRG--SDRRKVATSNYVLK 1070
            TPLM+++R+KRA  +G+Q      KV +R G         +KRG  S +R      Y+LK
Sbjct: 157  TPLMEYIRQKRAVGSGTQISSVVRKVRRRTGA-----ASFSKRGSTSTKRVSEKKKYILK 211

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLL 890
            D+ K    KD+ T+ ++ R+EDQ+++S     + + I   G         +SG+T+ +L 
Sbjct: 212  DTAKYTSRKDRSTFNVLPRREDQLASSSGKDTMGNEI---GSVSGIPVIADSGRTKILL- 267

Query: 889  KGKERESSDAPRVLAQHQ--IVASPVKGSPIFSSKKNQTSGRIIKSILTKEGRMDFSFIN 716
               +RE+  AP  ++QHQ  I +SPV  SP   +++   SGR ++SIL+           
Sbjct: 268  ---KRETPPAPEGISQHQASIGSSPVSASP-KQNQRRDASGRFLRSILSHNEVRQREASA 323

Query: 715  TTHTEQQMQVANVEDKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHV 536
               ++Q++   N + K   RP +A L   +     +S++S  D  +   D     D    
Sbjct: 324  EVQSQQKILGPNSDIKRVPRPSNARLGLNNE---TNSMSSEGDRRRVMVDKFTKKDMHGT 380

Query: 535  SVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQAVG 356
            +  SEK +R TRNKDRPDRGVW PLRR + S               NS E LS S     
Sbjct: 381  TNISEKQDRHTRNKDRPDRGVWTPLRRAESSH--------------NSDEHLSSSASQRP 426

Query: 355  KVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSGAEN 176
            ++  D V                E P  +GE K D SY SR+ ++               
Sbjct: 427  QLLSDSV----------------EVP--HGEVKADTSYGSRTGEV-------------PT 455

Query: 175  GSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGSTVYSSHERQVWV 38
            GS+RH GRRG+  S+KD D SLN SEGK+SKRG+        +V++
Sbjct: 456  GSNRHFGRRGTASSMKD-DGSLNTSEGKSSKRGAAAAVHGAPEVYI 500


>ref|XP_006441553.1| hypothetical protein CICLE_v10019695mg [Citrus clementina]
            gi|567898132|ref|XP_006441554.1| hypothetical protein
            CICLE_v10019695mg [Citrus clementina]
            gi|567898134|ref|XP_006441555.1| hypothetical protein
            CICLE_v10019695mg [Citrus clementina]
            gi|557543815|gb|ESR54793.1| hypothetical protein
            CICLE_v10019695mg [Citrus clementina]
            gi|557543816|gb|ESR54794.1| hypothetical protein
            CICLE_v10019695mg [Citrus clementina]
            gi|557543817|gb|ESR54795.1| hypothetical protein
            CICLE_v10019695mg [Citrus clementina]
          Length = 523

 Score =  362 bits (930), Expect = 2e-97
 Identities = 236/539 (43%), Positives = 315/539 (58%), Gaps = 12/539 (2%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +WFCFRPGK+S K QR+SRAY+  K+P DV EFAE   GH+FVNEKGAQFKA+VEYAPSQ
Sbjct: 37   NWFCFRPGKSSYKHQRYSRAYVELKKPADVFEFAELLNGHVFVNEKGAQFKAIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK + +KD REGTI KDP+Y+EFL++++KPAE+LPSAEIQLERKEAE +GA KE  ++
Sbjct: 97   RVPKPFSRKDSREGTIFKDPDYLEFLKVIAKPAENLPSAEIQLERKEAELSGAPKETLVV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSK--RLGVXXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLM++VR+KRAA++G+Q+    G+V +  R            KRGS+++K     Y+LK
Sbjct: 157  TPLMEYVRQKRAAESGAQESLAVGRVGRRSRAASASKTSSTTTKRGSEKKK-----YILK 211

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQ-MSASDKSVNVPSTIEKEGVEDEFGPGV--ESGKTRF 899
            DS K    KDK T+ +++++EDQ  S+S K  +   TI   GVE   G  +  ++GK + 
Sbjct: 212  DSAKNARRKDKSTFTVVAKREDQPASSSGKETSASETI--CGVEGSVGIPLTSDTGKKKI 269

Query: 898  VLLKGKERESSDAPRVLAQHQIVASPVK--GSPIFSS--KKNQTSGRIIKSILTKEGRMD 731
            +LLKGKERE    P  L   Q  +SPVK   SP      ++ +  GR+I+ IL       
Sbjct: 270  LLLKGKEREIPHVPDALLDKQRESSPVKNSASPTVPKQIQRREAGGRLIRKILLNNETRQ 329

Query: 730  FSFINTTHTEQQMQVANVEDKHPSRPPSASLNSKDHIP-CISSLASVSDDDKKYTDGKAA 554
               +     +Q+MQ  N E+  P   P++S N   H+    SS+ S   + K+ +D + A
Sbjct: 330  TQSVTGVQPQQKMQNLNQENGKPLPGPTSSPNG--HVTNNDSSIFSFDGNTKRSSDDRFA 387

Query: 553  VDNKHVS-VSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLS 377
                H S   SEK E+RTRNKDRPDR VW P RR D SQ+N               E LS
Sbjct: 388  RKVLHGSGAVSEKQEKRTRNKDRPDRVVWTP-RRSDVSQAN--------------GERLS 432

Query: 376  VSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRV 197
             SQ    ++  D V + TR                 GE K D+SY S++ DI        
Sbjct: 433  SSQPT--QLLSDSVEV-TR-----------------GEMKDDMSYGSKTVDIA------- 465

Query: 196  DYSGAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSK-RGSTVYSSHERQVWVQKSGS 23
              +    GSHRH GRR +    KD D  +N  EGK+SK RG+     +E+QVW+QKS S
Sbjct: 466  --APTSGGSHRHNGRRAATNITKD-DGCINMIEGKSSKRRGAAGSGGNEKQVWIQKSSS 521


>gb|AFW58318.1| hypothetical protein ZEAMMB73_385077 [Zea mays]
          Length = 503

 Score =  362 bits (928), Expect = 3e-97
 Identities = 236/535 (44%), Positives = 310/535 (57%), Gaps = 6/535 (1%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            DW CFRPG  SQK+ RHSR Y+NFKRPEDVVEFAE F GH+FVNEKGAQFKA VEYAPSQ
Sbjct: 37   DWACFRPGNASQKNHRHSRLYLNFKRPEDVVEFAEVFNGHVFVNEKGAQFKAFVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            +VPK  +KKDGREGTI KDPEY+EFLE +SKP EHLPSAEIQLERKEAERA A KEAP++
Sbjct: 97   QVPKSTIKKDGREGTIMKDPEYLEFLEFISKPTEHLPSAEIQLERKEAERAAAGKEAPVV 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGVXXXXXXXXAKRGSDRRKVATSNYVLKDS 1064
            TPLM +VR++RAAK+   +     ++S++L           KR S++R+  +S YV++D+
Sbjct: 157  TPLMMYVRQQRAAKSMVHR--PGSRLSRKLA--SVVSSSSPKRSSEKRR--SSTYVVRDN 210

Query: 1063 MKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLLKG 884
             K     +KPTYI++ ++E+  +  +K V   S     G     G   E  + + V+LKG
Sbjct: 211  TK-----EKPTYIMVPKREEH-TQREKDVAGNSGDATSGGTSGSGQVAEFKRDKIVILKG 264

Query: 883  KERESSDAPRVLAQHQIVASPVKGSPIFSSKKNQ---TSGRIIKSILT-KEGRMDFSFIN 716
            + R  S+ P    QH   ++P+K  P   S+++Q    SG+IIK+IL+ KE R      N
Sbjct: 265  RGRIDSNTPNGATQHS--STPIKNVPPSRSRQDQRLEASGKIIKTILSNKEARSS----N 318

Query: 715  TTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKH 539
             +  EQ+  + N E DK P R  +     KD +        V + ++ + D KA  ++ H
Sbjct: 319  PSEHEQEGHMFNTEKDKRPPRAFNPRTIVKDQV--------VENAERSHFDEKA--NHLH 368

Query: 538  VSVS-SEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQA 362
             SV   EK ER  RN+DRPDRGVWA  RR D+S S     P       +SSE        
Sbjct: 369  GSVPIGEKVERHARNRDRPDRGVWAA-RRYDKSTSAGSSHP-------SSSE-------- 412

Query: 361  VGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSGA 182
                       Q ++  G N+L   +   G+G+RK D      S  + +  G        
Sbjct: 413  ---------FPQMQSHSGDNILQLAD---GHGDRKTDTRGQGGSRGVPVENG-------- 452

Query: 181  ENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGSTVYSSHERQVWVQKSGSAS 17
                HRH  RRG  R  K+T+ S +  + KNSKRGS  Y +HERQVWVQKS S S
Sbjct: 453  ----HRHANRRGLPRGPKETEISASVPDAKNSKRGSASYGAHERQVWVQKSSSGS 503


>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Cicer arietinum] gi|502076758|ref|XP_004485449.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X3 [Cicer arietinum]
            gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X4 [Cicer
            arietinum]
          Length = 510

 Score =  361 bits (926), Expect = 6e-97
 Identities = 231/544 (42%), Positives = 318/544 (58%), Gaps = 15/544 (2%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  FRP K S K    SRAYI+F +PEDV+EFAEFF GH+FVNEKG QFK  VEYAPSQ
Sbjct: 34   NWLSFRPAKISPKHTSFSRAYIDFNKPEDVIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQ 93

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVPK W KKDGR+GTI KDPEY+EFLEL++KP E+LPSAEIQLE++EAER+GA K+ PI+
Sbjct: 94   RVPKQWSKKDGRDGTIYKDPEYLEFLELLAKPVENLPSAEIQLEKREAERSGAGKDVPIV 153

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGV--XXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMDFVR+KRAAK G ++L  NGKV++R G           ++RGS R++V+T+ YV +
Sbjct: 154  TPLMDFVRQKRAAK-GPRRLSSNGKVTRRTGTPSNGSSSSAPSRRGSARKRVSTTMYVAR 212

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLL 890
            D  K    KDK TYIL+ R+ DQ   S+KS N+ S+      ++    G      + +LL
Sbjct: 213  DPGKNSTVKDKSTYILVPRQGDQ-HLSNKSSNIASSDGNPTFDENGIAGSNDAGKKVLLL 271

Query: 889  KGKERE---SSDAPRVLAQHQIVASP---VKGSPIFSSKKNQTSGRIIKSILT-KEGRMD 731
            KGKERE   +SD+  +   H I +S    +  + +  +++++ SGRIIKSIL+ K+ R +
Sbjct: 272  KGKEREIITASDSDSMSQHHSITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQN 331

Query: 730  FSFINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAA 554
             S  +  ++E+Q+Q +N+E +K P+RP         H+  I           K TDG  A
Sbjct: 332  QS--SRAYSERQLQTSNLEKEKQPTRPL--------HVQLI----------LKGTDG--A 369

Query: 553  VDNK----HVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSE 386
             +N+     + VSSE+ ERR R KDRPDRG+W       RS   D           +  E
Sbjct: 370  PENRITVHGLHVSSERQERRFRQKDRPDRGIWT-----SRSNGGDESLSSSASSQVDPLE 424

Query: 385  GLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGG 206
            G                                    G+ E K D + ++RS ++K  G 
Sbjct: 425  G------------------------------------GHAELKHD-TRSARSGEVKSFGS 447

Query: 205  RRVDYSGAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKR-GSTVYSSHERQVWVQKS 29
             R  +S +ENG ++H GRRG +  +KD D     SEGK+ ++  S+ Y S+E+QVWVQK+
Sbjct: 448  LRASHS-SENGFNKHFGRRGPIHGVKDVDGYSVSSEGKHPRKPSSSAYGSNEKQVWVQKA 506

Query: 28   GSAS 17
             S +
Sbjct: 507  SSGT 510


>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Glycine max] gi|571524272|ref|XP_006598795.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like isoform X2
            [Glycine max]
          Length = 512

 Score =  360 bits (923), Expect = 1e-96
 Identities = 234/544 (43%), Positives = 316/544 (58%), Gaps = 15/544 (2%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            +W  FRPGK SQK   +SRAYI+FKRPEDV+ FAEFF GH+FVNEKG+QFK +VEYAPSQ
Sbjct: 37   NWLSFRPGKISQKHISYSRAYIDFKRPEDVILFAEFFNGHVFVNEKGSQFKVIVEYAPSQ 96

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            RVP+ W KKDGR+GTI KD EY+EFLEL++KP E+LPSAEIQLE++EAER+GA K+ PII
Sbjct: 97   RVPRQWSKKDGRDGTIYKDSEYLEFLELLAKPVENLPSAEIQLEKREAERSGAAKDIPII 156

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGV--XXXXXXXXAKRGSDRRKVATSNYVLK 1070
            TPLMDFVR+KRAAK G ++L  NGKVS+R G           ++RGS +++V+ + YV +
Sbjct: 157  TPLMDFVRQKRAAK-GPRRLLSNGKVSQRAGTSSNGSPSSVTSRRGSGKKRVSATMYVAR 215

Query: 1069 DSMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPS-----TIEKEGVEDEFGPGVESGKT 905
            D  K    KDK T +    K+     SDK+ N+ S     T+++ GV        ++GK 
Sbjct: 216  DPGKNSTIKDKSTLV---PKQGDQHLSDKASNMASSDANLTLDENGVSGNH----DAGKK 268

Query: 904  RFVLLKGKERE---SSDAPRVLAQHQIVASP--VKGSPIF-SSKKNQTSGRIIKSILTKE 743
            + +LLKGKERE    SD   +   H + +S   + GS +   S++++ SGRII+SIL+K+
Sbjct: 269  KVLLLKGKEREIITVSDLDSMSQHHNVTSSAKMIVGSTVLKQSQRHEGSGRIIRSILSKK 328

Query: 742  GRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTD 566
              +  S  +   +EQQ+Q +N+E +K P RP    L              +        +
Sbjct: 329  -ELRQSQYSRALSEQQIQTSNLEKEKQPPRPLHVQL--------------ILKGSNGTPE 373

Query: 565  GKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSE 386
             K  V + H  VSSE+ ER  R+KDRPDRGVW        S+SN           A+ S 
Sbjct: 374  NKIGVHDSH--VSSERQERHVRHKDRPDRGVWT-------SRSN----------GADDSF 414

Query: 385  GLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGG 206
              S S              Q     GS+    H+TP             +RS ++K  G 
Sbjct: 415  SSSASS-------------QVDPLEGSHADLKHDTP------------NARSGEVKSLGS 449

Query: 205  RRVDYSGAENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGST-VYSSHERQVWVQKS 29
             R  +S +ENG ++H GRRG    +KD D     SEGK+ +R ST  Y S+E+QVWVQK+
Sbjct: 450  VRTSHS-SENGFNKHFGRRGPSHGVKDVDGYSVSSEGKHPRRSSTSAYGSNEKQVWVQKA 508

Query: 28   GSAS 17
             S +
Sbjct: 509  SSGT 512


>emb|CAH66847.1| H0525C06.10 [Oryza sativa Indica Group] gi|218194905|gb|EEC77332.1|
            hypothetical protein OsI_16007 [Oryza sativa Indica
            Group] gi|222628924|gb|EEE61056.1| hypothetical protein
            OsJ_14914 [Oryza sativa Japonica Group]
          Length = 507

 Score =  358 bits (919), Expect = 4e-96
 Identities = 240/535 (44%), Positives = 316/535 (59%), Gaps = 6/535 (1%)
 Frame = -3

Query: 1603 DWFCFRPGKNSQKDQRHSRAYINFKRPEDVVEFAEFFGGHIFVNEKGAQFKALVEYAPSQ 1424
            DW CFRPG  SQK+ R+SR Y+NFK PEDVVEFAE F GH+FVNEKGAQFKALVEYAPSQ
Sbjct: 44   DWSCFRPGNASQKNHRYSRLYLNFKGPEDVVEFAEVFNGHVFVNEKGAQFKALVEYAPSQ 103

Query: 1423 RVPKLWLKKDGREGTISKDPEYMEFLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPII 1244
            +VPK   KKD R+GTI KDPEY+EFLE +SKPAEHLPSAEIQLERKEAERA A KE P++
Sbjct: 104  QVPKSNTKKDARQGTIMKDPEYLEFLESISKPAEHLPSAEIQLERKEAERAAAGKEPPVV 163

Query: 1243 TPLMDFVRRKRAAKNGSQKLFGNGKVSKRLGVXXXXXXXXAKRGSDRRKV-ATSNYVLKD 1067
            TPLM +VR++RAAK+ +Q+  G+ ++S+++          +KRGS++R+  A++ YVL++
Sbjct: 164  TPLMVYVRQQRAAKSMAQR-SGSSRLSRKVAGVVTSSPSPSKRGSEKRRTSASTQYVLRE 222

Query: 1066 SMKKRGPKDKPTYILMSRKEDQMSASDKSVNVPSTIEKEGVEDEFGPGVESGKTRFVLLK 887
            +      K+KPTYIL+  K D+ +  +K            V        E+ K + VLLK
Sbjct: 223  N-----AKEKPTYILVP-KRDEHAQREKDATSGGISGSAHV-------AENKKEKIVLLK 269

Query: 886  GKERESSDAPRVLAQHQIVASPVKGSPIFSSKKN---QTSGRIIKSILT-KEGRMDFSFI 719
            G+ R  S+   V +Q Q   +P+K +   SS+++   + SGRIIK+IL+ KEGR     +
Sbjct: 270  GRARVDSNTSDVTSQQQ-SGTPMKNAAQSSSRQDPRLEGSGRIIKTILSNKEGR----HV 324

Query: 718  NTTHTEQQMQVANVEDKHPSRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKH 539
             T+  +Q+  +   E K P R P+     KD +        V + +K + D K +  + H
Sbjct: 325  VTSQHDQEGHIITAE-KRPPRIPNPRSVVKDQV--------VENAEKNHLDDKHS--HLH 373

Query: 538  VS-VSSEKHERRTRNKDRPDRGVWAPLRRPDRSQSNDRIPPEVVQPSANSSEGLSVSQQA 362
             S + SEK ER  RN+DRPDRGVWAP RR D+S S           + +SS   S  QQ 
Sbjct: 374  GSGLISEKTERHARNRDRPDRGVWAP-RRYDKSASGG---------THSSSSEFSPMQQH 423

Query: 361  VGKVREDEVVIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKIHGGRRVDYSGA 182
             G     E   Q  +              G+GERK          D + HGG R    G 
Sbjct: 424  SG-----ENFCQQAD--------------GHGERK---------IDPRGHGGIR---GGP 452

Query: 181  ENGSHRHVGRRGSLRSLKDTDSSLNPSEGKNSKRGSTVYSSHERQVWVQKSGSAS 17
                HRH  RRG  R LK+ + S + S+GK SKR S  Y +HERQVWVQKS SA+
Sbjct: 453  VENGHRHANRRGPPRGLKEMEISASTSDGKPSKRASANYGAHERQVWVQKSSSAT 507