BLASTX nr result
ID: Zingiber23_contig00028663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028663
(468 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containin... 76 5e-12
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin... 76 5e-12
ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containin... 76 5e-12
ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containin... 76 5e-12
ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containin... 76 5e-12
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 75 7e-12
dbj|BAJ93181.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 9e-12
ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part... 75 1e-11
ref|XP_006829762.1| hypothetical protein AMTR_s00119p00021560 [A... 75 1e-11
gb|EPS64223.1| hypothetical protein M569_10558, partial [Genlise... 75 1e-11
gb|EMJ20776.1| hypothetical protein PRUPE_ppa023263mg, partial [... 75 1e-11
gb|EMJ14799.1| hypothetical protein PRUPE_ppa002413mg [Prunus pe... 75 1e-11
gb|ESW03436.1| hypothetical protein PHAVU_011G0138001g [Phaseolu... 74 1e-11
ref|XP_006587690.1| PREDICTED: zinc finger CCCH domain-containin... 74 2e-11
ref|XP_006386017.1| hypothetical protein POPTR_0003s20310g [Popu... 74 2e-11
ref|XP_002303898.2| hypothetical protein POPTR_0003s20310g [Popu... 74 2e-11
ref|XP_006386016.1| hypothetical protein POPTR_0003s20310g [Popu... 74 2e-11
ref|XP_006292618.1| hypothetical protein CARUB_v10018860mg [Caps... 74 2e-11
ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin... 74 2e-11
ref|XP_002877836.1| hypothetical protein ARALYDRAFT_485553 [Arab... 74 2e-11
>ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X3 [Solanum tuberosum]
Length = 692
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/54 (59%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD YEAT++V +R+QSLDPENA K+MG++L+Q+ GE+++IRLA PET L++L+
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLI 54
>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Solanum tuberosum]
Length = 695
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/54 (59%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD YEAT++V +R+QSLDPENA K+MG++L+Q+ GE+++IRLA PET L++L+
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLI 54
>ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Solanum tuberosum]
Length = 701
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/54 (59%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD YEAT++V +R+QSLDPENA K+MG++L+Q+ GE+++IRLA PET L++L+
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLI 54
>ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform 2 [Solanum lycopersicum]
Length = 691
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/54 (59%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD YEAT++V +R+QSLDPENA K+MG++L+Q+ GE+++IRLA PET L++L+
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLI 54
>ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform 1 [Solanum lycopersicum]
Length = 697
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/54 (59%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD YEAT++V +R+QSLDPENA K+MG++L+Q+ GE+++IRLA PET L++L+
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLI 54
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/54 (59%), Positives = 48/54 (88%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD+YEATR+VF+R+Q+LDPENA K+MG+LL+Q++GE+++IRLA PE + +L+
Sbjct: 1 MDSYEATRIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLI 54
>dbj|BAJ93181.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/54 (62%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MDAYEAT+VVFAR+Q LDP++A K+MG LL+Q++GE+++IRLA PE LLA++
Sbjct: 1 MDAYEATKVVFARIQGLDPDHAAKIMGLLLIQDHGEKEMIRLAFGPEALLLAVM 54
>ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus
trichocarpa] gi|550331093|gb|EEE87307.2| hypothetical
protein POPTR_0009s05520g, partial [Populus trichocarpa]
Length = 728
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/54 (62%), Positives = 46/54 (85%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD+YEAT +VF+R+QSL+PENA K+MG+LLLQ+ GE+++IRLA PET L L+
Sbjct: 44 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLI 97
>ref|XP_006829762.1| hypothetical protein AMTR_s00119p00021560 [Amborella trichopoda]
gi|548835343|gb|ERM97178.1| hypothetical protein
AMTR_s00119p00021560 [Amborella trichopoda]
Length = 746
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/54 (61%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MDAYEATR+VF+R+Q+LDPENA K+MG LL+Q++GE+++IRLA PE + ++V
Sbjct: 1 MDAYEATRIVFSRIQNLDPENAPKIMGLLLIQDHGEKEMIRLAFGPEALVQSIV 54
>gb|EPS64223.1| hypothetical protein M569_10558, partial [Genlisea aurea]
Length = 525
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/54 (59%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD+YEAT+VV +R+Q+LDPENA K+MG++L+Q+ GE+++IRLA PET LL+ +
Sbjct: 1 MDSYEATKVVMSRIQTLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLLSCI 54
>gb|EMJ20776.1| hypothetical protein PRUPE_ppa023263mg, partial [Prunus persica]
Length = 745
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/54 (59%), Positives = 47/54 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD+YEATR+VFAR+Q+LDPENA ++MG LL+Q++GE+++IRLA PE L +++
Sbjct: 1 MDSYEATRIVFARIQNLDPENASRIMGLLLIQDHGEKEMIRLAFGPEAFLHSVI 54
>gb|EMJ14799.1| hypothetical protein PRUPE_ppa002413mg [Prunus persica]
Length = 675
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/54 (59%), Positives = 48/54 (88%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPETHLLALV 80
MD+YEAT++V++R+Q+LDPENA K+MGFLL+Q++G++++IRLA PET L L+
Sbjct: 1 MDSYEATKIVYSRIQNLDPENASKIMGFLLIQDHGDKEMIRLAFGPETLLHNLI 54
>gb|ESW03436.1| hypothetical protein PHAVU_011G0138001g [Phaseolus vulgaris]
Length = 705
Score = 73.9 bits (180), Expect(2) = 1e-11
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPE 101
MD YEATR+VFAR+Q+LDPENA K+MG LLLQ++GE+++IRLA PE
Sbjct: 1 MDGYEATRIVFARIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPE 47
Score = 20.8 bits (42), Expect(2) = 1e-11
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -1
Query: 87 RWSPKPGRSSASQLPPPRRLPFCSARTPP 1
R S R A LPP +P S+ PP
Sbjct: 83 RQSSASSRLGAINLPPALTIPNPSSSWPP 111
>ref|XP_006587690.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Glycine max]
Length = 698
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPE 101
MD+YEATRVVF+R+Q+LDPENA K+MG LLLQ++GE+++IRLA PE
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPE 47
>ref|XP_006386017.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343612|gb|ERP63814.1| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 682
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/47 (68%), Positives = 43/47 (91%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPE 101
MDAYEATR+VF+R+Q+LDPENA K+MG LL+Q++GE+++IRLA PE
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPE 47
>ref|XP_002303898.2| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343611|gb|EEE78877.2| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 705
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/47 (68%), Positives = 43/47 (91%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPE 101
MDAYEATR+VF+R+Q+LDPENA K+MG LL+Q++GE+++IRLA PE
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPE 47
>ref|XP_006386016.1| hypothetical protein POPTR_0003s20310g [Populus trichocarpa]
gi|550343610|gb|ERP63813.1| hypothetical protein
POPTR_0003s20310g [Populus trichocarpa]
Length = 623
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/47 (68%), Positives = 43/47 (91%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPE 101
MDAYEATR+VF+R+Q+LDPENA K+MG LL+Q++GE+++IRLA PE
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPE 47
>ref|XP_006292618.1| hypothetical protein CARUB_v10018860mg [Capsella rubella]
gi|482561325|gb|EOA25516.1| hypothetical protein
CARUB_v10018860mg [Capsella rubella]
Length = 538
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPET 98
MD YEATR+V +R+QSLDPENA K+MG LLLQ++GE+++IRLA PET
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPET 48
>ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Glycine max]
Length = 696
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPE 101
MD+YEATRVVF+R+Q+LDPENA K+MG LLLQ++GE+++IRLA PE
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPE 47
>ref|XP_002877836.1| hypothetical protein ARALYDRAFT_485553 [Arabidopsis lyrata subsp.
lyrata] gi|297323674|gb|EFH54095.1| hypothetical protein
ARALYDRAFT_485553 [Arabidopsis lyrata subsp. lyrata]
Length = 539
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = -3
Query: 241 MDAYEATRVVFARLQSLDPENARKVMGFLLLQENGEEDVIRLALAPET 98
MD YEATR+V +R+QSLDPENA K+MG LLLQ++GE+++IRLA PET
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPET 48