BLASTX nr result

ID: Zingiber23_contig00028756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00028756
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299468.1| Dynamin-like family protein [Populus trichoc...    44   8e-06
gb|AAM65743.1| dynamin-like protein [Arabidopsis thaliana]             44   8e-06

>ref|XP_002299468.1| Dynamin-like family protein [Populus trichocarpa]
           gi|222846726|gb|EEE84273.1| Dynamin-like family protein
           [Populus trichocarpa]
          Length = 610

 Score = 44.3 bits (103), Expect(2) = 8e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 163 DLTATERPPQARNLGKLYSIM*ICRIFDQIYKEHL 59
           +L+   +P  A   GK+YSIM ICR+FDQIYKEHL
Sbjct: 316 ELSRLGKPIAADAGGKMYSIMEICRLFDQIYKEHL 350



 Score = 30.8 bits (68), Expect(2) = 8e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 59  DGVRPGVLKVYNVFDKHL 6
           DGVRPG  K+YNVFD  L
Sbjct: 351 DGVRPGGDKIYNVFDNQL 368


>gb|AAM65743.1| dynamin-like protein [Arabidopsis thaliana]
          Length = 429

 Score = 43.5 bits (101), Expect(2) = 8e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 163 DLTATERPPQARNLGKLYSIM*ICRIFDQIYKEHL 59
           +L+   +P  A   GKLYSIM ICR+FDQI+KEHL
Sbjct: 316 ELSRLGKPIAADAGGKLYSIMEICRLFDQIFKEHL 350



 Score = 31.6 bits (70), Expect(2) = 8e-06
 Identities = 14/18 (77%), Positives = 14/18 (77%)
 Frame = -2

Query: 59  DGVRPGVLKVYNVFDKHL 6
           DGVR G  KVYNVFD HL
Sbjct: 351 DGVRAGGEKVYNVFDNHL 368


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