BLASTX nr result
ID: Zingiber23_contig00028812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028812
(1279 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 368 3e-99
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 363 8e-98
dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare] 362 2e-97
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 360 7e-97
gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family prot... 359 1e-96
ref|XP_004953845.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 358 3e-96
ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 356 1e-95
ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [S... 354 4e-95
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 354 5e-95
ref|XP_002312464.2| zinc finger family protein [Populus trichoca... 353 1e-94
ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 352 2e-94
ref|NP_001149757.1| LOC100283384 [Zea mays] gi|195632056|gb|ACG3... 351 3e-94
gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus pe... 348 2e-93
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 348 3e-93
ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citr... 348 3e-93
ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Popu... 347 8e-93
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera] 345 2e-92
gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo] 344 4e-92
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 343 9e-92
ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 342 3e-91
>ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 368 bits (944), Expect = 3e-99
Identities = 189/329 (57%), Positives = 227/329 (68%), Gaps = 4/329 (1%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +++GRAAGRR PSMLVRETAALQLE RRA+WA+SRPVVALD++WN+AFAA + AVL A
Sbjct: 44 LAALIGRAAGRRGPSMLVRETAALQLERRRADWAHSRPVVALDVAWNVAFAAAAAAVLAA 103
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWS---EYXXXXXXXXRDAEHDGRPAPNSGVED 803
+A E P PLRLW+ GYA+QCV HV LV S D E D A N+G +
Sbjct: 104 SAAESPAKPLRLWLVGYALQCVVHVSLVCSGPGRRRRAARARGPDVESD---AANAGPDG 160
Query: 802 SEVVADGDGVGSRQRSFA-KRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTV 626
S D D +RS + +RCES+NT++SFLWWIIGF+W+VS G L Q APRLYWLTV
Sbjct: 161 SGSEDDDDEEAMDERSSSVERCESVNTLVSFLWWIIGFYWVVSGGDMLEQGAPRLYWLTV 220
Query: 625 VFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHAS 446
VFLAFDVFFA+FCV +AC +YA+ GQEGA +ADI VLP+Y Y +
Sbjct: 221 VFLAFDVFFAVFCVAVACFIGVALCCCLPCVVAILYALVGQEGASDADIGVLPRYKYSVA 280
Query: 445 CEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNH 266
ED EK +EG+MIP+ SG ECCICL+ YEDGVEL A+PCNH
Sbjct: 281 NEDVEKGTDEGLMIPILNNSG----ASTSERILLNEDAECCICLSSYEDGVELSALPCNH 336
Query: 265 HFHSSCITKWLRIHATCPLCKYNILKGSD 179
HFHS+CITKWLR+HATCPLCK+NILKGS+
Sbjct: 337 HFHSTCITKWLRMHATCPLCKFNILKGSE 365
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 363 bits (932), Expect = 8e-98
Identities = 186/331 (56%), Positives = 225/331 (67%), Gaps = 6/331 (1%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L ++GRA GRR PSMLVRETAA +LE RRA+W YS+PVVALD+ WN++F VS+ +L
Sbjct: 1975 LALLMGRATGRRGPSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLIC 2034
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPA-PNSGVEDSE 797
TA ERP P+RLWI GYA+QC HV LVW EY RD E +P +S V DSE
Sbjct: 2035 TARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSE 2094
Query: 796 VVADGDG-----VGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWL 632
D DG G Q S KRCES+NT+ SFLWWI+GF+W+VS G+ L+QNAPRLYWL
Sbjct: 2095 ---DEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWL 2151
Query: 631 TVVFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYH 452
VVFLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LP+Y +
Sbjct: 2152 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFE 2211
Query: 451 ASCEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPC 272
A+ E++ G MIP SG L+ ECCICL+ YEDG EL A+PC
Sbjct: 2212 ANNEEKSGVG-AGTMIPTETSSGYLA----NERILLPEDAECCICLSSYEDGAELHALPC 2266
Query: 271 NHHFHSSCITKWLRIHATCPLCKYNILKGSD 179
NHHFHS+CI KWL+++ATCPLCKYNILKGS+
Sbjct: 2267 NHHFHSTCIAKWLKMNATCPLCKYNILKGSE 2297
>dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 362 bits (928), Expect = 2e-97
Identities = 185/326 (56%), Positives = 222/326 (68%), Gaps = 1/326 (0%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +++GRAAGRR PSMLVRETAALQL+ RRA+WA+SRPVVALD++WN+AFAA + AVL A
Sbjct: 46 LAALIGRAAGRRGPSMLVRETAALQLDRRRADWAHSRPVVALDVAWNVAFAAAAAAVLAA 105
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
+ E PG PLRLW+ GYA+QCV HV LV S R + + A +G SE
Sbjct: 106 STAESPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARGPDIES-GAATAGANSSES 164
Query: 793 VADGDGVGSRQR-SFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFL 617
D +R S RCES+NT++SFLWWIIGF+W+V+ G L Q APRLYWLTVVFL
Sbjct: 165 DEGNDEEAMEERASSTDRCESVNTMVSFLWWIIGFYWVVTGGDVLEQGAPRLYWLTVVFL 224
Query: 616 AFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCED 437
AFDVFFA+FCVV+AC +YA+ GQEGA +ADI VLP+Y Y E+
Sbjct: 225 AFDVFFAVFCVVVACFIGVALCCCLPCVVAILYALVGQEGASDADIGVLPRYKYSDPSEN 284
Query: 436 QEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFH 257
EK +EGVMIP+ SG + ECCICL+ YEDGVEL A+PCNHHFH
Sbjct: 285 GEKGTDEGVMIPILNNSGTST----SERILLREDAECCICLSSYEDGVELSALPCNHHFH 340
Query: 256 SSCITKWLRIHATCPLCKYNILKGSD 179
S CITKWLR+HA CPLCKYNILKGS+
Sbjct: 341 SMCITKWLRMHANCPLCKYNILKGSE 366
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 360 bits (924), Expect = 7e-97
Identities = 178/339 (52%), Positives = 222/339 (65%), Gaps = 14/339 (4%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGR GRR PSMLVRETAAL+LE RRA+W YS+PVVALD+ WN AF VS+ +L
Sbjct: 628 LAMLLGRVTGRRGPSMLVRETAALELEERRADWGYSKPVVALDMVWNTAFVVVSITMLIL 687
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAE--------------HD 836
+ E+P P+R+WI GYA+QC+ HV LVW EY RD E H+
Sbjct: 688 SVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSRRVRDEERQQQQQQQAEVEGQHE 747
Query: 835 GRPAPNSGVEDSEVVADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQ 656
N ED + V D V S + S KRCES+NT+ SFLWWI+GF+W+VS G +L+Q
Sbjct: 748 ENEGENVDSEDEDGV-DRASVTSNRSSVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQ 806
Query: 655 NAPRLYWLTVVFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADIS 476
NAP LYWL VVFLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S
Sbjct: 807 NAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLS 866
Query: 475 VLPKYLYHASCEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDG 296
+LPKY + + E+++ + G M+P+ SG L+ ECCICL PYEDG
Sbjct: 867 ILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLA----NERILLPEDAECCICLCPYEDG 922
Query: 295 VELLAMPCNHHFHSSCITKWLRIHATCPLCKYNILKGSD 179
EL +PCNHHFHS+CI KWL+++ATCPLCKYNILKG++
Sbjct: 923 AELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNE 961
>gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family protein isoform 1
[Theobroma cacao]
Length = 360
Score = 359 bits (922), Expect = 1e-96
Identities = 179/328 (54%), Positives = 218/328 (66%), Gaps = 3/328 (0%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR SMLVRETAA +LE RRA+W YS+PVVALD+ WN AF AVSVA+L
Sbjct: 36 LALLLGRATGRRGASMLVRETAARELEERRADWGYSKPVVALDMLWNTAFVAVSVAMLIC 95
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
T ER P+RLWI GYA+QC+ HV LVW EY + + A + DSE
Sbjct: 96 TVDERTNTPIRLWICGYALQCLVHVVLVWLEYRRRNVRRTSARDEERGDATSGDANDSED 155
Query: 793 VADG---DGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVV 623
DG GS Q S KRCES+NT++SFLWWI+GF+W+VS G L+QNAPRLYWL VV
Sbjct: 156 EQDGIERSAFGSNQSSVTKRCESVNTMVSFLWWIVGFYWVVSGGNYLLQNAPRLYWLAVV 215
Query: 622 FLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASC 443
FLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY +
Sbjct: 216 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQIIN 275
Query: 442 EDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHH 263
+ + G M+P+ SG L+ ECCICL+ YEDG +L A+PCNHH
Sbjct: 276 NGGKASVGAGKMVPVETSSGYLA----NERILLPEDAECCICLSSYEDGADLHALPCNHH 331
Query: 262 FHSSCITKWLRIHATCPLCKYNILKGSD 179
FHS+CI KWL+++ATCPLCKYNILKG++
Sbjct: 332 FHSACIVKWLKMNATCPLCKYNILKGNE 359
>ref|XP_004953845.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Setaria italica]
Length = 368
Score = 358 bits (918), Expect = 3e-96
Identities = 180/325 (55%), Positives = 222/325 (68%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +++GRAAGRR PSMLVRETAALQL+ RRA+WA+SRPVVALDI+WN+AFAA + AVL +
Sbjct: 48 LAALIGRAAGRRGPSMLVRETAALQLQRRRADWAHSRPVVALDIAWNVAFAAAAAAVLAS 107
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
+ E P PLRLW+ GYA QC+ HV +V ++ A + +G + S+
Sbjct: 108 STEESPVKPLRLWLVGYAAQCLVHVGIVCADTGRGPARARGSA--SDIESAGAGTDSSDT 165
Query: 793 VADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFLA 614
+ D + S+ RCES+NT++SFLWWIIGF+WIVS G+ L APRLYWLTVVFLA
Sbjct: 166 DGEDDEEAEERSSYTSRCESMNTMVSFLWWIIGFYWIVSGGEVLELGAPRLYWLTVVFLA 225
Query: 613 FDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCEDQ 434
FDVFFA+FCVV+A +YA+AGQEGA +ADISVLP+Y Y E+
Sbjct: 226 FDVFFAVFCVVVAFFIGIALCCCLPCVIAILYALAGQEGASDADISVLPRYRYSDPSENG 285
Query: 433 EKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFHS 254
EK +EGVMIP+ SG + ECCICL+ YEDG EL A+PCNHHFH
Sbjct: 286 EKGTDEGVMIPILNNSGTST----SERILLREDAECCICLSSYEDGAELSALPCNHHFHW 341
Query: 253 SCITKWLRIHATCPLCKYNILKGSD 179
+CITKWLR+HATCPLCKYNILKGSD
Sbjct: 342 TCITKWLRMHATCPLCKYNILKGSD 366
>ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cicer arietinum]
Length = 349
Score = 356 bits (914), Expect = 1e-95
Identities = 177/325 (54%), Positives = 218/325 (67%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR PS+LVRETAA +LE RRA+W YS+PVVALD+SWN+AF VS A+L
Sbjct: 31 LALLLGRATGRRGPSVLVRETAARELEERRADWGYSKPVVALDMSWNMAFVIVSAAILLC 90
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
T ERP P+R+WI GYA+QC HV LVW EY R + +S DS+
Sbjct: 91 TVDERPNTPIRVWIIGYALQCFVHVVLVWLEYHRRSRRDSRRRQRASDAETSSDGNDSD- 149
Query: 793 VADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFLA 614
DGD S+ R F KRCES+NT +SF WW++GF+W+VS G L+Q APRLYWL VVFLA
Sbjct: 150 --DGDENSSQSR-FTKRCESINTGVSFFWWMVGFYWVVSGGDILLQGAPRLYWLAVVFLA 206
Query: 613 FDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCEDQ 434
FDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY + ++
Sbjct: 207 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQIVSNEE 266
Query: 433 EKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFHS 254
+ + G M+P+ SG L+ ECCICL PYEDG EL +PCNHHFHS
Sbjct: 267 KASGGAGSMVPIETTSGYLA----NERMLLPEDAECCICLCPYEDGTELHTLPCNHHFHS 322
Query: 253 SCITKWLRIHATCPLCKYNILKGSD 179
SCI KWL+++ATCPLCKYNILKG++
Sbjct: 323 SCIVKWLKMNATCPLCKYNILKGNE 347
>ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein
SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 354 bits (909), Expect = 4e-95
Identities = 177/325 (54%), Positives = 222/325 (68%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +++GRAAGRR PSMLVRETAALQL+ RRA+WA+SRPVVALDI+WN+AFAA + AVL +
Sbjct: 46 LAALIGRAAGRRGPSMLVRETAALQLQRRRADWAHSRPVVALDIAWNVAFAAAAAAVLAS 105
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
+A E P PLRLW+ GYA QC+ HV LV ++ A + +G + S+
Sbjct: 106 SAEESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRARGSA--SDVESAGAGTDSSDA 163
Query: 793 VADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFLA 614
++ D + S RCE++NT++SFLWWIIGF+W+VS G+ L APRLYWLTVVFLA
Sbjct: 164 DSEDDERAEGRSSRTSRCETMNTLISFLWWIIGFYWLVSGGEVLEYGAPRLYWLTVVFLA 223
Query: 613 FDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCEDQ 434
FDVFFA+FCV +AC +YA+AGQEGA +ADISVLP+Y + ED
Sbjct: 224 FDVFFAVFCVAVACFIGIALCCCLPCVIAILYALAGQEGASDADISVLPRYRFSDPSEDG 283
Query: 433 EKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFHS 254
EK +EG+MIP+ SG ECC+CL+ YEDG EL A+PCNHHFH
Sbjct: 284 EKGTDEGLMIPILNNSG----VSTSERILLREDAECCVCLSSYEDGAELSALPCNHHFHW 339
Query: 253 SCITKWLRIHATCPLCKYNILKGSD 179
+CITKWLR++ATCPLCKYNILKGSD
Sbjct: 340 TCITKWLRMNATCPLCKYNILKGSD 364
>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 354 bits (908), Expect = 5e-95
Identities = 181/329 (55%), Positives = 219/329 (66%), Gaps = 4/329 (1%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR PSMLVRETAA +LE RRA+W YS+PVVALD+SWN+AF VS A+L
Sbjct: 32 LALLLGRA-GRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLAC 90
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPN--SGVEDS 800
T E P P+R+WI GYA+QC+ HV LVW EY R R + +D
Sbjct: 91 TTSEHPTTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDD 150
Query: 799 EVVADGDG-VGSRQRS-FAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTV 626
+ DGDG G+ RS FAKRCESLNT +SFLWWI+GF+W+VS G L+Q+APRLYWL V
Sbjct: 151 DYSDDGDGSSGNTSRSRFAKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAV 210
Query: 625 VFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHAS 446
VFLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY +
Sbjct: 211 VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRIL 270
Query: 445 CEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNH 266
+ + + G M+P+ S L ECCICL YEDG EL A+PCNH
Sbjct: 271 SDVDKPSGGAGSMVPIETSSAYLE----NERTLLLEDAECCICLCSYEDGAELHALPCNH 326
Query: 265 HFHSSCITKWLRIHATCPLCKYNILKGSD 179
HFHSSCI KWL+++ATCPLCKYNILKG++
Sbjct: 327 HFHSSCIVKWLKMNATCPLCKYNILKGNE 355
>ref|XP_002312464.2| zinc finger family protein [Populus trichocarpa]
gi|550332992|gb|EEE89831.2| zinc finger family protein
[Populus trichocarpa]
Length = 351
Score = 353 bits (905), Expect = 1e-94
Identities = 172/325 (52%), Positives = 217/325 (66%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L ++LGRA GRR PSMLVRETAA +L+ RRA+W YS+PVV+LD+ WN AF VSV +L
Sbjct: 29 LSALLGRATGRRGPSMLVRETAARELDERRADWGYSKPVVSLDMMWNAAFVVVSVTMLLV 88
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
T ERP P+R+WI GYA+QC+ HV LVW EY RD E + V +S+
Sbjct: 89 TVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTRRERDIESQQQSTEEENVPESDE 148
Query: 793 VADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFLA 614
D S + S KRCES+NT++SFLWW++GF+W+VS G L+QNAPRLYWL VVFLA
Sbjct: 149 EDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVVSGGDVLLQNAPRLYWLAVVFLA 208
Query: 613 FDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCEDQ 434
FDVFFAIFCVVLAC+ +YA+AGQEGA EAD+ LPKY + ++
Sbjct: 209 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLIQLPKYKFQMIRNEE 268
Query: 433 EKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFHS 254
+ E G M+P+ S L ECCICL+PYEDG EL A+PCNHHFH+
Sbjct: 269 KPGIEAGKMVPVETSSRFLG----TERILLPEDAECCICLSPYEDGAELHALPCNHHFHA 324
Query: 253 SCITKWLRIHATCPLCKYNILKGSD 179
+CI KWL+++ATCPLCK+NILKG++
Sbjct: 325 TCIVKWLKMNATCPLCKFNILKGNE 349
>ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1 [Glycine
max] gi|571466652|ref|XP_006583717.1| PREDICTED: E3
ubiquitin protein ligase RIE1-like isoform X2 [Glycine
max]
Length = 356
Score = 352 bits (903), Expect = 2e-94
Identities = 176/328 (53%), Positives = 217/328 (66%), Gaps = 3/328 (0%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR PSMLVRETAA +LE RRA+W YS+PVVALD+SWN+AF V+ +L
Sbjct: 33 LALLLGRA-GRRGPSMLVRETAARELEERRADWGYSKPVVALDMSWNMAFVVVTAVMLAC 91
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
T ERP P+R+WI GYA+QC+ HV LVW EY + ++G D +
Sbjct: 92 TTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSHHGQRARDVESDAGSGDEDY 151
Query: 793 VADGD---GVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVV 623
D D G SR R F KRCE LNT +SFLWWI+GF+W+VS G L+Q+APRLYWL VV
Sbjct: 152 SDDRDWSSGYSSRSR-FTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVV 210
Query: 622 FLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASC 443
FLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY +
Sbjct: 211 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILS 270
Query: 442 EDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHH 263
++ + + G M+P+ S L+ ECCICL YEDG EL A+PCNHH
Sbjct: 271 DEDKPSGGAGSMVPIETSSAYLA----NERTLLPEDAECCICLCSYEDGAELHALPCNHH 326
Query: 262 FHSSCITKWLRIHATCPLCKYNILKGSD 179
FHSSCI KWL+++ATCPLCKYNILKG++
Sbjct: 327 FHSSCIVKWLKMNATCPLCKYNILKGNE 354
>ref|NP_001149757.1| LOC100283384 [Zea mays] gi|195632056|gb|ACG36686.1| protein binding
protein [Zea mays] gi|413938751|gb|AFW73302.1| putative
RING zinc finger domain superfamily protein isoform 1
[Zea mays] gi|413938752|gb|AFW73303.1| putative RING zinc
finger domain superfamily protein isoform 2 [Zea mays]
Length = 367
Score = 351 bits (901), Expect = 3e-94
Identities = 177/325 (54%), Positives = 221/325 (68%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +++GRAAGRR PSMLVRETAALQL+ RRA+WA+SRPV+ALDI+WN+AFAA + AVL +
Sbjct: 47 LAALIGRAAGRRGPSMLVRETAALQLQRRRADWAHSRPVLALDIAWNVAFAAAAAAVLSS 106
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
+A E P PLRLW+ GYA QC+ HV LV ++ R A + +G + S+
Sbjct: 107 SAEESPVKPLRLWVVGYAAQCLVHVGLVCADTRRETRRARRSA--SDVESAGAGTDSSDA 164
Query: 793 VADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFLA 614
++ D + S+ RCE++NT++SFLWWIIGF+WI S G+ L APRLYWLT+VFLA
Sbjct: 165 DSEDDERAEGRSSYTGRCETMNTLISFLWWIIGFYWIFSGGEVLEHGAPRLYWLTIVFLA 224
Query: 613 FDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCEDQ 434
FDVFFA+FCV +AC +YA+AGQEGA +ADISVL +Y Y ED
Sbjct: 225 FDVFFAVFCVAVACFIGIALCCCLPCVIAILYALAGQEGASDADISVLLRYRYSDPSEDG 284
Query: 433 EKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFHS 254
EK +EG+MIP+ SG ECCICL+ YEDG EL A+PCNHHFH
Sbjct: 285 EKGVDEGLMIPILNNSG----MSTSERILLREDAECCICLSSYEDGAELSALPCNHHFHW 340
Query: 253 SCITKWLRIHATCPLCKYNILKGSD 179
CITKWLR++ATCPLCKYNILKGSD
Sbjct: 341 PCITKWLRMNATCPLCKYNILKGSD 365
>gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus persica]
Length = 374
Score = 348 bits (894), Expect = 2e-93
Identities = 176/334 (52%), Positives = 221/334 (66%), Gaps = 9/334 (2%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR PSMLVRETAA +L+ RRA+W YS+PVVALD+ WN AF VSVA+L
Sbjct: 44 LAMLLGRATGRRGPSMLVRETAARELDERRADWGYSKPVVALDMMWNTAFVVVSVAMLIW 103
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEY------XXXXXXXXRDA---EHDGRPAP 821
T E P P+RLWI GYA+QC HV LVW EY +DA +H
Sbjct: 104 TDHEHPNTPIRLWICGYALQCFVHVVLVWVEYQRRNNIARRISRRNQDAQQNQHQVEIDA 163
Query: 820 NSGVEDSEVVADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRL 641
N ++ A D S + S +KRCE++NT+ SFLWWI+GF+W+V+ G+ L+QNAPRL
Sbjct: 164 NDTDDEEAAAAARDLAISTRSSLSKRCETVNTMASFLWWIVGFYWVVAGGEVLLQNAPRL 223
Query: 640 YWLTVVFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKY 461
YWL VVFLAFDVFFAIFCVVLAC+ +YA+AGQEGA +AD+S+LPKY
Sbjct: 224 YWLAVVFLAFDVFFAIFCVVLACLIGVALCCCLPCIIAILYAVAGQEGASDADLSILPKY 283
Query: 460 LYHASCEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLA 281
+ +S E++ G MIP+ SG L+ ECCICL+PYEDG EL
Sbjct: 284 RFRSSSEEKSSVG-AGKMIPVETSSGYLA----IERILLPEDAECCICLSPYEDGTELHT 338
Query: 280 MPCNHHFHSSCITKWLRIHATCPLCKYNILKGSD 179
+PCNHHFH++CI KWL+++ATCPLCKYNILKG++
Sbjct: 339 LPCNHHFHATCIVKWLKMNATCPLCKYNILKGNE 372
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 348 bits (893), Expect = 3e-93
Identities = 180/331 (54%), Positives = 218/331 (65%), Gaps = 6/331 (1%)
Frame = -1
Query: 1153 LLSILGRAAGRRR-PSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLG 977
L +LGRA GR PSMLVRETAA +LE RRA+W YS+PVVALDI WN AF VS A+L
Sbjct: 695 LALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 754
Query: 976 ATACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAP--NSGVED 803
T ERP +RLWI GYA+QC+ HV LVW EY RD E G N+ ED
Sbjct: 755 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDVRDVNNDSED 814
Query: 802 SEVVADGDGV---GSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWL 632
E DG+ S + SF KRCES+NT+ SFLWWI+GF+W+VS G L+Q+APRLYWL
Sbjct: 815 EEE----DGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQDAPRLYWL 870
Query: 631 TVVFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYH 452
VVFLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY +
Sbjct: 871 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFE 930
Query: 451 ASCEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPC 272
D++ G M+P+ G ++ ECCICL+ YEDG EL A+PC
Sbjct: 931 VQNNDEKLGVGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPC 986
Query: 271 NHHFHSSCITKWLRIHATCPLCKYNILKGSD 179
NHHFHS+CI KWL+++ATCPLCKYNILKG++
Sbjct: 987 NHHFHSTCIVKWLKMNATCPLCKYNILKGNE 1017
>ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citrus clementina]
gi|557550773|gb|ESR61402.1| hypothetical protein
CICLE_v10015731mg [Citrus clementina]
Length = 359
Score = 348 bits (893), Expect = 3e-93
Identities = 180/331 (54%), Positives = 218/331 (65%), Gaps = 6/331 (1%)
Frame = -1
Query: 1153 LLSILGRAAGRRR-PSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLG 977
L +LGRA GR PSMLVRETAA +LE RRA+W YS+PVVALDI WN AF VS A+L
Sbjct: 35 LALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNSAFVIVSAAMLI 94
Query: 976 ATACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAP--NSGVED 803
T ERP +RLWI GYA+QC+ HV LVW EY RD E G N+ ED
Sbjct: 95 ITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRRNTRRVRDDEMGGEDVRDVNNDSED 154
Query: 802 SEVVADGDGV---GSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWL 632
E DG+ S + SF KRCES+NT+ SFLWWI+GF+W+VS G L+Q+APRLYWL
Sbjct: 155 EEE----DGIVYRTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLLQDAPRLYWL 210
Query: 631 TVVFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYH 452
VVFLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY +
Sbjct: 211 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFE 270
Query: 451 ASCEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPC 272
D++ G M+P+ G ++ ECCICL+ YEDG EL A+PC
Sbjct: 271 VQNNDEKLGVGAGKMVPIETNGGYVA----NERILLPEDAECCICLSSYEDGTELHALPC 326
Query: 271 NHHFHSSCITKWLRIHATCPLCKYNILKGSD 179
NHHFHS+CI KWL+++ATCPLCKYNILKG++
Sbjct: 327 NHHFHSTCIVKWLKMNATCPLCKYNILKGNE 357
>ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Populus trichocarpa]
gi|550329589|gb|EEF00953.2| hypothetical protein
POPTR_0010s11660g [Populus trichocarpa]
Length = 327
Score = 347 bits (889), Expect = 8e-93
Identities = 176/326 (53%), Positives = 212/326 (65%), Gaps = 1/326 (0%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR PSMLVRETAA +L+ RRA+ YS+PVVALDI WN AF VSV +L
Sbjct: 29 LAVLLGRATGRRGPSMLVRETAARELDERRADLGYSKPVVALDILWNAAFVVVSVTMLVV 88
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
TA ERP P+RLWI GY++QC+ HV LVW EY RD E
Sbjct: 89 TAKERPNTPIRLWICGYSLQCLVHVILVWLEYRRRNTRRGRDVE---------------- 132
Query: 793 VADGDGVGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFLA 614
++ F KRCES+NT++SFLWWI+GF+W+VS G L+QNAPRLYWL VVFLA
Sbjct: 133 ---------SEQHFTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLA 183
Query: 613 FDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHA-SCED 437
FDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY Y E+
Sbjct: 184 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNEE 243
Query: 436 QEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFH 257
+ G M+P+ SG LS ECCICL+PYEDG EL A+PCNHHFH
Sbjct: 244 KRPRVGAGKMVPVETSSGYLS----TERVLLPEDAECCICLSPYEDGAELHALPCNHHFH 299
Query: 256 SSCITKWLRIHATCPLCKYNILKGSD 179
+ CI KWL+++ATCPLCKYNILKG++
Sbjct: 300 AMCIVKWLKMNATCPLCKYNILKGNE 325
>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 345 bits (885), Expect = 2e-92
Identities = 177/322 (54%), Positives = 215/322 (66%), Gaps = 6/322 (1%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L ++GRA GRR PSMLVRETAA +LE RRA+W YS+PVVALD+ WN++F VS+ +L
Sbjct: 31 LALLMGRATGRRGPSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLIC 90
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPA-PNSGVEDSE 797
TA ERP P+RLWI GYA+QC HV LVW EY RD E +P +S V DSE
Sbjct: 91 TARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRRVRDEEQQQQPQHSDSDVNDSE 150
Query: 796 VVADGDG-----VGSRQRSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWL 632
D DG G Q S KRCES+NT+ SFLWWI+GF+W+VS G+ L+QNAPRLYWL
Sbjct: 151 ---DEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWL 207
Query: 631 TVVFLAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYH 452
VVFLAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LP+Y +
Sbjct: 208 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFE 267
Query: 451 ASCEDQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPC 272
A+ E++ G M P SG L+ ECCICL+ YEDG EL A+PC
Sbjct: 268 ANNEEKSGVG-AGTMFPTETSSGYLA----NERILLPEDAECCICLSSYEDGAELHALPC 322
Query: 271 NHHFHSSCITKWLRIHATCPLC 206
NHHFHS+CI KWL+++ATCPLC
Sbjct: 323 NHHFHSTCIAKWLKMNATCPLC 344
>gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 344 bits (883), Expect = 4e-92
Identities = 174/326 (53%), Positives = 218/326 (66%), Gaps = 1/326 (0%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR SMLVRETAA +LE RR +W YS+PVVALDI+WNLAF VS+ VL
Sbjct: 39 LALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIR 98
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
+ E+P P+RLWI YA QC+ HV LVW E+ RD E + P+ V +
Sbjct: 99 SVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQQPDGYVTNE-- 156
Query: 793 VADGDGVGSRQ-RSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFL 617
+D D G R S AKRCES+NT++S +WW+ GF+W+V+ G L+QNAP LYWL VVFL
Sbjct: 157 -SDEDDGGQRSLSSVAKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFL 215
Query: 616 AFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCED 437
AFDVFFA+FCVVLAC+ +YA+AGQEGA +AD+S+LPKY Y S
Sbjct: 216 AFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRYRVS--- 272
Query: 436 QEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFH 257
E + +G+M+P+ S L+ ECCICL+PYEDGVEL A+PCNHHFH
Sbjct: 273 NEPSPGDGLMVPVETSSRYLT----TERVLLREDAECCICLSPYEDGVELHALPCNHHFH 328
Query: 256 SSCITKWLRIHATCPLCKYNILKGSD 179
+CITKWL+++ATCPLCKYNILK S+
Sbjct: 329 YACITKWLKMNATCPLCKYNILKNSE 354
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 343 bits (880), Expect = 9e-92
Identities = 176/327 (53%), Positives = 217/327 (66%), Gaps = 2/327 (0%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR PSMLVRETAA +L+ RRA+W YS+PVVALD+ WN AF VSV +L
Sbjct: 689 LAMLLGRATGRRGPSMLVRETAARELDERRADWGYSKPVVALDMMWNTAFVVVSVVMLIL 748
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEY-XXXXXXXXRDAEHDGRPAPNSGVEDSE 797
T ERP P+RLWI GYA+QC HV LVW EY R AE ++ D E
Sbjct: 749 TRDERPNTPIRLWICGYALQCFVHVALVWVEYRRRTSRRGRRTAEAQQSSEADANESDDE 808
Query: 796 VVADGDGVGSRQR-SFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVF 620
D +G+ R S +KRCES+NT++SFLWWI+GF+W+VS G L+Q+APRLYWL+VVF
Sbjct: 809 AAMD---LGAPIRSSVSKRCESINTMVSFLWWIVGFYWVVSGGDRLLQDAPRLYWLSVVF 865
Query: 619 LAFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCE 440
LAFDVFFAIFCVVLAC+ +YA+AGQEGA EAD+S+LPKY + S E
Sbjct: 866 LAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFRISGE 925
Query: 439 DQEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHF 260
++ G MIP+ S ECCICL+ YEDG +L +PCNHHF
Sbjct: 926 EKSSVG-AGKMIPME----TTSAYPAVERILLPEDAECCICLSQYEDGADLHTLPCNHHF 980
Query: 259 HSSCITKWLRIHATCPLCKYNILKGSD 179
H++CI KWL+++ATCPLCKYNILKGS+
Sbjct: 981 HANCIVKWLKMNATCPLCKYNILKGSE 1007
>ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin
protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 342 bits (876), Expect = 3e-91
Identities = 173/326 (53%), Positives = 217/326 (66%), Gaps = 1/326 (0%)
Frame = -1
Query: 1153 LLSILGRAAGRRRPSMLVRETAALQLEVRRANWAYSRPVVALDISWNLAFAAVSVAVLGA 974
L +LGRA GRR SMLVRETAA +LE RR +W YS+PVVALDI+WNLAF VS+ VL
Sbjct: 39 LALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIH 98
Query: 973 TACERPGAPLRLWIAGYAVQCVFHVFLVWSEYXXXXXXXXRDAEHDGRPAPNSGVEDSEV 794
+ E+P P+RLWI YA QC+ HV LVW E+ RD E + P+ V +
Sbjct: 99 SVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQEPDGYVTNE-- 156
Query: 793 VADGDGVGSRQ-RSFAKRCESLNTILSFLWWIIGFFWIVSSGKDLVQNAPRLYWLTVVFL 617
+D D G R S AKRCES+NT++S +WW+ GF+W+V+ G L+QNAP LYWL VVFL
Sbjct: 157 -SDEDDGGQRSFSSVAKRCESVNTMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFL 215
Query: 616 AFDVFFAIFCVVLACVXXXXXXXXXXXXXXXIYAIAGQEGALEADISVLPKYLYHASCED 437
AFDVFFA+FCVVLAC+ +YA+AGQEGA +AD+S+LPKY Y S
Sbjct: 216 AFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRYRVS--- 272
Query: 436 QEKTAEEGVMIPLNPGSGNLSXXXXXXXXXXXXXXECCICLTPYEDGVELLAMPCNHHFH 257
E + +G+M+P+ S L+ ECCICL+PYEDGVEL A+PCNHHFH
Sbjct: 273 NEPSPGDGLMVPVETSSRYLT----TERVLLCEDAECCICLSPYEDGVELHALPCNHHFH 328
Query: 256 SSCITKWLRIHATCPLCKYNILKGSD 179
+CITKWL+++ATCPLCKYNILK +
Sbjct: 329 YACITKWLKMNATCPLCKYNILKNCE 354