BLASTX nr result

ID: Zingiber23_contig00027970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00027970
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW27193.1| hypothetical protein PHAVU_003G181800g [Phaseolus...    58   1e-06
gb|AGH18689.1| PHD-finger family protein [Triticum monococcum]         58   1e-06
ref|XP_006485719.1| PREDICTED: uncharacterized protein LOC102630...    57   2e-06
ref|XP_006440830.1| hypothetical protein CICLE_v10019179mg [Citr...    57   2e-06
ref|XP_006354741.1| PREDICTED: PHD and RING finger domain-contai...    57   3e-06
gb|EXB89099.1| PHD and RING finger domain-containing protein 1 [...    56   6e-06
dbj|BAK03897.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   6e-06
ref|XP_004301094.1| PREDICTED: uncharacterized protein LOC101292...    55   7e-06
gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays]         55   1e-05
emb|CBI39562.3| unnamed protein product [Vitis vinifera]               55   1e-05
ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240...    55   1e-05
ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|1956...    55   1e-05

>gb|ESW27193.1| hypothetical protein PHAVU_003G181800g [Phaseolus vulgaris]
          Length = 609

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +1

Query: 196 CGICFSGSGRSVRGRIDCCDHYFCFVCIM 282
           CGIC++G G S+ G IDCC HYFCFVCIM
Sbjct: 31  CGICYAGRGVSIAGEIDCCSHYFCFVCIM 59


>gb|AGH18689.1| PHD-finger family protein [Triticum monococcum]
          Length = 939

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/64 (46%), Positives = 38/64 (59%)
 Frame = +1

Query: 91  KGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSGRSVRGRIDCCDHYFCF 270
           KGKA+++    D  E  AA  E V           CGICF+ S R++RG +DCC H+FCF
Sbjct: 17  KGKARMD----DDAEAVAAAPEGVP----------CGICFTDSRRAIRGELDCCAHHFCF 62

Query: 271 VCIM 282
           VCIM
Sbjct: 63  VCIM 66


>ref|XP_006485719.1| PREDICTED: uncharacterized protein LOC102630473 [Citrus sinensis]
          Length = 673

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 190 QTCGICFSGSGRSVRGRIDCCDHYFCFVCIM 282
           ++CGIC    G+S+RG+ID CDHYFCFVCIM
Sbjct: 7   RSCGICLMDEGKSIRGQIDSCDHYFCFVCIM 37


>ref|XP_006440830.1| hypothetical protein CICLE_v10019179mg [Citrus clementina]
           gi|557543092|gb|ESR54070.1| hypothetical protein
           CICLE_v10019179mg [Citrus clementina]
          Length = 669

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 190 QTCGICFSGSGRSVRGRIDCCDHYFCFVCIM 282
           ++CGIC    G+S+RG+ID CDHYFCFVCIM
Sbjct: 7   RSCGICLMDEGKSIRGQIDSCDHYFCFVCIM 37


>ref|XP_006354741.1| PREDICTED: PHD and RING finger domain-containing protein
           C126.07c-like [Solanum tuberosum]
          Length = 650

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
 Frame = +1

Query: 64  PLKRLKTLEKGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSGRS---VR 234
           P KR+KTL  G  +      D G+     S+             CGIC + +G     +R
Sbjct: 15  PSKRVKTLTLGSPESSPSSSDKGKSKLELSDS------ETESNCCGICLTETGHGTTIIR 68

Query: 235 GRIDCCDHYFCFVCIM 282
           G IDCCDHYFCFVCI+
Sbjct: 69  GVIDCCDHYFCFVCII 84


>gb|EXB89099.1| PHD and RING finger domain-containing protein 1 [Morus notabilis]
          Length = 654

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
 Frame = +1

Query: 64  PLKRLKT---LEKGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSGRSVR 234
           P KRLKT    +   +K ++K  D  E+ A  +E           + C ICF    +++R
Sbjct: 12  PSKRLKTGVSTQSQSSKCKSKLED--ENQAPVAEN-------SASRNCAICFLEDVKAIR 62

Query: 235 GRIDCCDHYFCFVCIM 282
           G IDCCDHYFCF+CIM
Sbjct: 63  GEIDCCDHYFCFLCIM 78


>dbj|BAK03897.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 948

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +1

Query: 196 CGICFSGSGRSVRGRIDCCDHYFCFVCIM 282
           CGICF+ S R++RG +DCC H+FCFVCIM
Sbjct: 40  CGICFTDSRRAIRGELDCCAHHFCFVCIM 68


>ref|XP_004301094.1| PREDICTED: uncharacterized protein LOC101292906 [Fragaria vesca
           subsp. vesca]
          Length = 1002

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/72 (38%), Positives = 37/72 (51%)
 Frame = +1

Query: 64  PLKRLKTLEKGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSGRSVRGRI 243
           P KRLKTL     ++E++P            +            C ICF   G++ RG+I
Sbjct: 11  PNKRLKTLNP---QIESQP-------DPNQPETPPETDDSPPDRCAICFLDDGKAARGKI 60

Query: 244 DCCDHYFCFVCI 279
           DCCDHYFCF+CI
Sbjct: 61  DCCDHYFCFLCI 72


>gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays]
          Length = 661

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/64 (42%), Positives = 37/64 (57%)
 Frame = +1

Query: 91  KGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSGRSVRGRIDCCDHYFCF 270
           KGK K++ +     ED A  +EK+           CGIC+    R++RG +DCC H+FCF
Sbjct: 19  KGKGKMDEEE----EDEAEGAEKM-----------CGICYLDGRRAIRGELDCCAHFFCF 63

Query: 271 VCIM 282
           VCIM
Sbjct: 64  VCIM 67


>emb|CBI39562.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +1

Query: 70  KRLKTLEKGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSG-RSVRGRID 246
           +R   + KGK KVE    ++G+                  Q CGIC S  G R VRG +D
Sbjct: 14  ERKPPVRKGKEKVEDVKNEVGK------------------QVCGICLSEEGKRRVRGTLD 55

Query: 247 CCDHYFCFVCIM 282
           CC HYFCF CIM
Sbjct: 56  CCSHYFCFGCIM 67


>ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera]
          Length = 733

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +1

Query: 70  KRLKTLEKGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSG-RSVRGRID 246
           +R   + KGK KVE    ++G+                  Q CGIC S  G R VRG +D
Sbjct: 233 ERKPPVRKGKEKVEDVKNEVGK------------------QVCGICLSEEGKRRVRGTLD 274

Query: 247 CCDHYFCFVCIM 282
           CC HYFCF CIM
Sbjct: 275 CCSHYFCFGCIM 286


>ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|195646974|gb|ACG42955.1|
           PHD-finger family protein [Zea mays]
           gi|413953705|gb|AFW86354.1| PHD-finger family protein
           [Zea mays]
          Length = 733

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/64 (42%), Positives = 37/64 (57%)
 Frame = +1

Query: 91  KGKAKVETKPWDIGEDYAAFSEKVXXXXXXXXXQTCGICFSGSGRSVRGRIDCCDHYFCF 270
           KGK K++ +     ED A  +EK+           CGIC+    R++RG +DCC H+FCF
Sbjct: 19  KGKGKMDEEE----EDEAEGAEKM-----------CGICYLDGRRAIRGELDCCAHFFCF 63

Query: 271 VCIM 282
           VCIM
Sbjct: 64  VCIM 67


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