BLASTX nr result
ID: Zingiber23_contig00028557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00028557
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004952741.1| PREDICTED: F-box/kelch-repeat protein SKIP20... 79 8e-13
dbj|BAD15578.1| kelch repeat-containing F-box family protein-lik... 79 8e-13
gb|EAY86313.1| hypothetical protein OsI_07686 [Oryza sativa Indi... 79 8e-13
ref|XP_002452297.1| hypothetical protein SORBIDRAFT_04g023200 [S... 75 9e-12
ref|XP_003524946.1| PREDICTED: F-box/kelch-repeat protein At1g55... 73 4e-11
ref|XP_002880085.1| hypothetical protein ARALYDRAFT_483537 [Arab... 73 4e-11
gb|EMJ03328.1| hypothetical protein PRUPE_ppa006078mg [Prunus pe... 72 1e-10
ref|XP_003531234.1| PREDICTED: F-box/kelch-repeat protein At1g55... 72 1e-10
gb|ACU23020.1| unknown [Glycine max] 71 1e-10
ref|XP_006402638.1| hypothetical protein EUTSA_v10006395mg [Eutr... 71 2e-10
ref|XP_002524469.1| Protein AFR, putative [Ricinus communis] gi|... 71 2e-10
emb|CBI16496.3| unnamed protein product [Vitis vinifera] 70 2e-10
ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55... 70 2e-10
ref|XP_006478506.1| PREDICTED: F-box/kelch-repeat protein SKIP20... 70 3e-10
ref|XP_006441974.1| hypothetical protein CICLE_v10020147mg [Citr... 70 3e-10
ref|XP_002297645.2| hypothetical protein POPTR_0001s04530g [Popu... 70 3e-10
ref|XP_002304010.2| kelch repeat-containing F-box family protein... 70 3e-10
ref|XP_004287344.1| PREDICTED: F-box/kelch-repeat protein At1g55... 70 3e-10
ref|NP_566009.1| F-box/kelch-repeat protein [Arabidopsis thalian... 70 3e-10
ref|XP_006354154.1| PREDICTED: F-box/kelch-repeat protein At1g55... 70 4e-10
>ref|XP_004952741.1| PREDICTED: F-box/kelch-repeat protein SKIP20-like [Setaria italica]
Length = 371
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = +1
Query: 49 ELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRERIGAAEDLIFLVQ 228
ELIPGLPDD+A +C+ARV R H +R VCR WR V +++F R R GAAED++FLVQ
Sbjct: 15 ELIPGLPDDVAMECLARVPSRSHRRMRRVCRGWRGAVGSAEFRRRRRTAGAAEDIVFLVQ 74
Query: 229 -ACRGGD 246
A GGD
Sbjct: 75 SAPAGGD 81
>dbj|BAD15578.1| kelch repeat-containing F-box family protein-like [Oryza sativa
Japonica Group]
Length = 399
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +1
Query: 49 ELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRERIGAAEDLIFLVQ 228
ELIPGLPDD+A +C+ARV R H +R VCR WR + F R R GAAED++FLVQ
Sbjct: 23 ELIPGLPDDVAMECLARVPSRSHRAVRRVCRGWRRAAASEAFRRRRRAAGAAEDVVFLVQ 82
Query: 229 A--CRGGD 246
A RGGD
Sbjct: 83 ATPARGGD 90
>gb|EAY86313.1| hypothetical protein OsI_07686 [Oryza sativa Indica Group]
Length = 391
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +1
Query: 49 ELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRERIGAAEDLIFLVQ 228
ELIPGLPDD+A +C+ARV R H +R VCR WR + F R R GAAED++FLVQ
Sbjct: 23 ELIPGLPDDVAMECLARVPSRSHRAVRRVCRGWRRAAASEAFRRRRRAAGAAEDVVFLVQ 82
Query: 229 A--CRGGD 246
A RGGD
Sbjct: 83 ATPARGGD 90
>ref|XP_002452297.1| hypothetical protein SORBIDRAFT_04g023200 [Sorghum bicolor]
gi|241932128|gb|EES05273.1| hypothetical protein
SORBIDRAFT_04g023200 [Sorghum bicolor]
Length = 416
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +1
Query: 49 ELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRERIGAAEDLIFLVQ 228
ELIPGLPDD+A +C+ARV R H +R VCR WR V +++F R R GA+ED++FLVQ
Sbjct: 47 ELIPGLPDDVAMECLARVPSRSHRRMRRVCRGWRGTVGSAEFRRRRRAAGASEDIVFLVQ 106
>ref|XP_003524946.1| PREDICTED: F-box/kelch-repeat protein At1g55270 isoformX1 [Glycine
max] gi|356512481|ref|XP_003524947.1| PREDICTED:
F-box/kelch-repeat protein At1g55270 isoformX2 [Glycine
max] gi|571455688|ref|XP_006580153.1| PREDICTED:
F-box/kelch-repeat protein At1g55270 isoform X3 [Glycine
max] gi|571455691|ref|XP_006580154.1| PREDICTED:
F-box/kelch-repeat protein At1g55270 isoform X4 [Glycine
max]
Length = 437
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
HRSK R L+PGLPDD+A C+ RV HS LRLVC+RW L++ + FY L
Sbjct: 61 HRSKNSRRERTRVQPPLLPGLPDDLAIACLIRVPRVEHSKLRLVCKRWYRLLSGNFFYSL 120
Query: 184 RERIGAAEDLIFLVQACRGG 243
R +G AE+ +++++ R G
Sbjct: 121 RRSLGMAEEWVYVIKRDRDG 140
>ref|XP_002880085.1| hypothetical protein ARALYDRAFT_483537 [Arabidopsis lyrata subsp.
lyrata] gi|297325924|gb|EFH56344.1| hypothetical protein
ARALYDRAFT_483537 [Arabidopsis lyrata subsp. lyrata]
Length = 405
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +1
Query: 10 SKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRE 189
SK+ G +C+ +LIPGLP ++A +C+ RV +F S ++ VCR WR L++ S F R R
Sbjct: 4 SKKNAGDFQKCHDDLIPGLPSELALECLVRVPYQFQSAMKSVCRSWRSLLSDSSFIRERH 63
Query: 190 RIGAAEDLIFLVQ 228
R G E L+ LVQ
Sbjct: 64 RCGKTELLLCLVQ 76
>gb|EMJ03328.1| hypothetical protein PRUPE_ppa006078mg [Prunus persica]
Length = 428
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +1
Query: 7 RSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLR 186
RSK RG L+PGLPDD+A C+ RV H LRLVC+RW L+ + FY LR
Sbjct: 52 RSKPSRGDGSRIQSPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLVGNFFYSLR 111
Query: 187 ERIGAAEDLIFLVQACRGG 243
+ +G AE+ I+L++ R G
Sbjct: 112 KSLGIAEEWIYLIKRDRDG 130
>ref|XP_003531234.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like [Glycine max]
Length = 437
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
HRSK R L+PGLPDD+A C+ RV H LRLVC+RW L++ + FY L
Sbjct: 61 HRSKNSRRERTRVQPPLLPGLPDDLAIACLIRVPRVEHGKLRLVCKRWYHLLSGNFFYSL 120
Query: 184 RERIGAAEDLIFLVQACRGG 243
R +G AE+ +++++ R G
Sbjct: 121 RRSLGMAEEWVYVIKRDRDG 140
>gb|ACU23020.1| unknown [Glycine max]
Length = 342
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
HRSK R L+PGLPD++A C+ RV HS LRLVC+RW L++ + FY L
Sbjct: 61 HRSKNSRRERTRVQPPLLPGLPDELAIACLIRVPRVEHSKLRLVCKRWYRLLSGNFFYSL 120
Query: 184 RERIGAAEDLIFLVQACRGG 243
R +G AE+ +++++ R G
Sbjct: 121 RRSLGMAEEWVYVIKRDRDG 140
>ref|XP_006402638.1| hypothetical protein EUTSA_v10006395mg [Eutrema salsugineum]
gi|557103737|gb|ESQ44091.1| hypothetical protein
EUTSA_v10006395mg [Eutrema salsugineum]
Length = 415
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +1
Query: 46 RELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRERIGAAEDLIFLV 225
R+LIPGLP+++A +C+ RV FHS ++ VCR WR L++ F R R R G AE L+ LV
Sbjct: 12 RDLIPGLPEELAMECLVRVPFEFHSSMKSVCRSWRSLISDRSFNRERRRFGKAETLLCLV 71
Query: 226 Q 228
Q
Sbjct: 72 Q 72
>ref|XP_002524469.1| Protein AFR, putative [Ricinus communis]
gi|223536257|gb|EEF37909.1| Protein AFR, putative
[Ricinus communis]
Length = 436
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 7 RSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLR 186
RSK RG L+PGLPDD+A C+ RV H LRLVC+RW L+ + FY LR
Sbjct: 60 RSKPSRGDRSRNQSPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLAGNFFYSLR 119
Query: 187 ERIGAAEDLIFLVQACRGG 243
+ +G AE+ I++++ R G
Sbjct: 120 KSLGIAEEWIYIIKRDRDG 138
>emb|CBI16496.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
H+SK R L+PGLPDD+A C+ RV H LRLVC+RW L++ + FY L
Sbjct: 61 HKSKNSRRERTRFQPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWHRLLSGNFFYSL 120
Query: 184 RERIGAAEDLIFLVQACRGG 243
R+ +G AE+ +++++ R G
Sbjct: 121 RKSLGMAEEWVYVIKRDRDG 140
>ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55270 [Vitis vinifera]
gi|147841213|emb|CAN64353.1| hypothetical protein
VITISV_013831 [Vitis vinifera]
Length = 437
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
H+SK R L+PGLPDD+A C+ RV H LRLVC+RW L++ + FY L
Sbjct: 61 HKSKNSRRERTRFQPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWHRLLSGNFFYSL 120
Query: 184 RERIGAAEDLIFLVQACRGG 243
R+ +G AE+ +++++ R G
Sbjct: 121 RKSLGMAEEWVYVIKRDRDG 140
>ref|XP_006478506.1| PREDICTED: F-box/kelch-repeat protein SKIP20-like [Citrus sinensis]
Length = 449
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1
Query: 13 KRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRER 192
K ++ + + LIPGLPD+IA +C+ RV +FH+ L+ VC+RW +L+++ FYR R R
Sbjct: 3 KAEKKQQQQEVQNLIPGLPDEIAMECLIRVPYKFHNDLKSVCQRWLNLISSHSFYRERIR 62
Query: 193 IGAAEDLIFLVQ 228
G AE L+ VQ
Sbjct: 63 SGKAEHLVCQVQ 74
>ref|XP_006441974.1| hypothetical protein CICLE_v10020147mg [Citrus clementina]
gi|557544236|gb|ESR55214.1| hypothetical protein
CICLE_v10020147mg [Citrus clementina]
Length = 446
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1
Query: 13 KRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRER 192
K ++ + + LIPGLPD+IA +C+ RV +FH+ L+ VC+RW +L+++ FYR R R
Sbjct: 3 KTEKKQQQQEVQNLIPGLPDEIAMECLIRVPYKFHNDLKSVCQRWLNLISSHSFYRERIR 62
Query: 193 IGAAEDLIFLVQ 228
G AE L+ VQ
Sbjct: 63 SGKAEHLVCQVQ 74
>ref|XP_002297645.2| hypothetical protein POPTR_0001s04530g [Populus trichocarpa]
gi|550346504|gb|EEE82450.2| hypothetical protein
POPTR_0001s04530g [Populus trichocarpa]
Length = 424
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
H+SK R L+PGLPDD+A C+ RV H LRLVC+RW L+ + FY L
Sbjct: 49 HKSKTSRRERTRVQPPLLPGLPDDLAIACLIRVPRAEHRKLRLVCKRWYRLLAGNYFYSL 108
Query: 184 RERIGAAEDLIFLVQACRGG 243
R+ +G AE+ +++++ R G
Sbjct: 109 RKSLGMAEEWVYVIKRDRDG 128
>ref|XP_002304010.2| kelch repeat-containing F-box family protein [Populus trichocarpa]
gi|550343698|gb|EEE78989.2| kelch repeat-containing
F-box family protein [Populus trichocarpa]
Length = 438
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
H+SK R L+PGLPDD+A C+ RV H LRLVC+RW L+ + FY L
Sbjct: 62 HKSKTSRRERTRVQPPLLPGLPDDLAIACLIRVPRAEHRKLRLVCKRWYRLLAGNFFYSL 121
Query: 184 RERIGAAEDLIFLVQACRGG 243
R+ +G AE+ +++++ R G
Sbjct: 122 RKSLGMAEEWVYVIKRDRDG 141
>ref|XP_004287344.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like [Fragaria
vesca subsp. vesca]
Length = 430
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +1
Query: 7 RSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLR 186
RSK RG L+PGLPDD+A C+ RV H LRLVC++W L+ + FY LR
Sbjct: 54 RSKPARGESSRNQSPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKKWYRLLAGNFFYSLR 113
Query: 187 ERIGAAEDLIFLVQACRGG 243
+ IG AE+ I+L++ R G
Sbjct: 114 KSIGIAEEWIYLIKRDRDG 132
>ref|NP_566009.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
gi|75099817|sp|O80582.2|FBK46_ARATH RecName:
Full=F-box/kelch-repeat protein At2g44130
gi|18650632|gb|AAL75886.1| At2g44130/F6E13.26
[Arabidopsis thaliana] gi|20197073|gb|AAC23417.2|
expressed protein [Arabidopsis thaliana]
gi|21700857|gb|AAM70552.1| At2g44130/F6E13.26
[Arabidopsis thaliana] gi|330255288|gb|AEC10382.1|
F-box/kelch-repeat protein [Arabidopsis thaliana]
Length = 409
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/73 (46%), Positives = 48/73 (65%)
Frame = +1
Query: 10 SKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRLRE 189
SK++ G +C+ ELIPGLP ++A +C+ RV +F S +R VCR WR L++ S F + R
Sbjct: 6 SKKKGGDFQQCH-ELIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERR 64
Query: 190 RIGAAEDLIFLVQ 228
R G E L+ LVQ
Sbjct: 65 RCGKTELLLCLVQ 77
>ref|XP_006354154.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like [Solanum
tuberosum]
Length = 437
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +1
Query: 4 HRSKRQRGGHMECYRELIPGLPDDIASDCIARVTVRFHSGLRLVCRRWRDLVTASDFYRL 183
H++K R L+PGLPDD+A C+ RV H+ LRLVC+RW L+ + FY L
Sbjct: 61 HKTKNSRRERSRVQSPLLPGLPDDLAIACLIRVPRVEHNKLRLVCKRWYRLLAGNFFYSL 120
Query: 184 RERIGAAEDLIFLVQACRGG 243
R+ +G AE+ +++++ R G
Sbjct: 121 RKSLGMAEEWVYVIKRDRDG 140