BLASTX nr result
ID: Zingiber23_contig00027922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00027922
(218 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor... 82 7e-14
gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus... 82 1e-13
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu... 81 2e-13
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor... 80 2e-13
emb|CBI31157.3| unnamed protein product [Vitis vinifera] 80 2e-13
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor... 80 2e-13
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera] 80 2e-13
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor... 80 3e-13
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor... 80 3e-13
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor... 80 4e-13
gb|EXB44282.1| putative pre-mRNA-splicing factor ATP-dependent R... 79 5e-13
ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor... 79 6e-13
ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citr... 79 6e-13
gb|EMJ14920.1| hypothetical protein PRUPE_ppa000417mg [Prunus pe... 79 6e-13
ref|XP_004243751.1| PREDICTED: probable pre-mRNA-splicing factor... 79 6e-13
ref|XP_006374312.1| ATP-dependent RNA helicase family protein [P... 79 8e-13
ref|XP_006290254.1| hypothetical protein CARUB_v10016599mg [Caps... 79 8e-13
ref|XP_006282108.1| hypothetical protein CARUB_v10028356mg [Caps... 79 8e-13
ref|XP_004306870.1| PREDICTED: probable pre-mRNA-splicing factor... 79 8e-13
ref|XP_002331832.1| predicted protein [Populus trichocarpa] 79 8e-13
>ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Cicer arietinum]
gi|502123536|ref|XP_004498155.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Cicer arietinum]
gi|502123538|ref|XP_004498156.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X3 [Cicer arietinum]
gi|502123540|ref|XP_004498157.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X4 [Cicer arietinum]
gi|502123542|ref|XP_004498158.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X5 [Cicer arietinum]
gi|502123544|ref|XP_004498159.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X6 [Cicer arietinum]
gi|502123546|ref|XP_004498160.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X7 [Cicer arietinum]
gi|502123548|ref|XP_004498161.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X8 [Cicer arietinum]
Length = 1178
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +3
Query: 36 VVMETLKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
+ + LK+LE LSL+S +CTELESH G+GDK+LAEFI DLG +SETV++F+ KLKE GA
Sbjct: 5 IPQDGLKKLEYLSLVSKVCTELESHTGAGDKVLAEFITDLGHSSETVEEFDAKLKENGA 63
>gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus vulgaris]
Length = 1201
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/54 (70%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +CTELESH G+GDK+LAEFI +LGR+SE V+DF+ KLKE GA
Sbjct: 10 LKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEDFDAKLKENGA 63
>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1177
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/54 (68%), Positives = 48/54 (88%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
L+ LE LSL+S +CTELESH+G GDK+LAE+I ++GRNSETVD+F++KLKE GA
Sbjct: 16 LERLEFLSLVSKVCTELESHLGFGDKVLAEYITEMGRNSETVDEFDSKLKENGA 69
>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Vitis vinifera]
Length = 1172
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +CTELE+H+G GDK+LAEFI D+GR ETVD+F++KLKE GA
Sbjct: 10 LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 63
>emb|CBI31157.3| unnamed protein product [Vitis vinifera]
Length = 803
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +CTELE+H+G GDK+LAEFI D+GR ETVD+F++KLKE GA
Sbjct: 49 LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 102
>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 2 [Vitis vinifera]
Length = 1175
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +CTELE+H+G GDK+LAEFI D+GR ETVD+F++KLKE GA
Sbjct: 10 LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 63
>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
Length = 1162
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +CTELE+H+G GDK+LAEFI D+GR ETVD+F++KLKE GA
Sbjct: 10 LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 63
>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cucumis sativus]
Length = 1181
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/59 (61%), Positives = 51/59 (86%)
Frame = +3
Query: 36 VVMETLKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
+V E +K+LE LSL+S +C+ELE+H+G GDK+LAEFI ++GR+ E+VD+F+TKLKE GA
Sbjct: 1 MVKEDIKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKLKENGA 59
>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Glycine max]
gi|571512325|ref|XP_006596566.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Glycine max]
Length = 1203
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +CTELESH G+GDK+LAEFI +LGR+SE V++F+ KLKE GA
Sbjct: 10 LKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDAKLKENGA 63
>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Glycine max]
gi|571539750|ref|XP_006601342.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Glycine max]
Length = 1197
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +CTELESH G+GDK+LAEFI +LGR+SE V++F+ KLKE GA
Sbjct: 10 LKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDEKLKENGA 63
>gb|EXB44282.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 1205
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/56 (64%), Positives = 48/56 (85%)
Frame = +3
Query: 45 ETLKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
E LK+LE LSL+S +CTELE+H+G GDK+LAEFI ++G+N +TVD+F+ KLKE GA
Sbjct: 6 EGLKKLEYLSLVSKVCTELENHLGFGDKVLAEFITEMGQNCDTVDEFDAKLKENGA 61
>ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Citrus sinensis]
gi|568825052|ref|XP_006466903.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Citrus sinensis]
Length = 1176
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE SL+S +C+ELE+H+G GDK+LAEFI +LGRN ETVD+F++KLKE GA
Sbjct: 10 LKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
>ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citrus clementina]
gi|557527537|gb|ESR38787.1| hypothetical protein
CICLE_v10024740mg [Citrus clementina]
Length = 1176
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE SL+S +C+ELE+H+G GDK+LAEFI +LGRN ETVD+F++KLKE GA
Sbjct: 10 LKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
>gb|EMJ14920.1| hypothetical protein PRUPE_ppa000417mg [Prunus persica]
Length = 1198
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +C+ELE+H+G GDK+LAEFI +LGR ETVD+F+TKLK+ GA
Sbjct: 11 LKKLEYLSLVSKVCSELETHIGVGDKVLAEFITELGRKCETVDEFDTKLKKNGA 64
>ref|XP_004243751.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Solanum lycopersicum]
Length = 1190
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/54 (66%), Positives = 46/54 (85%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +C+ELE+H+G GDK+LAEFI +LGRN TVD+F+ KLKE GA
Sbjct: 10 LKKLEYLSLISKVCSELEAHLGFGDKVLAEFITELGRNCSTVDEFDAKLKESGA 63
>ref|XP_006374312.1| ATP-dependent RNA helicase family protein [Populus trichocarpa]
gi|550322071|gb|ERP52109.1| ATP-dependent RNA helicase
family protein [Populus trichocarpa]
Length = 1177
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +C+ELE+H+G GDKILAEFI +LGR+ ETVD+F+ KLKE GA
Sbjct: 11 LKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKENGA 64
>ref|XP_006290254.1| hypothetical protein CARUB_v10016599mg [Capsella rubella]
gi|482558961|gb|EOA23152.1| hypothetical protein
CARUB_v10016599mg [Capsella rubella]
Length = 1174
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = +3
Query: 45 ETLKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
E L +L LSL+SN+C ELE+H+GS +K+LAEFI DLGR+SETVD+F+ KLK+ GA
Sbjct: 4 EELNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKKLKDEGA 59
>ref|XP_006282108.1| hypothetical protein CARUB_v10028356mg [Capsella rubella]
gi|482550812|gb|EOA15006.1| hypothetical protein
CARUB_v10028356mg [Capsella rubella]
Length = 923
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
+++L LSL+SN+C ELE+H+GSG+K LAEFI DLGR+SETVD+F+ KLK+ GA
Sbjct: 1 MEKLNHLSLVSNVCNELETHIGSGEKYLAEFIIDLGRHSETVDEFDNKLKDEGA 54
>ref|XP_004306870.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Fragaria vesca subsp. vesca]
Length = 1203
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/54 (64%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +C+ELE+H+G GDK+LAEFI ++GRN E+VD+F+ KLKE GA
Sbjct: 8 LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCESVDEFDAKLKEHGA 61
>ref|XP_002331832.1| predicted protein [Populus trichocarpa]
Length = 1171
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = +3
Query: 51 LKELERLSLLSNICTELESHVGSGDKILAEFIADLGRNSETVDDFETKLKEFGA 212
LK+LE LSL+S +C+ELE+H+G GDKILAEFI +LGR+ ETVD+F+ KLKE GA
Sbjct: 11 LKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKENGA 64