BLASTX nr result

ID: Zingiber23_contig00028911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00028911
         (442 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004290591.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   105   8e-21
ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH...   105   8e-21
emb|CBI32382.3| unnamed protein product [Vitis vinifera]              105   8e-21
emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]   105   8e-21
gb|EMJ01524.1| hypothetical protein PRUPE_ppa000536mg [Prunus pe...   103   2e-20
ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago...   103   2e-20
ref|XP_006412278.1| hypothetical protein EUTSA_v10024280mg [Eutr...   103   3e-20
ref|XP_006412277.1| hypothetical protein EUTSA_v10024280mg [Eutr...   103   3e-20
ref|XP_002313128.2| zinc finger family protein [Populus trichoca...   103   3e-20
ref|XP_006283036.1| hypothetical protein CARUB_v10004028mg [Caps...   103   3e-20
ref|XP_002869176.1| protein binding protein [Arabidopsis lyrata ...   103   3e-20
ref|NP_001119113.1| cuticular wax biosynthesis protein [Arabidop...   103   3e-20
ref|NP_195136.3| cuticular wax biosynthesis protein [Arabidopsis...   103   3e-20
emb|CAA17562.1| putative protein [Arabidopsis thaliana] gi|72703...   103   3e-20
ref|XP_006346393.1| PREDICTED: probable E3 ubiquitin ligase SUD1...   102   7e-20
ref|XP_004505248.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   102   7e-20
ref|XP_004505246.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   102   7e-20
ref|XP_004230757.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   102   7e-20
ref|XP_004228772.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   102   7e-20
ref|XP_002298731.2| zinc finger family protein [Populus trichoca...   101   9e-20

>ref|XP_004290591.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Fragaria vesca
           subsp. vesca]
          Length = 1106

 Score =  105 bits (261), Expect = 8e-21
 Identities = 43/48 (89%), Positives = 47/48 (97%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YDDD++E DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 47  KYDDDEEEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 94


>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
          Length = 1195

 Score =  105 bits (261), Expect = 8e-21
 Identities = 42/48 (87%), Positives = 48/48 (100%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YD+++DEGDVCRICRNPGD++NPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 134 KYDEEEDEGDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLN 181


>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  105 bits (261), Expect = 8e-21
 Identities = 42/48 (87%), Positives = 48/48 (100%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YD+++DEGDVCRICRNPGD++NPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 49  KYDEEEDEGDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLN 96


>emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]
          Length = 1177

 Score =  105 bits (261), Expect = 8e-21
 Identities = 42/48 (87%), Positives = 48/48 (100%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YD+++DEGDVCRICRNPGD++NPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 49  KYDEEEDEGDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLN 96


>gb|EMJ01524.1| hypothetical protein PRUPE_ppa000536mg [Prunus persica]
          Length = 1109

 Score =  103 bits (257), Expect = 2e-20
 Identities = 42/48 (87%), Positives = 47/48 (97%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YDD+++E DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 50  KYDDEEEEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 97


>ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago truncatula]
           gi|355508978|gb|AES90120.1| E3 ubiquitin-protein ligase
           MARCH6 [Medicago truncatula]
          Length = 1112

 Score =  103 bits (257), Expect = 2e-20
 Identities = 45/49 (91%), Positives = 47/49 (95%), Gaps = 1/49 (2%)
 Frame = -3

Query: 146 RYDDDD-DEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YDDDD DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 57  KYDDDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 105


>ref|XP_006412278.1| hypothetical protein EUTSA_v10024280mg [Eutrema salsugineum]
           gi|557113448|gb|ESQ53731.1| hypothetical protein
           EUTSA_v10024280mg [Eutrema salsugineum]
          Length = 1080

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DDD+DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 63  DDDEDEEDVCRICRNPGDTDNPLRYPCACSGSIKFVHQDCLLQWLN 108


>ref|XP_006412277.1| hypothetical protein EUTSA_v10024280mg [Eutrema salsugineum]
           gi|557113447|gb|ESQ53730.1| hypothetical protein
           EUTSA_v10024280mg [Eutrema salsugineum]
          Length = 838

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DDD+DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 63  DDDEDEEDVCRICRNPGDTDNPLRYPCACSGSIKFVHQDCLLQWLN 108


>ref|XP_002313128.2| zinc finger family protein [Populus trichocarpa]
           gi|550331441|gb|EEE87083.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 1109

 Score =  103 bits (256), Expect = 3e-20
 Identities = 42/48 (87%), Positives = 47/48 (97%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           R+DDD++E DVCRICRNPGD++NPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 53  RFDDDEEEEDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLN 100


>ref|XP_006283036.1| hypothetical protein CARUB_v10004028mg [Capsella rubella]
           gi|482551741|gb|EOA15934.1| hypothetical protein
           CARUB_v10004028mg [Capsella rubella]
          Length = 1114

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DDD+DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 66  DDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 111


>ref|XP_002869176.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315012|gb|EFH45435.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1108

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DDD+DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 59  DDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 104


>ref|NP_001119113.1| cuticular wax biosynthesis protein [Arabidopsis thaliana]
           gi|332660924|gb|AEE86324.1| cuticular wax biosynthesis
           protein [Arabidopsis thaliana]
          Length = 1107

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DDD+DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 59  DDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 104


>ref|NP_195136.3| cuticular wax biosynthesis protein [Arabidopsis thaliana]
           gi|519889692|sp|F4JKK0.1|SUD1_ARATH RecName:
           Full=Probable E3 ubiquitin ligase SUD1; AltName:
           Full=Protein ECERIFERUM 9; AltName: Full=Protein
           SUPPRESSOR OF DRY2 DEFFECTS 1; Short=AtSUD1; AltName:
           Full=RING/U-box domain-containing protein
           gi|332660923|gb|AEE86323.1| cuticular wax biosynthesis
           protein [Arabidopsis thaliana]
          Length = 1108

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DDD+DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 59  DDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 104


>emb|CAA17562.1| putative protein [Arabidopsis thaliana] gi|7270359|emb|CAB80127.1|
           putative protein [Arabidopsis thaliana]
          Length = 1051

 Score =  103 bits (256), Expect = 3e-20
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DDD+DE DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 59  DDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 104


>ref|XP_006346393.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like [Solanum
           tuberosum]
          Length = 1113

 Score =  102 bits (253), Expect = 7e-20
 Identities = 41/48 (85%), Positives = 47/48 (97%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           R+DDD++E DVCRICRNPG++DNPLRYPCACSGSIK+VHQDCLLQWLN
Sbjct: 59  RFDDDEEEEDVCRICRNPGEADNPLRYPCACSGSIKYVHQDCLLQWLN 106


>ref|XP_004505248.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like isoform X3
           [Cicer arietinum]
          Length = 1103

 Score =  102 bits (253), Expect = 7e-20
 Identities = 44/49 (89%), Positives = 47/49 (95%), Gaps = 1/49 (2%)
 Frame = -3

Query: 146 RYDDDDDEG-DVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YDDDD+E  DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 49  KYDDDDEEEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 97


>ref|XP_004505246.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like isoform X1
           [Cicer arietinum] gi|502143178|ref|XP_004505247.1|
           PREDICTED: E3 ubiquitin-protein ligase MARCH6-like
           isoform X2 [Cicer arietinum]
          Length = 1104

 Score =  102 bits (253), Expect = 7e-20
 Identities = 44/49 (89%), Positives = 47/49 (95%), Gaps = 1/49 (2%)
 Frame = -3

Query: 146 RYDDDDDEG-DVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           +YDDDD+E  DVCRICRNPGD+DNPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 49  KYDDDDEEEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLN 97


>ref|XP_004230757.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Solanum
           lycopersicum]
          Length = 1111

 Score =  102 bits (253), Expect = 7e-20
 Identities = 41/48 (85%), Positives = 47/48 (97%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           R+DDD++E DVCRICRNPG++DNPLRYPCACSGSIK+VHQDCLLQWLN
Sbjct: 59  RFDDDEEEEDVCRICRNPGEADNPLRYPCACSGSIKYVHQDCLLQWLN 106


>ref|XP_004228772.1| PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Solanum
           lycopersicum]
          Length = 125

 Score =  102 bits (253), Expect = 7e-20
 Identities = 41/48 (85%), Positives = 47/48 (97%)
 Frame = -3

Query: 146 RYDDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           R+DDD++E DVCRICRNPG++DNPLRYPCACSGSIK+VHQDCLLQWLN
Sbjct: 59  RFDDDEEEEDVCRICRNPGEADNPLRYPCACSGSIKYVHQDCLLQWLN 106


>ref|XP_002298731.2| zinc finger family protein [Populus trichocarpa]
           gi|550348609|gb|EEE83536.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 1088

 Score =  101 bits (252), Expect = 9e-20
 Identities = 41/46 (89%), Positives = 46/46 (100%)
 Frame = -3

Query: 140 DDDDDEGDVCRICRNPGDSDNPLRYPCACSGSIKFVHQDCLLQWLN 3
           DD+++EGDVCRICRNPGD++NPLRYPCACSGSIKFVHQDCLLQWLN
Sbjct: 50  DDEEEEGDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLN 95