BLASTX nr result
ID: Zingiber23_contig00029112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00029112
(651 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 79 1e-12
emb|CBI38293.3| unnamed protein product [Vitis vinifera] 79 1e-12
emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera] 79 1e-12
emb|CBI20097.3| unnamed protein product [Vitis vinifera] 79 2e-12
ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 79 2e-12
emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera] 79 2e-12
gb|EXB24277.1| Ubiquitin carboxyl-terminal hydrolase 23 [Morus n... 74 4e-11
gb|EOY29564.1| Ubiquitin carboxyl-terminal hydrolase, putative [... 74 5e-11
ref|XP_006473993.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 73 6e-11
ref|XP_006453628.1| hypothetical protein CICLE_v10007375mg [Citr... 73 6e-11
ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis ... 71 3e-10
ref|XP_006279994.1| hypothetical protein CARUB_v10025864mg [Caps... 70 4e-10
dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana] 69 2e-09
gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabido... 69 2e-09
ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabi... 69 2e-09
ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 69 2e-09
ref|XP_004288715.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 68 2e-09
gb|EMJ05192.1| hypothetical protein PRUPE_ppa000932mg [Prunus pe... 68 2e-09
ref|XP_006857223.1| hypothetical protein AMTR_s00065p00205690 [A... 67 3e-09
ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca... 67 3e-09
>ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 997
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/85 (52%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 401 ALFHRRIEFHPNRKPLSSFPNGD--FRLETLNPSSGPGTSAEKIGGVSMPSKGNRSVESE 574
+LFHRRI+FH RKP S F NG FRLETLNP++ P S G + S G + S+
Sbjct: 29 SLFHRRIDFHLTRKPYSGFTNGSGGFRLETLNPTTDPKRSGHSTGPAA--SSGKKQDGSD 86
Query: 575 FYEFGFDQELSCRITFRRIGAGLAN 649
E G D ELS IT RRIGAGL N
Sbjct: 87 HVENGLDPELSIGITVRRIGAGLEN 111
>emb|CBI38293.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/85 (52%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 401 ALFHRRIEFHPNRKPLSSFPNGD--FRLETLNPSSGPGTSAEKIGGVSMPSKGNRSVESE 574
+LFHRRI+FH RKP S F NG FRLETLNP++ P S G + S G + S+
Sbjct: 29 SLFHRRIDFHLTRKPYSGFTNGSGGFRLETLNPTTDPKRSGHSTGPAA--SSGKKQDGSD 86
Query: 575 FYEFGFDQELSCRITFRRIGAGLAN 649
E G D ELS IT RRIGAGL N
Sbjct: 87 HVENGLDPELSIGITVRRIGAGLEN 111
>emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
Length = 1142
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/85 (52%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 401 ALFHRRIEFHPNRKPLSSFPNGD--FRLETLNPSSGPGTSAEKIGGVSMPSKGNRSVESE 574
+LFHRRI+FH RKP S F NG FRLETLNP++ P S G + S G + S+
Sbjct: 29 SLFHRRIDFHLTRKPYSGFTNGSGGFRLETLNPTTDPKRSGHSTGPAA--SSGKKQDGSD 86
Query: 575 FYEFGFDQELSCRITFRRIGAGLAN 649
E G D ELS IT RRIGAGL N
Sbjct: 87 HVENGLDPELSIGITVRRIGAGLEN 111
>emb|CBI20097.3| unnamed protein product [Vitis vinifera]
Length = 915
Score = 78.6 bits (192), Expect = 2e-12
Identities = 45/85 (52%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 401 ALFHRRIEFHPNRKPLSSFPNGD--FRLETLNPSSGPGTSAEKIGGVSMPSKGNRSVESE 574
+ FHRRIEFH RKP S F NG FRLETLNP++ P G + S G + S+
Sbjct: 30 SFFHRRIEFHLARKPFSGFTNGGGGFRLETLNPTTDPKRPGHSTGPAA--SSGKKQDGSD 87
Query: 575 FYEFGFDQELSCRITFRRIGAGLAN 649
E G D ELS ITFRRIGAGL N
Sbjct: 88 HVENGLDPELSIGITFRRIGAGLEN 112
>ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 955
Score = 78.6 bits (192), Expect = 2e-12
Identities = 45/85 (52%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 401 ALFHRRIEFHPNRKPLSSFPNGD--FRLETLNPSSGPGTSAEKIGGVSMPSKGNRSVESE 574
+ FHRRIEFH RKP S F NG FRLETLNP++ P G + S G + S+
Sbjct: 30 SFFHRRIEFHLARKPFSGFTNGGGGFRLETLNPTTDPKRPGHSTGPAA--SSGKKQDGSD 87
Query: 575 FYEFGFDQELSCRITFRRIGAGLAN 649
E G D ELS ITFRRIGAGL N
Sbjct: 88 HVENGLDPELSIGITFRRIGAGLEN 112
>emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]
Length = 918
Score = 78.6 bits (192), Expect = 2e-12
Identities = 45/85 (52%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 401 ALFHRRIEFHPNRKPLSSFPNGD--FRLETLNPSSGPGTSAEKIGGVSMPSKGNRSVESE 574
+ FHRRIEFH RKP S F NG FRLETLNP++ P G + S G + S+
Sbjct: 30 SFFHRRIEFHLARKPFSGFTNGGGGFRLETLNPTTDPKRPGHSTGPAA--SSGKKQDGSD 87
Query: 575 FYEFGFDQELSCRITFRRIGAGLAN 649
E G D ELS ITFRRIGAGL N
Sbjct: 88 HVENGLDPELSIGITFRRIGAGLEN 112
>gb|EXB24277.1| Ubiquitin carboxyl-terminal hydrolase 23 [Morus notabilis]
Length = 931
Score = 73.9 bits (180), Expect = 4e-11
Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +2
Query: 356 AMAEGASIS-VTAQLEALFHRRIEFHPNRKPLSSFPNGDFRLETLNPSSGPGTSAEKIGG 532
A ++G S++ + +LF RR+EFHP RKP GDF +ETLNP + + G
Sbjct: 13 ASSKGFSVADAMSGSSSLFQRRVEFHPARKPKGFSNGGDFHIETLNPGTRSDSGRAGFGA 72
Query: 533 VSMPSKGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
G + SE E G D ELS ITFRRIGAGL N
Sbjct: 73 GQSGYGGKKVAGSEGSESGLDPELSFGITFRRIGAGLEN 111
>gb|EOY29564.1| Ubiquitin carboxyl-terminal hydrolase, putative [Theobroma cacao]
Length = 970
Score = 73.6 bits (179), Expect = 5e-11
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Frame = +2
Query: 359 MAEGASISVTAQLEALFHRRIEFHPNRKPLSSFPN---GDFRLETLNPSSGPGTSAEKIG 529
+ +G S ++ LF +IEFHP RKP + F + GDFR+ETLNP P A +G
Sbjct: 23 LGKGTQGSTSSSGGQLFKGKIEFHPARKPFNGFKSCIGGDFRIETLNPGPDP-KRATGMG 81
Query: 530 GVSMPSKGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
G ++ S+ +E G D LS RITFR+IGAGL N
Sbjct: 82 SGQAGVAGRKADGSDMWENGLDPVLSLRITFRKIGAGLEN 121
>ref|XP_006473993.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Citrus
sinensis]
Length = 946
Score = 73.2 bits (178), Expect = 6e-11
Identities = 46/91 (50%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Frame = +2
Query: 413 RRIEFHPNRKPLSSFPNG-----DFRLETLNPSS-------GPGTSAEKIGGVSMPSKGN 556
RRIEFHP RKP S F NG DF+LETLNPSS G G A+K+ G
Sbjct: 27 RRIEFHPARKPFSGFSNGGGDGGDFKLETLNPSSSSDHTRPGSGHQAKKVDG-------- 78
Query: 557 RSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
SE ++ G D ELS TFRRIGAGL N
Sbjct: 79 ----SELWDNGLDPELSFGTTFRRIGAGLEN 105
>ref|XP_006453628.1| hypothetical protein CICLE_v10007375mg [Citrus clementina]
gi|557556854|gb|ESR66868.1| hypothetical protein
CICLE_v10007375mg [Citrus clementina]
Length = 947
Score = 73.2 bits (178), Expect = 6e-11
Identities = 49/108 (45%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Frame = +2
Query: 365 EGASISVTAQLEALFHRRIEFHPNRKPLSSFPNG------DFRLETLNPSS-------GP 505
E S S RRIEFHP RKP S F NG DF+LETLNPSS G
Sbjct: 11 EAISDSGLGSFTMSLQRRIEFHPARKPFSGFSNGGGDDGGDFKLETLNPSSSSDHTKPGS 70
Query: 506 GTSAEKIGGVSMPSKGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
G A+K+ G SE ++ G D ELS TFRRIGAGL N
Sbjct: 71 GHQAKKVDG------------SELWDNGLDPELSFGTTFRRIGAGLEN 106
>ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
gi|297312078|gb|EFH42502.1| ubiquitin-specific protease
23 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 70.9 bits (172), Expect = 3e-10
Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +2
Query: 374 SISVTAQLEALFHRRIEFHPNRKPLSSFPNG--DFRLETLNPSSGPGTSAEKIGGVSMPS 547
S +V + + R+IEFHP RKP + F NG DF++ETLNP SG +S PS
Sbjct: 25 SCAVASSTASAVFRKIEFHPARKPFNGFSNGRSDFKIETLNPCSGNNRV------LSAPS 78
Query: 548 KGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
+ S+ E GFD EL+ ITFR+IGAGL N
Sbjct: 79 V-KKPDGSDLKEHGFDPELTFSITFRKIGAGLQN 111
>ref|XP_006279994.1| hypothetical protein CARUB_v10025864mg [Capsella rubella]
gi|482548698|gb|EOA12892.1| hypothetical protein
CARUB_v10025864mg [Capsella rubella]
Length = 871
Score = 70.5 bits (171), Expect = 4e-10
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +2
Query: 362 AEGASISVTAQLEALFHRRIEFHPNRKPLSSFPNG--DFRLETLNPSSGPGTSAEKIGGV 535
+ S +V + + R+IEFHP RKP + F NG DF++ETLNP S A K +
Sbjct: 20 SSNGSCAVASSTASAVFRKIEFHPARKPFNGFSNGRSDFKIETLNPCS-----ANK--RL 72
Query: 536 SMPSKGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
P + S+ E GFD EL+ ITFR+IGAGL N
Sbjct: 73 LSPPSAKKPEASDLLENGFDPELTFSITFRKIGAGLQN 110
>dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana]
Length = 829
Score = 68.6 bits (166), Expect = 2e-09
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +2
Query: 374 SISVTAQLEALFHRRIEFHPNRKPLSSFPNG--DFRLETLNPSSGPGTSAEKIGGVSMPS 547
S +V + + R+IEFHP RKP + F NG DF++ETLNP S S +++ +S PS
Sbjct: 25 SCAVASSTASAVFRKIEFHPARKPFNGFSNGRSDFKIETLNPCS----SNQRL--LSAPS 78
Query: 548 KGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
+ S+ E GF+ +L+ ITFR+IGAGL N
Sbjct: 79 -AKKPDSSDLLEHGFEPDLTFSITFRKIGAGLQN 111
>gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 68.6 bits (166), Expect = 2e-09
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +2
Query: 374 SISVTAQLEALFHRRIEFHPNRKPLSSFPNG--DFRLETLNPSSGPGTSAEKIGGVSMPS 547
S +V + + R+IEFHP RKP + F NG DF++ETLNP S S +++ +S PS
Sbjct: 25 SCAVASSTASAVFRKIEFHPARKPFNGFSNGRSDFKIETLNPCS----SNQRL--LSAPS 78
Query: 548 KGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
+ S+ E GF+ +L+ ITFR+IGAGL N
Sbjct: 79 -AKKPDSSDLLEHGFEPDLTFSITFRKIGAGLQN 111
>ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal
hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 68.6 bits (166), Expect = 2e-09
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +2
Query: 374 SISVTAQLEALFHRRIEFHPNRKPLSSFPNG--DFRLETLNPSSGPGTSAEKIGGVSMPS 547
S +V + + R+IEFHP RKP + F NG DF++ETLNP S S +++ +S PS
Sbjct: 25 SCAVASSTASAVFRKIEFHPARKPFNGFSNGRSDFKIETLNPCS----SNQRL--LSAPS 78
Query: 548 KGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
+ S+ E GF+ +L+ ITFR+IGAGL N
Sbjct: 79 -AKKPDSSDLLEHGFEPDLTFSITFRKIGAGLQN 111
>ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 855
Score = 68.6 bits (166), Expect = 2e-09
Identities = 40/81 (49%), Positives = 48/81 (59%)
Frame = +2
Query: 407 FHRRIEFHPNRKPLSSFPNGDFRLETLNPSSGPGTSAEKIGGVSMPSKGNRSVESEFYEF 586
F R+IEF P +KP F N DF +ETLNP++ + + S+ S SEF EF
Sbjct: 19 FQRKIEFIPVKKPFKGFSN-DFNIETLNPTTSE--HRQLVSANIQSSQPQPSKNSEFSEF 75
Query: 587 GFDQELSCRITFRRIGAGLAN 649
G D ELS ITFRRIGAGL N
Sbjct: 76 GLDPELSLGITFRRIGAGLWN 96
>ref|XP_004288715.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Fragaria
vesca subsp. vesca]
Length = 946
Score = 68.2 bits (165), Expect = 2e-09
Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Frame = +2
Query: 416 RIEFHPNRKPLSSFPN--GDFRLETLNPSSGPGTSAEK--IGGVSMPSKGN---RSVESE 574
RIEFH RKP F N DFR ETLNP + G+ + + GG G+ +S SE
Sbjct: 28 RIEFHLARKPFKGFNNDGSDFRPETLNPGTSGGSDSRRPGSGGSGQGQSGSGAKKSDGSE 87
Query: 575 FYEFGFDQELSCRITFRRIGAGLAN 649
F E G+D ELS ITFRRIGAGL N
Sbjct: 88 FVENGWDPELSFPITFRRIGAGLIN 112
>gb|EMJ05192.1| hypothetical protein PRUPE_ppa000932mg [Prunus persica]
Length = 956
Score = 68.2 bits (165), Expect = 2e-09
Identities = 42/83 (50%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +2
Query: 413 RRIEFHPNRKPLSSFPNG--DFRLETLNPSSGPGTSAEKIGGVSMPS--KGNRSVESEFY 580
RRIEFH RKP + NG DFRLETLNP + S + + S ++ SEF
Sbjct: 34 RRIEFHLARKPFNGLNNGGGDFRLETLNPGTSSSDSRKLVTSNQGQSGLSAKKTDGSEFL 93
Query: 581 EFGFDQELSCRITFRRIGAGLAN 649
E G D ELS ITFRRIGAGL N
Sbjct: 94 ENGLDPELSFGITFRRIGAGLMN 116
>ref|XP_006857223.1| hypothetical protein AMTR_s00065p00205690 [Amborella trichopoda]
gi|548861306|gb|ERN18690.1| hypothetical protein
AMTR_s00065p00205690 [Amborella trichopoda]
Length = 1059
Score = 67.4 bits (163), Expect = 3e-09
Identities = 39/96 (40%), Positives = 49/96 (51%)
Frame = +2
Query: 362 AEGASISVTAQLEALFHRRIEFHPNRKPLSSFPNGDFRLETLNPSSGPGTSAEKIGGVSM 541
+ G S+ + + LF RRI FHP RK S NGDF LE LNPS + V
Sbjct: 16 SHGDGFSMPSSINPLFQRRIAFHPARKAYSVSSNGDFHLEILNPSVEQQKPVSNMAMV-- 73
Query: 542 PSKGNRSVESEFYEFGFDQELSCRITFRRIGAGLAN 649
P + S+ +E D +L+ I F RIGAGLAN
Sbjct: 74 PPVAKKLENSDHHELSLDPDLNLGIGFHRIGAGLAN 109
>ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 23-like [Cucumis sativus]
Length = 898
Score = 67.4 bits (163), Expect = 3e-09
Identities = 42/86 (48%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +2
Query: 401 ALFHRRIEFHPNRKPLSSFPNG--DFRLETLNPSSGPGTSAEKIGGVSMPS-KGNRSVES 571
+LF +R+E+ P R+ F NG DF L TLNPSS G + V P+ KG + S
Sbjct: 22 SLFQKRVEYVPARRTFKGFDNGGGDFELTTLNPSSSFGQKSGS--NVDHPAQKGKKLDGS 79
Query: 572 EFYEFGFDQELSCRITFRRIGAGLAN 649
E E G D ELS ITFRRIGAGL N
Sbjct: 80 ELLENGLDPELSFEITFRRIGAGLQN 105