BLASTX nr result

ID: Zingiber23_contig00029037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00029037
         (317 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525712.1| double-stranded RNA binding protein, putativ...    59   9e-07
ref|XP_002319708.2| hypothetical protein POPTR_0013s05820g [Popu...    57   2e-06
ref|XP_002319709.1| predicted protein [Populus trichocarpa]            57   2e-06
ref|XP_006443467.1| hypothetical protein CICLE_v10020214mg [Citr...    56   4e-06
ref|XP_006371174.1| hypothetical protein POPTR_0019s05380g [Popu...    56   4e-06
ref|XP_002337003.1| predicted protein [Populus trichocarpa]            56   4e-06

>ref|XP_002525712.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223535012|gb|EEF36695.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 280

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = +1

Query: 1   NTTRYGESHVPTFSATVEIKGKLFQGDAAKTKRQAETNAAKIA 129
           +T  +GESH PTF++TVE+KG+ F G   +TK+QAE NAAK+A
Sbjct: 26  STVTFGESHKPTFASTVEVKGEFFTGQQTRTKKQAEFNAAKVA 68


>ref|XP_002319708.2| hypothetical protein POPTR_0013s05820g [Populus trichocarpa]
           gi|550325051|gb|EEE95631.2| hypothetical protein
           POPTR_0013s05820g [Populus trichocarpa]
          Length = 353

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   NTTRYGESHVPTFSATVEIKGKLFQGDAAKTKRQAETNAAKIA 129
           +T + GE+HVPTF +TVEI+G++F G  AKTK+QAE +AAK A
Sbjct: 108 STNKSGEAHVPTFISTVEIEGEIFTGQGAKTKKQAEMSAAKTA 150


>ref|XP_002319709.1| predicted protein [Populus trichocarpa]
          Length = 240

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   NTTRYGESHVPTFSATVEIKGKLFQGDAAKTKRQAETNAAKIA 129
           +T + GE+HVPTF +TVEI+G++F G  AKTK+QAE +AAK A
Sbjct: 191 STNKSGEAHVPTFISTVEIEGEIFTGQGAKTKKQAEMSAAKTA 233


>ref|XP_006443467.1| hypothetical protein CICLE_v10020214mg [Citrus clementina]
           gi|568850926|ref|XP_006479147.1| PREDICTED:
           double-stranded RNA-binding protein 1-like [Citrus
           sinensis] gi|557545729|gb|ESR56707.1| hypothetical
           protein CICLE_v10020214mg [Citrus clementina]
          Length = 434

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = +1

Query: 1   NTTRYGESHVPTFSATVEIKGKLFQGDAAKTKRQAETNAAKIA 129
           NT + GESH PTF +TVE+ G++F G  AK+K+QAE +AAK+A
Sbjct: 223 NTKQSGESHAPTFVSTVEVGGQVFSGQEAKSKKQAEMSAAKVA 265


>ref|XP_006371174.1| hypothetical protein POPTR_0019s05380g [Populus trichocarpa]
           gi|566232405|ref|XP_006371175.1| hypothetical protein
           POPTR_0019s05380g [Populus trichocarpa]
           gi|550316844|gb|ERP48971.1| hypothetical protein
           POPTR_0019s05380g [Populus trichocarpa]
           gi|550316845|gb|ERP48972.1| hypothetical protein
           POPTR_0019s05380g [Populus trichocarpa]
          Length = 480

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 4   TTRYGESHVPTFSATVEIKGKLFQGDAAKTKRQAETNAAKIA 129
           T + GE+HVPTF + VEI+G++F G  AKTK+QAE +AAKIA
Sbjct: 253 TDKSGEAHVPTFVSKVEIEGEIFTGQGAKTKKQAEMSAAKIA 294


>ref|XP_002337003.1| predicted protein [Populus trichocarpa]
          Length = 330

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 4   TTRYGESHVPTFSATVEIKGKLFQGDAAKTKRQAETNAAKIA 129
           T + GE+HVPTF + VEI+G++F G  AKTK+QAE +AAKIA
Sbjct: 103 TDKSGEAHVPTFVSKVEIEGEIFTGQGAKTKKQAEMSAAKIA 144


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