BLASTX nr result

ID: Zingiber23_contig00027840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00027840
         (589 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381130.1| hypothetical protein POPTR_0006s06720g, part...    61   3e-07
ref|XP_004965928.1| PREDICTED: cell wall protein AWA1-like [Seta...    61   3e-07
ref|XP_002527202.1| hypothetical protein RCOM_1075930 [Ricinus c...    56   6e-06

>ref|XP_006381130.1| hypothetical protein POPTR_0006s06720g, partial [Populus
           trichocarpa] gi|550335652|gb|ERP58927.1| hypothetical
           protein POPTR_0006s06720g, partial [Populus trichocarpa]
          Length = 406

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
 Frame = -1

Query: 589 CWPGAIVENNETHLPLKTSRSKVEPFSSRRAPYSGSIFSKAK-----FQDGGERRRTQTV 425
           CWPGA V+     +  ++ R +  P    R PYS + +SK+K      Q   +R    T 
Sbjct: 64  CWPGATVQYQHGFMTPQSQRERFGPRIFPRTPYSRTSYSKSKSQLLHLQGDNDRHVNMTS 123

Query: 424 SSFGWKESSTALSGITVPP---------------KYDASTPSK------ELLDS----NL 320
           S F   ++     G TV                 K+ A +PS+        LDS    NL
Sbjct: 124 SPFQQSQTPVMDRGKTVYDGHGSVGPIQRTRIQLKFVAESPSRGSANYHSTLDSPQVENL 183

Query: 319 AIFSSTPSSIPNAMKNLSSTWKANYVPPKSSQAAMKILEHLNKTIPSPKEK 167
             F    S      K  SS      VPP S Q A KILEHL+  +P+PKEK
Sbjct: 184 KAFEGLFSD----SKPQSSEVGVAIVPPYSRQVAQKILEHLDSNLPTPKEK 230


>ref|XP_004965928.1| PREDICTED: cell wall protein AWA1-like [Setaria italica]
          Length = 632

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
 Frame = -1

Query: 589 CWPGAIVENNETHLPLKTSRSKVEPFSSRRAPYSGSIFSKA--------KFQDGGERRRT 434
           CWPG++V     +L  ++++ +  P    R PYSGS+F ++         + +   + + 
Sbjct: 257 CWPGSVVRGYPNYLTPQSNKGRALPQPLSRTPYSGSVFQRSIKSSRHSGTYNNSSGQPQL 316

Query: 433 QTVSSFGWK----ESSTALSGITVPPK------------------YDASTPSKELL---- 332
            T  S G K    +   + SG  V P                    D S  +K +     
Sbjct: 317 STPFSVGSKALVEDKLASTSGSMVQPSSSSRGQIDVFGSNTSFFPRDGSAATKSIAFNLQ 376

Query: 331 --DSNLAIFSSTPSSIPNAMKNLSSTWKANYVPPKSSQAAMKILEHLNKTIPSPKEKLIH 158
             D    I S   S   +A+ N+S     + V PKSS+ A KIL+HL +TIPSP  K + 
Sbjct: 377 GPDGKSTIESRATSGHTSAVDNISRGASVS-VHPKSSETAFKILQHLERTIPSPTLKPLD 435

Query: 157 ANPEVLEIKSFSNFATD 107
              + L  ++ S+ AT+
Sbjct: 436 LR-QTLAKRNASSVATN 451


>ref|XP_002527202.1| hypothetical protein RCOM_1075930 [Ricinus communis]
           gi|223533467|gb|EEF35215.1| hypothetical protein
           RCOM_1075930 [Ricinus communis]
          Length = 731

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
 Frame = -1

Query: 589 CWPGAIVENNETHLPLKTSRSKVEPFSSRRAPYSGSIFSKAKFQDGGERRRTQTVSSF-- 416
           CWPGA VE+   ++  ++ R +    +  R PYS SI++K K +  G        S++  
Sbjct: 314 CWPGASVEDQRGYMTPQSQRGRFGLHNFPRTPYSRSIYTKTKSRVCGSVETPSRGSAYFH 373

Query: 415 -----GWKESSTALSGITVPPKYDASTPSKELLDSNLAIFSSTPSSIPNAM--KNLSSTW 257
                G  E+ +   G+   P  +             +I S   SS  + +  K   S  
Sbjct: 374 SPLNGGQVENFSVSEGLFSAPWTNLENRVTNSSAKVQSIGSKAQSSEVSVLISKPQCSEV 433

Query: 256 KANYVPPKSSQAAMKILEHLNKTIPSPKEK 167
               VP  SSQ A KILEHL +  P+PK+K
Sbjct: 434 SVPTVPAHSSQVAKKILEHLERNPPTPKDK 463


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