BLASTX nr result

ID: Zingiber23_contig00027793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00027793
         (244 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355967.1| PREDICTED: RING-H2 finger protein ATL46-like...   105   6e-21
ref|XP_004238684.1| PREDICTED: RING-H2 finger protein ATL46-like...   105   6e-21
ref|XP_006305918.1| hypothetical protein CARUB_v10011135mg [Caps...   104   1e-20
ref|XP_002517366.1| ring finger protein, putative [Ricinus commu...   104   1e-20
ref|XP_006416042.1| hypothetical protein EUTSA_v10007961mg [Eutr...   104   1e-20
ref|XP_002324007.2| hypothetical protein POPTR_0017s10860g [Popu...   104   1e-20
gb|AAF87153.1|AC002423_18 T23E23.15 [Arabidopsis thaliana]            104   1e-20
ref|NP_173809.1| RING-H2 finger protein ATL47 [Arabidopsis thali...   104   1e-20
ref|XP_006338542.1| PREDICTED: RING-H2 finger protein ATL46-like...   102   5e-20
ref|XP_004232284.1| PREDICTED: RING-H2 finger protein ATL46-like...   102   5e-20
ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...   102   5e-20
ref|XP_002893314.1| hypothetical protein ARALYDRAFT_472661 [Arab...   102   5e-20
emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]   102   5e-20
gb|EXB82630.1| RING-H2 finger protein ATL46 [Morus notabilis]         102   7e-20
ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   102   7e-20
ref|XP_006483811.1| PREDICTED: RING-H2 finger protein ATL47-like...   101   9e-20
ref|XP_006438441.1| hypothetical protein CICLE_v10031917mg [Citr...   101   9e-20
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...   101   9e-20
ref|XP_006603823.1| PREDICTED: RING-H2 finger protein ATL46-like...   101   1e-19
gb|EMJ16759.1| hypothetical protein PRUPE_ppa007393mg [Prunus pe...   101   1e-19

>ref|XP_006355967.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum tuberosum]
          Length = 369

 Score =  105 bits (262), Expect = 6e-21
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = +3

Query: 54  DPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRL 233
           D GT QRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDCAVCL EF+ +D+LRL
Sbjct: 85  DSGTYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEQDELRL 144

Query: 234 LP 239
           LP
Sbjct: 145 LP 146


>ref|XP_004238684.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
          Length = 370

 Score =  105 bits (262), Expect = 6e-21
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = +3

Query: 54  DPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRL 233
           D GT QRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDCAVCL EF+ +D+LRL
Sbjct: 85  DSGTYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEQDELRL 144

Query: 234 LP 239
           LP
Sbjct: 145 LP 146


>ref|XP_006305918.1| hypothetical protein CARUB_v10011135mg [Capsella rubella]
           gi|482574629|gb|EOA38816.1| hypothetical protein
           CARUB_v10011135mg [Capsella rubella]
          Length = 383

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/79 (64%), Positives = 62/79 (78%)
 Frame = +3

Query: 3   AAAAASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPF 182
           ++ ++SP  + R     D  T QRQLQQLFH+HDSGLDQA IDALP+FLY EI G+K+PF
Sbjct: 89  SSLSSSPNESDRNPEFPDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPF 148

Query: 183 DCAVCLAEFAPEDKLRLLP 239
           DCAVCL EF+ +DKLRLLP
Sbjct: 149 DCAVCLCEFSEDDKLRLLP 167


>ref|XP_002517366.1| ring finger protein, putative [Ricinus communis]
           gi|223543377|gb|EEF44908.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/79 (64%), Positives = 61/79 (77%)
 Frame = +3

Query: 3   AAAAASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPF 182
           +++A+S    R   + G P  LQRQLQQLFH+HDSGLDQA IDALP+F Y EI+G K+PF
Sbjct: 88  SSSASSQSNNRYPEISG-PDALQRQLQQLFHLHDSGLDQAFIDALPVFQYREIVGLKEPF 146

Query: 183 DCAVCLAEFAPEDKLRLLP 239
           DCAVCL EF  +DKLRLLP
Sbjct: 147 DCAVCLCEFTEKDKLRLLP 165


>ref|XP_006416042.1| hypothetical protein EUTSA_v10007961mg [Eutrema salsugineum]
           gi|557093813|gb|ESQ34395.1| hypothetical protein
           EUTSA_v10007961mg [Eutrema salsugineum]
          Length = 372

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = +3

Query: 54  DPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRL 233
           D  T QRQLQQLFH+HDSGLDQA IDALP+FLY EI GSK+PFDCAVCL EF+ +DKLRL
Sbjct: 96  DSETYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGSKEPFDCAVCLCEFSEDDKLRL 155

Query: 234 LP 239
           LP
Sbjct: 156 LP 157


>ref|XP_002324007.2| hypothetical protein POPTR_0017s10860g [Populus trichocarpa]
           gi|550319999|gb|EEF04140.2| hypothetical protein
           POPTR_0017s10860g [Populus trichocarpa]
          Length = 371

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
 Frame = +3

Query: 15  ASPMRTRRARLPGDPGT--LQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDC 188
           AS   ++  R PG  G+  LQRQLQQLFH+HDSGLDQA IDALP+F Y EI+G K+PFDC
Sbjct: 84  ASSASSQSNRYPGISGSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDC 143

Query: 189 AVCLAEFAPEDKLRLLP 239
           AVCL EF+ +DKLRLLP
Sbjct: 144 AVCLCEFSEKDKLRLLP 160


>gb|AAF87153.1|AC002423_18 T23E23.15 [Arabidopsis thaliana]
          Length = 406

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/76 (65%), Positives = 60/76 (78%)
 Frame = +3

Query: 12  AASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCA 191
           ++SP  + +     D  T QRQLQQLFH+HDSGLDQA IDALP+FLY EI G+K+PFDCA
Sbjct: 123 SSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCA 182

Query: 192 VCLAEFAPEDKLRLLP 239
           VCL EF+ +DKLRLLP
Sbjct: 183 VCLCEFSEDDKLRLLP 198


>ref|NP_173809.1| RING-H2 finger protein ATL47 [Arabidopsis thaliana]
           gi|68565197|sp|Q8GW38.1|ATL47_ARATH RecName:
           Full=RING-H2 finger protein ATL47
           gi|26453199|dbj|BAC43674.1| unknown protein [Arabidopsis
           thaliana] gi|33942043|gb|AAQ55274.1| At1g23980
           [Arabidopsis thaliana] gi|332192342|gb|AEE30463.1|
           RING-H2 finger protein ATL47 [Arabidopsis thaliana]
          Length = 369

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/76 (65%), Positives = 60/76 (78%)
 Frame = +3

Query: 12  AASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCA 191
           ++SP  + +     D  T QRQLQQLFH+HDSGLDQA IDALP+FLY EI G+K+PFDCA
Sbjct: 86  SSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCA 145

Query: 192 VCLAEFAPEDKLRLLP 239
           VCL EF+ +DKLRLLP
Sbjct: 146 VCLCEFSEDDKLRLLP 161


>ref|XP_006338542.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum tuberosum]
          Length = 392

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/58 (79%), Positives = 53/58 (91%)
 Frame = +3

Query: 66  LQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRLLP 239
           LQRQLQQLFH+HDSGLDQA IDALP+FLY E++G K+PFDCAVCL EF+ +DKLRLLP
Sbjct: 121 LQRQLQQLFHLHDSGLDQAFIDALPVFLYKEVVGPKEPFDCAVCLCEFSDKDKLRLLP 178


>ref|XP_004232284.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
          Length = 390

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/58 (79%), Positives = 53/58 (91%)
 Frame = +3

Query: 66  LQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRLLP 239
           LQRQLQQLFH+HDSGLDQA IDALP+FLY E++G K+PFDCAVCL EF+ +DKLRLLP
Sbjct: 121 LQRQLQQLFHLHDSGLDQAFIDALPVFLYKEVVGPKEPFDCAVCLCEFSDKDKLRLLP 178


>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 66  LQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRLLP 239
           LQRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDCAVCL EF+ +DKLRLLP
Sbjct: 129 LQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 186


>ref|XP_002893314.1| hypothetical protein ARALYDRAFT_472661 [Arabidopsis lyrata subsp.
           lyrata] gi|297339156|gb|EFH69573.1| hypothetical protein
           ARALYDRAFT_472661 [Arabidopsis lyrata subsp. lyrata]
          Length = 381

 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = +3

Query: 3   AAAAASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPF 182
           ++ ++SP  + +     +  T QRQLQQLFH+HDSGLDQA IDALP+FLY EI G+K+PF
Sbjct: 83  SSLSSSPNESDQNPEFSESDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPF 142

Query: 183 DCAVCLAEFAPEDKLRLLP 239
           DCAVCL EF+ +DKLRLLP
Sbjct: 143 DCAVCLCEFSEDDKLRLLP 161


>emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
          Length = 1090

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 66  LQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRLLP 239
           LQRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDCAVCL EF+ +DKLRLLP
Sbjct: 822 LQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 879


>gb|EXB82630.1| RING-H2 finger protein ATL46 [Morus notabilis]
          Length = 405

 Score =  102 bits (253), Expect = 7e-20
 Identities = 48/77 (62%), Positives = 58/77 (75%)
 Frame = +3

Query: 9   AAASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDC 188
           +++S   + R     +    QRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDC
Sbjct: 86  SSSSVSESNRYPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIMGLKEPFDC 145

Query: 189 AVCLAEFAPEDKLRLLP 239
           AVCL EF  +DKLRLLP
Sbjct: 146 AVCLCEFTEQDKLRLLP 162


>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  102 bits (253), Expect = 7e-20
 Identities = 48/77 (62%), Positives = 60/77 (77%)
 Frame = +3

Query: 9   AAASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDC 188
           +++S  ++ R +        QRQLQQLFH+HDSGLDQA IDALP+FLY +I+G K+PFDC
Sbjct: 87  SSSSISQSNRYQETSSSHAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKDIVGLKEPFDC 146

Query: 189 AVCLAEFAPEDKLRLLP 239
           AVCL EF+ EDKLRLLP
Sbjct: 147 AVCLCEFSQEDKLRLLP 163


>ref|XP_006483811.1| PREDICTED: RING-H2 finger protein ATL47-like isoform X1 [Citrus
           sinensis] gi|568860616|ref|XP_006483812.1| PREDICTED:
           RING-H2 finger protein ATL47-like isoform X2 [Citrus
           sinensis]
          Length = 388

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = +3

Query: 69  QRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRLLP 239
           QRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDCAVCL EF+ +DKLRLLP
Sbjct: 117 QRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLP 173


>ref|XP_006438441.1| hypothetical protein CICLE_v10031917mg [Citrus clementina]
           gi|557540637|gb|ESR51681.1| hypothetical protein
           CICLE_v10031917mg [Citrus clementina]
          Length = 360

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = +3

Query: 69  QRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRLLP 239
           QRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDCAVCL EF+ +DKLRLLP
Sbjct: 89  QRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLP 145


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/58 (79%), Positives = 53/58 (91%)
 Frame = +3

Query: 69  QRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDCAVCLAEFAPEDKLRLLPA 242
           QRQLQQLFH+HDSGLDQA IDALP+FLY EI+G K+PFDCAVCL E++ +DKLRLLPA
Sbjct: 104 QRQLQQLFHLHDSGLDQAFIDALPVFLYKEIMGLKEPFDCAVCLCEYSEKDKLRLLPA 161


>ref|XP_006603823.1| PREDICTED: RING-H2 finger protein ATL46-like isoform X2 [Glycine
           max] gi|571553406|ref|XP_006603824.1| PREDICTED: RING-H2
           finger protein ATL46-like isoform X3 [Glycine max]
           gi|571553408|ref|XP_003553922.2| PREDICTED: RING-H2
           finger protein ATL46-like isoformX1 [Glycine max]
           gi|571553412|ref|XP_006603825.1| PREDICTED: RING-H2
           finger protein ATL46-like isoform X4 [Glycine max]
           gi|571553416|ref|XP_006603826.1| PREDICTED: RING-H2
           finger protein ATL46-like isoform X5 [Glycine max]
          Length = 405

 Score =  101 bits (251), Expect = 1e-19
 Identities = 49/77 (63%), Positives = 58/77 (75%)
 Frame = +3

Query: 9   AAASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPFDC 188
           ++AS     R +       LQRQLQQLFH+HDSGLDQA IDALP+F Y EI+G K+PFDC
Sbjct: 111 SSASAQSNNRHQELSTSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDC 170

Query: 189 AVCLAEFAPEDKLRLLP 239
           AVCL EF+ +DKLRLLP
Sbjct: 171 AVCLCEFSEKDKLRLLP 187


>gb|EMJ16759.1| hypothetical protein PRUPE_ppa007393mg [Prunus persica]
          Length = 369

 Score =  101 bits (251), Expect = 1e-19
 Identities = 49/79 (62%), Positives = 61/79 (77%)
 Frame = +3

Query: 3   AAAAASPMRTRRARLPGDPGTLQRQLQQLFHIHDSGLDQAHIDALPLFLYAEILGSKDPF 182
           +++A+SP   R   L      LQRQLQQLFH+HDSGLDQA IDALP+F Y +I+G K+PF
Sbjct: 80  SSSASSPQSNRYPEL-STSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYRDIVGLKEPF 138

Query: 183 DCAVCLAEFAPEDKLRLLP 239
           DC+VCL EF+ +DKLRLLP
Sbjct: 139 DCSVCLCEFSEKDKLRLLP 157


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