BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00027618
         (3035 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              649   0.0  
ref|XP_004955617.1| PREDICTED: MMS19 nucleotide excision repair ...   619   e-174
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   595   e-167
ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [A...   593   e-166
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...   592   e-166
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...   591   e-166
ref|XP_003561357.1| PREDICTED: uncharacterized protein LOC100836...   587   e-164
gb|EEC81606.1| hypothetical protein OsI_25098 [Oryza sativa Indi...   587   e-164
tpg|DAA59748.1| TPA: hypothetical protein ZEAMMB73_472050 [Zea m...   587   e-164
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   580   e-162
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ...   566   e-158
gb|EOY26932.1| MMS19 nucleotide excision repair protein, putativ...   564   e-158
gb|EMT20655.1| MMS19 nucleotide excision repair protein-like pro...   557   e-156
gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus pe...   555   e-155
gb|EEE66671.1| hypothetical protein OsJ_23303 [Oryza sativa Japo...   552   e-154
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   551   e-154
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ...   550   e-153
gb|EMS62733.1| MMS19 nucleotide excision repair protein-like pro...   539   e-150
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu...   537   e-149
ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304...   537   e-149

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  649 bits (1673), Expect = 0.0
 Identities = 403/935 (43%), Positives = 553/935 (59%), Gaps = 35/935 (3%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            + +D+KR+DLS+ LM A                                  ++CL  YG 
Sbjct: 236  EDVDVKRDDLSRALMLAFSSTTLFEPFAIPLLLEKLSSSLPLAKVDSLKYLSNCLLKYGD 295

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLT--DELDVDMKSEVNQIRMEALNCLETALSCF 358
             RM KH   IW ++K+ IF  S + P+L+   EL   +  + N+I  EA+  L+  +   
Sbjct: 296  DRMTKHVEAIWFSVKDAIF-CSEQEPMLSLASELLDHVGFQENEIVTEAIILLQKVIL-- 352

Query: 359  DSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCC 538
                    L LI+ D DI T + ++TS  SY+    + +  L AIG I    AK SI CC
Sbjct: 353  --ENSGLSLSLIVGDKDINTIVNTVTSFRSYNDIPLQSKHKLCAIGRILYVSAKASITCC 410

Query: 539  NKVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGG-MNFGAXXXXXXXXXXXXXXXXXX 715
            N+VF  FF  LMD LG+S  +SS  C+ N   V    +NFGA                  
Sbjct: 411  NRVFESFFFRLMDTLGLSVRNSSGDCLPNFDYVFSERLNFGALYLCIELLAACRDLVVGS 470

Query: 716  N-IAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLST 892
              + ++ ++  +SW  ML SFS  L     SVL +S T   A E + +   VKGL+ L+T
Sbjct: 471  EELTSKSVSAQESWCCMLHSFSSLLMKAFSSVLDAS-TDKDAYEAD-IYSGVKGLQILAT 528

Query: 893  FPSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGI 1072
            FP    PIS+  +E+VL   +SII    ++T LW L+LKALVQIG +I+    H+S + +
Sbjct: 529  FPGEFLPISKSIFENVLLTFISIIVEDFNKTLLWKLALKALVQIGSFIDRF--HESEKAL 586

Query: 1073 CYNK-VVEKILSMLQTNDSTVSLSLKLVAISEIANVGQYV-LSIIRALEDAIISSLVAC- 1243
             YN  VVEKI+S++  +D  +   L+L AIS+I   G  V L I++ LEDAI ++L    
Sbjct: 587  SYNYIVVEKIVSLMFLDDFGLPFQLRLEAISDIGTTGLNVMLKIVQGLEDAIFANLSEVY 646

Query: 1244 IQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQ 1423
            + G LKS+   V LLECY++++LP    +G F+DV  +F++NIWNQ+EN   F+      
Sbjct: 647  VHGNLKSAKIAVQLLECYSNKLLPGIHGAGDFEDVLSRFAVNIWNQIENSMAFSVGAQEN 706

Query: 1424 KVLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLKTQPFQSIHGIIAL------- 1582
            ++L+  M  MKL V  C+  +Q  I+KKA+ V+ S           I G + L       
Sbjct: 707  ELLNATMTAMKLAVGSCSEGSQGKIIKKAYSVLSSCPSFTLMESMPITGTVQLEGLQHTQ 766

Query: 1583 -----SCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNK 1747
                 SCRDKW+ SLF S +IA+R QT + +++ +L+LF+  L +G++PAAQAL SMVNK
Sbjct: 767  DLECFSCRDKWVISLFASAIIAVRPQTHIPNIRVVLHLFMTNLLKGHVPAAQALGSMVNK 826

Query: 1748 -CPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQYNFLDRD-------ICSQRS 1903
             CP S N  EIS+  +L+ A + I    LW   ++  LK+ + +  D       +C   S
Sbjct: 827  LCPKS-NGVEISSTCTLEDALDIIFNTSLWDSHNHGPLKRCSGIGVDNEMGLANLCLSAS 885

Query: 1904 --------IVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVG 2059
                     + G+AW+GKGLL+RGHEKV +I M  ++CL+S +N++              
Sbjct: 886  NCQLLQVCAIEGLAWIGKGLLLRGHEKVKDITMIFLRCLLSKNNQE-------------- 931

Query: 2060 MEWNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGST 2239
             +   S+A SAADAFHVL++DSE CLNK+FHA IRPLYKQRFFSS+LPIL+SS+ ES  +
Sbjct: 932  QDVLPSVAKSAADAFHVLMSDSEICLNKRFHANIRPLYKQRFFSSVLPILVSSMAESRLS 991

Query: 2240 SKKIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGI 2419
            + +  LYRAL HIISDTPL AVL+E+KKIIP LLD+L+I  +    K I+Y+LLLVLSGI
Sbjct: 992  NTRSMLYRALAHIISDTPLIAVLSEAKKIIPILLDSLSILSTYNLDKDILYNLLLVLSGI 1051

Query: 2420 LMDDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVL 2599
            LMD NG+ T++EN H +I CLI L+ YP +M+VRETAIQCLVAMS LPHARI+P R +VL
Sbjct: 1052 LMDKNGQETVVENAHVIINCLIGLVGYPHMMVVRETAIQCLVAMSRLPHARIYPMRTQVL 1111

Query: 2600 KAVATALDDRKRAVRQEAVRCRQAWASIASRSLQF 2704
            ++V  ALDD KRAVR EAVRCRQAWASIASRSL F
Sbjct: 1112 RSVQKALDDPKRAVRHEAVRCRQAWASIASRSLHF 1146


>ref|XP_004955617.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Setaria
            italica]
          Length = 1129

 Score =  619 bits (1595), Expect = e-174
 Identities = 362/903 (40%), Positives = 543/903 (60%), Gaps = 9/903 (0%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D L+  R+DLS+ LM+A                                  ++C+  YG 
Sbjct: 238  DDLNATRDDLSRALMHAFCSTPYFEPFAIPLLLDKLSSSLPLAKIESLKYLDNCIRFYGT 297

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDS 364
             RMV+H+  +W  LKEVIF+ SPE  LLT     D +   NQ+ +EAL CL+TA+ C DS
Sbjct: 298  DRMVRHASAVWFKLKEVIFSSSPEEFLLTSGSPKDAEKNKNQMVLEALKCLKTAIMCIDS 357

Query: 365  SEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNK 544
            S++D F+ LI+ D DI  K+ S++S      +S E    L A+G + + +++ S Y C +
Sbjct: 358  SDKDLFINLILLDEDIVNKIHSISSEEKSILSSLEDLAQLHALGSVISILSESSTYLCTR 417

Query: 545  VFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXNIA 724
            V  + F  L+D+LG S ++ S+   T + +     N+GA                     
Sbjct: 418  VLQEHFTQLVDILGTSTDYESRQLNTCNGSSSAADNYGALYLSVQMLTSCREVALVSYAD 477

Query: 725  AEFIAESK-SWFFMLKSFSMDLCHVLGSVLRSSNTSMVAS-EKEGVLCAVKGLRSLSTFP 898
               I  +K SW+ +L+     L H LGS L   + SM +   +E V CAVKGL +L+TFP
Sbjct: 478  CSSIKLAKESWWLILEKKLDRLIHFLGSFLTIDSESMQSMFRQEYVSCAVKGLLTLATFP 537

Query: 899  SSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICY 1078
              CSP++   YED+L +L S+I  + +   LW LSLKAL  IG  I     H S + + Y
Sbjct: 538  EQCSPLTANAYEDILAMLTSVIISKFENVDLWRLSLKALTSIGSSI--GEFHASQKEVIY 595

Query: 1079 -NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVG-QYVLSIIRALEDAIISSLVACIQG 1252
               VV+KI+S++++ D  + LSL+L A  EI   G  Y+L + R+LE A++++ ++   G
Sbjct: 596  CQTVVDKIVSLVESYDGPMPLSLRLEASYEIGTAGFNYMLRVARSLEGAVVTN-ISKTNG 654

Query: 1253 GLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQKVL 1432
            G++ ++ +  L ECY+ +VLP   TSG  +++A+ F++++ ++++++++ +  +  Q +L
Sbjct: 655  GMECTEHVAHLFECYSGQVLPWLFTSGGINELALSFAMHLLDEIKDLTMLDR-IGSQGLL 713

Query: 1433 DQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFL--KTQPFQSIHG---IIALSCRDK 1597
            D +M  MKLLV  CT E Q+ I++KA+ ++ S+  L  K+  +  +     + + + ++ 
Sbjct: 714  DSLMAGMKLLVGVCTEEQQTRIVQKAYSMVSSVIPLPLKSMAYHLLSADELVPSHTVQET 773

Query: 1598 WIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCPSSINEPEI 1777
             +  +  SV++ LR QTP  DM  ++NLF + L  G LPAA ALAS+ NK    ++ PE 
Sbjct: 774  ALVGMLSSVIVGLRPQTPAPDMVVMINLFTVFLLNGKLPAAYALASVFNKY---LHNPEF 830

Query: 1778 SARLSLDQACEDILKLCLWTLESNSHLKQYNFLDRDICSQRSIVLGMAWVGKGLLMRGHE 1957
            S    LD+  + IL+ C  T+ +++  K       ++ S+  I+ G+AW+GKGLLMRG E
Sbjct: 831  SHENQLDKILDGILERCFSTVLASNQSKISQ--SGNVLSKIDILSGLAWIGKGLLMRGDE 888

Query: 1958 KVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSLATSAADAFHVLLNDSEDCL 2137
            KV +I+MFL+KCL SD  E +      E    V    N+S+ATSAA AFHV+++DSE CL
Sbjct: 889  KVKDISMFLLKCLCSD--ETLATIPSHEEESYVNDSSNTSIATSAAGAFHVMMSDSEVCL 946

Query: 2138 NKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYRALGHIISDTPLAAVLAES 2317
            NKKFHA I+PLYKQRFFS M+PI LS IKE+ S + K+ALYRA GHIIS+ P+ AV+ E+
Sbjct: 947  NKKFHARIKPLYKQRFFSIMMPIFLSKIKEATSMTTKLALYRAFGHIISNAPVPAVITEA 1006

Query: 2318 KKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKVTILENIHTVIECLIKLIS 2497
             +I+  ++D+LA    +   K +VY+LLLVLSG+LMD+ GK  IL+N+H  I  L +L+S
Sbjct: 1007 HQILLVMVDSLAKLSVDIQDKDLVYNLLLVLSGMLMDEKGKECILDNVHITISVLTQLVS 1066

Query: 2498 YPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALDDRKRAVRQEAVRCRQAWA 2677
            YP +M+VRETA+QCLVA S  PH+++FP R +VL+A   ALDD+KRAVRQEAVRCRQ W 
Sbjct: 1067 YPHMMVVRETALQCLVAFSTFPHSKVFPMRRKVLQAAIKALDDKKRAVRQEAVRCRQTWQ 1126

Query: 2678 SIA 2686
            S A
Sbjct: 1127 SFA 1129


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Citrus sinensis]
          Length = 1151

 Score =  595 bits (1534), Expect = e-167
 Identities = 372/933 (39%), Positives = 526/933 (56%), Gaps = 33/933 (3%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            +  D+KR+DLS+ LM A                                  + C   YG 
Sbjct: 234  EDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGA 293

Query: 185  KRMVKHSRVIWSNLKEVIFN-FSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFD 361
             R+ KH++ +WS++K+ +++   P     ++ LD  +    N I  E+LN L+T      
Sbjct: 294  DRIEKHAKAMWSSIKDAVYSSHEPTLSFASESLD-GVGFRENVILTESLNLLDTVFK--- 349

Query: 362  SSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCN 541
                  FL  II D DI    +S++S  +Y   S + ++ L A+G I +  AK S   CN
Sbjct: 350  -QNSGLFLSWIIGDEDINLIFKSISSYKTYKEISLQSKQKLHAVGSILSVSAKASPAACN 408

Query: 542  KVFLKFFPCLMDVLGVSRNHSSQFCITNHKTV-HGGMNFGAXXXXXXXXXXXXXXXXXXN 718
             V   FFPCLM  LG+S  +S+Q C  N   V  G +N GA                   
Sbjct: 409  SVMESFFPCLMHALGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSE 468

Query: 719  IAAEFIAESKS-WFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTF 895
                  A +   W+ +L+S+S  L   L S L +S      S +  V   VKGL  L TF
Sbjct: 469  EFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANE--DSYETNVYFGVKGLLILGTF 526

Query: 896  PSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGIC 1075
                  IS   +E++L    SII    + T LW L+LKALV IG +I+  +  +S + + 
Sbjct: 527  RGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFN--ESEKALS 584

Query: 1076 Y-NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLV-ACI 1246
            Y + V+EKI+S+  ++D ++   LKL AISEI   G+ Y+L I++ LE+A+ ++L    +
Sbjct: 585  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 644

Query: 1247 QGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQK 1426
             G  KS++ +V LLECY+++VLPR    G F++V ++F++NIWN +E    F++ V  + 
Sbjct: 645  HGNPKSAEVVVQLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKG 704

Query: 1427 VLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLKTQP-----------FQSIHGI 1573
            +LD  M  MKL V  C+VE+Q+++ +KA  V+    +   +            FQ     
Sbjct: 705  LLDATMKAMKLAVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNEFQLTQET 764

Query: 1574 IALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCP 1753
               S R+ WI SLF SV+IA R QT + +++ ++ LF+  L +GN+PAAQAL SMVNK  
Sbjct: 765  SISSSREAWICSLFASVIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLG 824

Query: 1754 SSINEPEISARLSLDQACEDILKLCLW------TLESNSHLKQYNFLD-RDICS------ 1894
               N  E+    +L++A + I    LW      TL SN  L+  + +   DIC       
Sbjct: 825  LKSNGTEVHGNCTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIR 884

Query: 1895 --QRSIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSN-EDITLQQQKENGKGVGME 2065
              Q   + G+AW+GKGLLMRGHEKV +I M  ++CL+S+S     +L+Q           
Sbjct: 885  SLQVHAIAGLAWIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSENS----- 939

Query: 2066 WNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSK 2245
             + S+   AADAF +L+ DSEDCL++K HATIRPLYKQRF+S+++PIL S I +S S+  
Sbjct: 940  -SESVVKYAADAFKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFS 998

Query: 2246 KIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILM 2425
            +  L RA  HIISDTPL  VL ++K +IP L+D L+I  ++ S K IVYSLLLVLSGIL 
Sbjct: 999  RSILCRACAHIISDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILT 1058

Query: 2426 DDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKA 2605
            D NG+  ++E  H +I+  I LISYP +M+VRETAIQCLVAMS LPHARI+P R +VL+A
Sbjct: 1059 DKNGQEAVIECAHIIIDHSIILISYPHMMLVRETAIQCLVAMSGLPHARIYPMRRQVLQA 1118

Query: 2606 VATALDDRKRAVRQEAVRCRQAWASIASRSLQF 2704
            V+ ALDD KRAVRQEAVRCRQAWAS ASRSL F
Sbjct: 1119 VSRALDDPKRAVRQEAVRCRQAWASTASRSLYF 1151


>ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
            gi|548857353|gb|ERN15159.1| hypothetical protein
            AMTR_s00056p00136660 [Amborella trichopoda]
          Length = 1160

 Score =  593 bits (1528), Expect = e-166
 Identities = 366/936 (39%), Positives = 543/936 (58%), Gaps = 36/936 (3%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D +DIKREDLS+ +MNA                                  + C   YG 
Sbjct: 231  DAIDIKREDLSRRMMNAFSSSPLFEPFCIPLLLEKLSSSLEMAKLDALKYLSHCAPRYGP 290

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTD--ELDVDMKSEVNQIRMEALNCLETALSCF 358
             RM  H+  IWS LK+VIFN S   P ++   EL  ++ S+ N++  EAL CLE  +  F
Sbjct: 291  SRMASHAYAIWSALKDVIFNLSSHGPSISIICELPDNLGSQENEVVKEALVCLENCVLVF 350

Query: 359  DSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCC 538
            D  + ++FL LI++D D+     S+TS         E ++   A+  I  + AKVS  CC
Sbjct: 351  DIPKDETFLRLIVEDEDLEMTFRSITSEKCNKDLPHERKQRFCALRNILFTSAKVSSACC 410

Query: 539  NKVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXN 718
            N+VF  FF  LM+ L +S +  S F   +++  +  +                       
Sbjct: 411  NRVFGSFFQRLMNFLRIS-SLDSPFDWASNRNSYVCVELDFEALHICLELIAASNHLANA 469

Query: 719  IAAEFIAESKS---WFFMLKSFSMDLCHVLGSVLRSSNTSMVASE-----KEGVLCAVKG 874
            ++++ +  + +   W  +L+SFS  L   LGS + ++ +S +        +E +   V G
Sbjct: 470  LSSQEVCPTPTQDPWLLLLQSFSGCLVFALGSSVVANKSSSIREMSPSIGEEDLPLKVTG 529

Query: 875  LRSLSTFPSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGH 1054
            L+ L+TFP S SP+S   +E++L + MS+IT R +ET LW  +LKALVQ+G+ IE    H
Sbjct: 530  LQILATFPDSYSPLSRDAFENILAVFMSVITERYEETSLWTSTLKALVQVGMSIERY--H 587

Query: 1055 DSARGICYNKVV-EKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIIS 1228
            DS RG+C+  +V EK+LS L    +   LSL L AISEIA +G  ++  + +   +A+ +
Sbjct: 588  DSQRGVCFMTIVIEKLLSYLFNRSTFPPLSLNLKAISEIAMMGLCFMKRVTKGFGEALST 647

Query: 1229 S-LVACIQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFN 1405
            + L A  +G  KS++  + +L+CY+  +LP       F++ A+  + +IW+ +E++S F 
Sbjct: 648  NFLEAVAEGNTKSAEMAIEILKCYSLYLLPWLQNKEGFEEDAMHLATDIWSYMESIS-FC 706

Query: 1406 TDVTMQKVLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLKTQPFQSIHGIIAL- 1582
                 + +L+  M+ MKL V  CT+  QS I+ KAH ++ S      +   S+   + L 
Sbjct: 707  IGSHGKSLLEATMMAMKLAVGCCTMNQQSSIVSKAHNILASSTLYLVKDSMSLSTSVQLE 766

Query: 1583 -----------SCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLIL-LPEGNLPAAQA 1726
                       +C+D W+ SLF SVVIAL+ QT + D++ IL LF+I+ L +G+  +AQA
Sbjct: 767  KLKITPESVSSACKDGWLISLFASVVIALQPQTVIPDLRIILELFMIVVLLKGDEASAQA 826

Query: 1727 LASMVNKCPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQYNFLD--RDICSQR 1900
            L S+VNK P   NE  +S   +L +A + +++     +  N + K++  +D  ++I S  
Sbjct: 827  LGSIVNKWPVKSNE--VSGACTLGEAMDIMVERGFRPIIFNVNQKKHEDVDNNKEIVSHL 884

Query: 1901 SI--------VLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGV 2056
             I        + G+AW+GKGL+MRGHEKV +I + L+ C++          Q    G   
Sbjct: 885  PISNDSRVHALFGLAWIGKGLVMRGHEKVKDITLLLLSCVLPTGGMRSMPSQHDVLGNDG 944

Query: 2057 GMEWNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGS 2236
            G   N ++A SAADAFH++++DSE  +N+KFHATIRPLYKQRF S+++PILLSSIKES S
Sbjct: 945  GESINIAVARSAADAFHIIMSDSETSVNQKFHATIRPLYKQRFCSTVMPILLSSIKESHS 1004

Query: 2237 TSKKIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSG 2416
            +  K  L+R  GHII  TPLAA+L E+ KI+P LLD L++   +  +K  +Y LL+VLSG
Sbjct: 1005 SITKSMLFRTFGHIIIGTPLAAILIEAPKIVPPLLDGLSMLTLDVQNKDQIYDLLVVLSG 1064

Query: 2417 ILMDDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRV 2596
            ILMD+ GK  ++EN HT+I CL KL++YP LMIVRETAIQCLVAM+ LPHARI+P R +V
Sbjct: 1065 ILMDETGKEAVVENAHTIIGCLSKLVTYPHLMIVRETAIQCLVAMAALPHARIYPMRLQV 1124

Query: 2597 LKAVATALDDRKRAVRQEAVRCRQAWASIASRSLQF 2704
            L+ V+ ALDD+KR+VRQEAVRC   WAS+ASRSL+F
Sbjct: 1125 LETVSKALDDQKRSVRQEAVRCHHVWASMASRSLRF 1160


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Citrus sinensis]
          Length = 1155

 Score =  592 bits (1525), Expect = e-166
 Identities = 373/937 (39%), Positives = 526/937 (56%), Gaps = 37/937 (3%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            +  D+KR+DLS+ LM A                                  + C   YG 
Sbjct: 234  EDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGA 293

Query: 185  KRMVKHSRVIWSNLKEVIFN-FSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFD 361
             R+ KH++ +WS++K+ +++   P     ++ LD  +    N I  E+LN L+T      
Sbjct: 294  DRIEKHAKAMWSSIKDAVYSSHEPTLSFASESLD-GVGFRENVILTESLNLLDTVFK--- 349

Query: 362  SSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCN 541
                  FL  II D DI    +S++S  +Y   S + ++ L A+G I +  AK S   CN
Sbjct: 350  -QNSGLFLSWIIGDEDINLIFKSISSYKTYKEISLQSKQKLHAVGSILSVSAKASPAACN 408

Query: 542  KVFLKFFPCLMDVLGVSRNHSSQFCITNHKTV-HGGMNFGAXXXXXXXXXXXXXXXXXXN 718
             V   FFPCLM  LG+S  +S+Q C  N   V  G +N GA                   
Sbjct: 409  SVMESFFPCLMHALGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSE 468

Query: 719  IAAEFIAESKS-WFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTF 895
                  A +   W+ +L+S+S  L   L S L +S      S +  V   VKGL  L TF
Sbjct: 469  EFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANE--DSYETNVYFGVKGLLILGTF 526

Query: 896  PSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGIC 1075
                  IS   +E++L    SII    + T LW L+LKALV IG +I+  +  +S + + 
Sbjct: 527  RGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFN--ESEKALS 584

Query: 1076 Y-NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLV-ACI 1246
            Y + V+EKI+S+  ++D ++   LKL AISEI   G+ Y+L I++ LE+A+ ++L    +
Sbjct: 585  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 644

Query: 1247 QGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQK 1426
             G  KS++ +V LLECY+++VLPR    G F++V ++F++NIWN +E    F++ V  + 
Sbjct: 645  HGNPKSAEVVVQLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKG 704

Query: 1427 VLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLKTQP-----------FQSIHGI 1573
            +LD  M  MKL V  C+VE+Q+++ +KA  V+    +   +            FQ     
Sbjct: 705  LLDATMKAMKLAVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPILLNEFQLTQET 764

Query: 1574 IALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCP 1753
               S R+ WI SLF SV+IA R QT + +++ ++ LF+  L +GN+PAAQAL SMVNK  
Sbjct: 765  SISSSREAWICSLFASVIIAARPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLG 824

Query: 1754 SSINEPEISARLSLDQACEDILKLCLW------TLESNSHLKQYNFLD-RDICS------ 1894
               N  E+    +L++A + I    LW      TL SN  L+  + +   DIC       
Sbjct: 825  LKSNGTEVHGNCTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIR 884

Query: 1895 --QRSIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSN-EDITLQQQKENGKGVGME 2065
              Q   + G+AW+GKGLLMRGHEKV +I M  ++CL+S+S     +L+Q           
Sbjct: 885  SLQVHAIAGLAWIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSENS----- 939

Query: 2066 WNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSK 2245
             + S+   AADAF +L+ DSEDCL++K HATIRPLYKQRF+S+++PIL S I +S S+  
Sbjct: 940  -SESVVKYAADAFKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFS 998

Query: 2246 KIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILM 2425
            +  L RA  HIISDTPL  VL ++K +IP L+D L+I  ++ S K IVYSLLLVLSGIL 
Sbjct: 999  RSILCRACAHIISDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILT 1058

Query: 2426 DDNGKV----TILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPR 2593
            D NGK      ++E  H +I+  I LISYP +M+VRETAIQCLVAMS LPHARI+P R +
Sbjct: 1059 DKNGKTIGQEAVIECAHIIIDHSIILISYPHMMLVRETAIQCLVAMSGLPHARIYPMRRQ 1118

Query: 2594 VLKAVATALDDRKRAVRQEAVRCRQAWASIASRSLQF 2704
            VL+AV+ ALDD KRAVRQEAVRCRQAWAS ASRSL F
Sbjct: 1119 VLQAVSRALDDPKRAVRQEAVRCRQAWASTASRSLYF 1155


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
            gi|557528866|gb|ESR40116.1| hypothetical protein
            CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score =  591 bits (1524), Expect = e-166
 Identities = 372/937 (39%), Positives = 527/937 (56%), Gaps = 37/937 (3%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            +  D+KR+DLS+ LM A                                  + C   YG 
Sbjct: 234  EDFDVKRDDLSRALMAAFSSTSLFEPFAIPLLLEKLSSSLQSAKVDSLKYLSHCTVKYGA 293

Query: 185  KRMVKHSRVIWSNLKEVIFN-FSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFD 361
             R+ KH++ +WS++K+ I++   P     ++ LD  +    N I  E+LN L+T      
Sbjct: 294  DRIEKHAKAMWSSIKDAIYSSHEPTLSFASESLD-GVGFRDNVILTESLNLLDTVFK--- 349

Query: 362  SSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCN 541
                  FL  II D DI    +S++S  +Y   S + ++ L A+G I +  AK S   CN
Sbjct: 350  -QNSGLFLSWIIGDEDINLIFKSISSFKTYKEISLQSKQKLHAVGSILSVSAKASPAACN 408

Query: 542  KVFLKFFPCLMDVLGVSRNHSSQFCITNHKTV-HGGMNFGAXXXXXXXXXXXXXXXXXXN 718
             V   FFPCLM  LG+S  +S+Q C  N   V  G +N GA                   
Sbjct: 409  SVMESFFPCLMHPLGLSVGNSTQDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSE 468

Query: 719  IAAEFIAESKS-WFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTF 895
                  A +   W+ +L+S+S  L   L S L +S      S +  V   VKGL  L TF
Sbjct: 469  EFKSVAAPANERWYCLLQSYSASLAKALRSTLETSANE--DSYETNVYFGVKGLLILGTF 526

Query: 896  PSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGIC 1075
                  IS   +E++L    SII    + T LW L+LKALV IG +I+  +  +S + + 
Sbjct: 527  SGGSLIISNSIFENILLTFTSIIISEFENTLLWKLALKALVHIGSFIDRFN--ESEKALS 584

Query: 1076 Y-NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLV-ACI 1246
            Y + V+EKI+S+  ++D ++   LKL AISEI   G+ Y+L I++ LE+A+ ++L    +
Sbjct: 585  YMDVVIEKIVSLASSHDFSMPFPLKLEAISEIGATGRNYLLKIVQGLEEAVCANLYEVLV 644

Query: 1247 QGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQK 1426
             G  KS++ +V LLECY+++VLPR    G F++V ++F++NIWN +E    F++ V  + 
Sbjct: 645  HGNPKSAEVVVQLLECYSNKVLPRIHEIGGFEEVLLRFAVNIWNLIEKSVTFSSQVHEKG 704

Query: 1427 VLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDF-----------LKTQPFQSIHGI 1573
            +LD  M  MKL V  C+VE+Q+++ +KA  V+    +           ++   FQ     
Sbjct: 705  LLDATMKAMKLAVGSCSVESQNIVFQKAFTVLSLGTYFPLEDAASNIPIQLNEFQLTQET 764

Query: 1574 IALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCP 1753
               S R+ WI SLF SV+IA   QT + +++ ++ LF+  L +GN+PAAQAL SMVNK  
Sbjct: 765  SISSSREAWICSLFASVIIAACPQTHIPNVRLVIRLFMTTLLKGNVPAAQALGSMVNKLG 824

Query: 1754 SSINEPEISARLSLDQACEDILKLCLW------TLESNSHLKQYNFLD-RDICS------ 1894
               N  E+    +L++A + I    LW      TL SN  L+  + +   DIC       
Sbjct: 825  LKSNGTEVHGNCTLEEAMDIIFDSKLWSFNDSVTLRSNGGLENGSSIGLTDICRGATNIR 884

Query: 1895 --QRSIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSN-EDITLQQQKENGKGVGME 2065
              Q   + G+AW+GKGLLMRGHEKV +I M  ++CL+S+S     +L+Q           
Sbjct: 885  SLQVHAIAGLAWIGKGLLMRGHEKVKDITMTFIECLLSNSKLGSFSLEQDYSENS----- 939

Query: 2066 WNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSK 2245
             + S+   AADAF +L+ DSEDCL++K HATIRPLYKQRF+S+++PIL S I +S S+  
Sbjct: 940  -SESVVKYAADAFKILMGDSEDCLSRKLHATIRPLYKQRFYSTIMPILQSLIIKSNSSFS 998

Query: 2246 KIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILM 2425
            +  L RA  HIISDTPL  VL ++K +IP L+D L+I  ++ S K IVYSLLLVLSGIL 
Sbjct: 999  RSILCRACAHIISDTPLIVVLNDAKTVIPILMDGLSILSNDVSDKDIVYSLLLVLSGILT 1058

Query: 2426 DDN----GKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPR 2593
            D N    G+  ++E  H +I+ +IKLISYP +M+VRETAIQCLVAMS LPHARI+P R  
Sbjct: 1059 DKNVKTIGQEAVIECAHIIIDHIIKLISYPHMMLVRETAIQCLVAMSKLPHARIYPMRRE 1118

Query: 2594 VLKAVATALDDRKRAVRQEAVRCRQAWASIASRSLQF 2704
            VL+A++ ALDD KRAVRQEAVRCRQAWAS ASRSL F
Sbjct: 1119 VLQAISRALDDPKRAVRQEAVRCRQAWASTASRSLYF 1155


>ref|XP_003561357.1| PREDICTED: uncharacterized protein LOC100836414 [Brachypodium
            distachyon]
          Length = 1140

 Score =  587 bits (1513), Expect = e-164
 Identities = 352/918 (38%), Positives = 531/918 (57%), Gaps = 24/918 (2%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D L   R+DLS+ LM+A                                  ++C+  YG 
Sbjct: 236  DNLGATRDDLSRALMHAFCSTPFFEPFAIPLLLDKLSSSLPLAKLDSLKYLDNCISCYGA 295

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDS 364
             RMV+H+  IWS LKEV+F+ S ++ LL+     D +   NQI  EA NCL+ A++   S
Sbjct: 296  DRMVRHTSAIWSKLKEVLFSLSSDQ-LLSSWSPKDAEKNKNQIMSEAKNCLKAAVTYIHS 354

Query: 365  SEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNK 544
            S++D F+ LI+ D DI     S+T       +S +    L A+G + + +A+ S Y C +
Sbjct: 355  SDRDLFINLILLDDDIVNNFHSVTIEEKSICSSPQKLHQLQALGSVISILAESSTYFCTR 414

Query: 545  VFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXNIA 724
            +F   F  L+D+L  S    SQ     + +  G +N+GA                     
Sbjct: 415  IFQAHFTRLIDILVNSAGFESQHLNICNGSSSGTVNYGALYLCLQMLSSCREVAVTSQEE 474

Query: 725  AEFIAESKSWFFMLKSFSMDLCHVLGSVLR-SSNTSMVASEKEGVLCAVKGLRSLSTFPS 901
               +  + +W+ +L        H+LG +L   S     A E+E V  A+KGL  L+TFP 
Sbjct: 475  FAPVKSANTWWLILMGKLEPFIHLLGKLLTIDSQPIQSAVEQEYVSSAMKGLLILATFPE 534

Query: 902  SCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICYN 1081
             CS +    YED+L +L S+IT + +  +LW LSL+ L  IG    +   HDS + + YN
Sbjct: 535  QCS-LPANAYEDILLMLTSVITNKYENVHLWRLSLRTLASIGS--SAVEFHDSQKEMIYN 591

Query: 1082 K-VVEKILSMLQTNDSTVSLSLKLVAISEIANVG-QYVLSIIRALEDAIISSLVACIQGG 1255
            + VV+KI+S+ ++ D+++ L+L+L A  E+   G  Y+L + R+LE+A+I ++   + G 
Sbjct: 592  RIVVDKIISLAKSCDTSMPLNLRLEASFEVGTAGVNYMLRVARSLEEAVIINIFQ-VNGR 650

Query: 1256 LKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQKVLD 1435
             +  + +  L++CY+SR+LP   TS   +D A+ F++ +W+++ +++  +  ++ Q +LD
Sbjct: 651  TECVEYVECLMDCYSSRLLPWLFTSAGVNDFALSFAMRLWDEISDLATLDRIIS-QGLLD 709

Query: 1436 QVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLKTQPFQSIHGII--------ALSCR 1591
             +M+ MK LV  CT E QSLI++KA   I SM  L  +    +H ++        A S +
Sbjct: 710  SLMMGMKFLVGVCTEEQQSLIIQKACSTISSMLSLPVKSM--VHHVLSEDDELVPAHSAQ 767

Query: 1592 DKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCPSSINEP 1771
            DK +  +  SV++ LR QTP+ DM  ++NLF + L  G +PAA ALAS+ NK    ++  
Sbjct: 768  DKALVCMLSSVIVGLRPQTPVQDMTMMINLFAVFLLNGQMPAAHALASIFNKY---LHNS 824

Query: 1772 EISARLSLDQACEDILKLCLWTLESNSHLKQYNF-------------LDRDICSQRSIVL 1912
            E S    LD+  + IL  C   + ++S+ K  +              +   + S+  I+ 
Sbjct: 825  EFSHENKLDKILDVILGRCFSIVLASSNSKISHSSGAISDNANCSDSMSGSVGSKVDILC 884

Query: 1913 GMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSLATSA 2092
            G+AW+GKGLLMRG EKV +++MFL+KCLVSD N       QK     V  +  +SLATSA
Sbjct: 885  GLAWIGKGLLMRGDEKVKDVSMFLLKCLVSDQNSVNVQPYQKTQNDNVSSD--ASLATSA 942

Query: 2093 ADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYRALG 2272
            ADAFHV+++DSE CLNKKFHA I+ LYKQRFFS ++PI LS IKE+   + K+ LYRA G
Sbjct: 943  ADAFHVMMSDSEVCLNKKFHAKIKLLYKQRFFSILMPIFLSKIKETPVLTTKLVLYRAFG 1002

Query: 2273 HIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKVTIL 2452
            HIIS+ P++AV+ E+ +I+  ++D+LA    +   K +VY++LLVLSG+LMD+ GK  IL
Sbjct: 1003 HIISNAPVSAVITEAHQILLVMVDSLAKLSVDIQDKDLVYNMLLVLSGMLMDEKGKECIL 1062

Query: 2453 ENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALDDRK 2632
            ENIH V+  L +L+SYP +M+VRETA+QC VAMS  PH++++  RP+VL+A + ALDD+K
Sbjct: 1063 ENIHIVVSVLTQLVSYPHMMVVRETALQCFVAMSSFPHSKMYRMRPQVLQAASKALDDKK 1122

Query: 2633 RAVRQEAVRCRQAWASIA 2686
            RAVRQEAVRCRQ W S A
Sbjct: 1123 RAVRQEAVRCRQTWQSFA 1140


>gb|EEC81606.1| hypothetical protein OsI_25098 [Oryza sativa Indica Group]
          Length = 1166

 Score =  587 bits (1513), Expect = e-164
 Identities = 359/911 (39%), Positives = 522/911 (57%), Gaps = 21/911 (2%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D LD  R+DLSK LM+A                                  ++C+  YG 
Sbjct: 238  DDLDATRDDLSKALMHAFCSTPYFEPFAIPLLLDKLSSSLPLAKLDSLKYLDNCIRCYGA 297

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDS 364
             RM +H   IW  LKEVIF+ S ++ L T     DM+   N+I  EAL CL+TA+     
Sbjct: 298  DRMGRHVITIWFKLKEVIFSLSIDQILSTSGAK-DMEKNKNEIVSEALTCLKTAIIQMGP 356

Query: 365  SEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNK 544
            S++D  + LI+ D DI + + S+ S  +   TS +    L A+G + + +A+ S Y C +
Sbjct: 357  SDEDRLINLILLDEDIVSSIHSVASEEASGLTSLQNPIQLHALGSVISILAESSAYFCTR 416

Query: 545  VFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXNIA 724
            V    F  L+D L +S    SQ          G +N+GA                     
Sbjct: 417  VLQAHFARLVDSLEISAGRESQHLNNCSGPSSGAINYGALYLSVQMLSSCREVALTYKEE 476

Query: 725  AEFIAESK-SWFFMLKSFSMDLCHVLGSVLR-SSNTSMVASEKEGVLCAVKGLRSLSTFP 898
               I  +K SW+ +L+     L H+L S+L   S     A  +E V CAVKGL  L+TFP
Sbjct: 477  FSPIKSAKESWWLILEKKLDSLIHILQSLLTIDSQFVQSADRQEYVSCAVKGLIILATFP 536

Query: 899  SSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICY 1078
                P+S   YEDVL  L S+I  + +  +LW LSLKAL  IG  I     H S +   Y
Sbjct: 537  EPRLPLSASAYEDVLLTLTSVIMSKYENMHLWRLSLKALTTIGSSI--VEFHASQKENIY 594

Query: 1079 NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQY-VLSIIRALEDAIISSLVACIQGG 1255
            NKVV+KI S+ +   +++ L+L+L A  E+   G   +L I ++LE+A+++  V C    
Sbjct: 595  NKVVDKISSLDEPCRTSIPLNLRLEACFEVGTSGSNCMLRIAKSLEEAVVNGRVKC---- 650

Query: 1256 LKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQKVLD 1435
               S+ +V LLECY  RVLP     G  +++A+ F++ +WN++ +++  +  +  Q +L 
Sbjct: 651  ---SEYVVNLLECYCGRVLPWLFNFGGVNELALNFAMRLWNEIRDLATSDR-IGSQDLLS 706

Query: 1436 QVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLK----TQPFQSIHGIIAL-SCRDKW 1600
             +M+ MKL++  CT E QSLI++KA+  I SM  L     T+   ++   + L S RD +
Sbjct: 707  SLMMGMKLVIGICTEEQQSLIVQKAYDTISSMLSLPVKSMTRHLLAVDEAVPLYSVRDTF 766

Query: 1601 IASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCPSSINEPEIS 1780
            +  +  SV++ LR QTP+ DM  ++NLF + L +G +PAA ALAS+ NK   +++  E S
Sbjct: 767  LMCMLSSVIVGLRPQTPVPDMLMMINLFTVFLLKGQIPAAHALASIFNK---NLHNSEFS 823

Query: 1781 ARLSLDQACEDILKLCLWTLESNSHLKQY-------------NFLDRDICSQRSIVLGMA 1921
                LD+  + IL+ C  T+   S++K                 L   I S+  I+ G+A
Sbjct: 824  HENKLDKVIDTILERCFSTISVRSNMKTSLSCAGRSDDANCSEILSGSIESKDDIISGLA 883

Query: 1922 WVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSLATSAADA 2101
            W+GKGLLMRG EKV ++++FL+KCL SD +       Q+E+G  +     +SLATSAADA
Sbjct: 884  WLGKGLLMRGDEKVKDVSLFLLKCLCSDQSLAGISSHQEEHG--ISDSSYASLATSAADA 941

Query: 2102 FHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYRALGHII 2281
            FHV+++DSE CLNKKFHA I+PLYKQRFFS ++PI LS IKES   + K+ LYRA GHII
Sbjct: 942  FHVMMSDSEVCLNKKFHARIKPLYKQRFFSILMPIFLSKIKESTVMTTKLVLYRAFGHII 1001

Query: 2282 SDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKVTILENI 2461
            S+ P+ AV+ E+ +I+  ++D++A    +   K +VYS+LLVLSG+LMD+ GK  I+ENI
Sbjct: 1002 SNAPVPAVITEAHRILLVMVDSIAKLSQDVKDKDLVYSILLVLSGMLMDEKGKECIVENI 1061

Query: 2462 HTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALDDRKRAV 2641
            H ++  L +L+SYP +M+VRETA+QCLVAMS LPH++I+  RP++L+A   ALDD+KR V
Sbjct: 1062 HIIVSVLTQLVSYPHMMVVRETALQCLVAMSSLPHSKIYRMRPQILQAAIKALDDKKRRV 1121

Query: 2642 RQEAVRCRQAW 2674
            RQEAVRCRQ W
Sbjct: 1122 RQEAVRCRQTW 1132


>tpg|DAA59748.1| TPA: hypothetical protein ZEAMMB73_472050 [Zea mays]
          Length = 932

 Score =  587 bits (1512), Expect = e-164
 Identities = 358/914 (39%), Positives = 531/914 (58%), Gaps = 22/914 (2%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            +GLD  REDLS+ LM+A                                  + C+  YG 
Sbjct: 41   NGLDTTREDLSRALMHAFCSTQYFEPFVIPLLLDKLSSSLPLAKIDSLKYLDKCIRFYGA 100

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDS 364
             RMV+H+  +W  LKEVIFN S ++ L++                EALNCL+TA+   DS
Sbjct: 101  DRMVRHASAVWYKLKEVIFNLSSDQLLIS----------------EALNCLKTAIMYTDS 144

Query: 365  SEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNK 544
            S++D F+ LI+ D DI  K+ S++S+     +S E    L A+G + + +A+ S Y C +
Sbjct: 145  SDKDLFINLILLDEDIVNKIHSVSSVEKTILSSLEDLAQLHALGSVISILAESSTYFCTR 204

Query: 545  VFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXNIA 724
            V  + F  L+D++G   ++ S      + +    +N+GA                     
Sbjct: 205  VLQEHFAHLVDIVGTKADYESWQLNNCNGSSSAPVNYGALYLSVQLLSSCREVALVSYED 264

Query: 725  AEFIAESK-SWFFMLKSFSMDLCHVLGSVLRSSNTSMVAS-EKEGVLCAVKGLRSLSTFP 898
               +  +K SW+ +L+     L H+L S+   ++ SM  +  +E V CAVKGL +L+TFP
Sbjct: 265  FSSVKLAKGSWWLILQKKLEQLIHLLRSIFAIASQSMQPNFRQEYVSCAVKGLLTLATFP 324

Query: 899  SSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICY 1078
              CSP+    YED+L +  SII  + +   LW LSLKAL  IG  I  A  H S R + Y
Sbjct: 325  EQCSPLPANAYEDILLMFTSIIINKFENLDLWRLSLKALASIGSSI--AKFHASEREVVY 382

Query: 1079 NK-VVEKILSMLQTNDSTVSLSLKLVAISEIANVG-QYVLSIIRALEDAIISSLVAC-IQ 1249
             + VV+KI+S+ ++ D+++ L L+L A  E+   G  Y+L + ++LE A+++++      
Sbjct: 383  YRTVVDKIVSLAESYDTSMPLGLRLEASYEVGTAGLNYMLRVAKSLEVAVVTNISESEAN 442

Query: 1250 GGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQKV 1429
            G ++ +D +  L ECY++RVLP    SG  +++A+ F++++ ++ E+++V +  ++ Q +
Sbjct: 443  GRMECADHVAHLFECYSNRVLPWLLASGGVNELALSFALHLLDETEDLTVLDR-ISSQGL 501

Query: 1430 LDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLK----TQPFQSIHGIIAL-SCRD 1594
            LD +M  MKLLV  CT E QSLI++KAH  I SM  L     T     +  ++ L S  +
Sbjct: 502  LDSLMTGMKLLVGVCTEEQQSLIVQKAHSTISSMLSLPMELMTDRLLPVDELVPLHSVSE 561

Query: 1595 KWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCPSSINEPE 1774
              + S+F S++I LR QTP+ DM  ++ LF + L  G +PAA ALAS+ NK    ++ PE
Sbjct: 562  TALISMFSSIIIGLRPQTPVPDMMVMIKLFTVFLLNGKMPAAYALASIFNKY---LHNPE 618

Query: 1775 ISARLSLDQACEDILKLCLWTLESNSHLK---------QYNFLD---RDICSQRSIVLGM 1918
             S    +D+  +DIL+ C  T+ +NS  K           NF D   R+  S+ +I+  +
Sbjct: 619  FSHENQMDKILDDILERCFSTVLANSCSKTSQSCAGTSDVNFSDVSSRNKLSKINILSSL 678

Query: 1919 AWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSLATSAAD 2098
            AW+GKGLLMRG EKV +I+MFL+K L SD         Q+E   G   +  +SLA SAA 
Sbjct: 679  AWIGKGLLMRGDEKVKDISMFLLKILFSDEILSTVPSHQEEPYGGDSSD--TSLAISAAS 736

Query: 2099 AFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYRALGHI 2278
            AFHV+++DSE CLNKKFHA I+PLYKQRFFS M+PI LS IKE+   + K+ALYRA GHI
Sbjct: 737  AFHVMMSDSEMCLNKKFHARIKPLYKQRFFSIMMPIFLSKIKETTVVTTKLALYRAFGHI 796

Query: 2279 ISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKVTILEN 2458
            IS+ P+ AV+ E+ +I+  ++D+LA    +   K +VYSLLLV SG+LMD+ GK  IL+N
Sbjct: 797  ISNAPVPAVITEAHQILLVMVDSLAKLSMDVGDKDLVYSLLLVFSGMLMDEKGKECILDN 856

Query: 2459 IHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALDDRKRA 2638
            I   I  L +L+SYP +M+VRETA+QCLVA S  PH++I+P R +V++A   ALDD+KRA
Sbjct: 857  IQITISVLTELVSYPHMMVVRETALQCLVAFSTFPHSKIYPVRRKVVQAAVRALDDKKRA 916

Query: 2639 VRQEAVRCRQAWAS 2680
            VR+ AVRCR  W S
Sbjct: 917  VRRVAVRCRHTWQS 930


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  580 bits (1495), Expect = e-162
 Identities = 359/948 (37%), Positives = 543/948 (57%), Gaps = 48/948 (5%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            + +D+KR+DLS+ LM A                                  + C   +  
Sbjct: 235  EDVDVKRDDLSRALMLAFSSTPLFEPFAMPLLLEKLSSSLPTAKVDSLKYLSYCTLKFRA 294

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELD-VDMK-SEVNQIRMEALNCLETALSCF 358
             R+ +H+  IWS+LK+ I++ S E P+L+ +L+ VD   SE N+I  EAL  LE  +   
Sbjct: 295  DRIAEHAGAIWSSLKDAIYS-SGEEPMLSSDLESVDSPGSEKNEIATEALLLLENLIV-- 351

Query: 359  DSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCC 538
                 + FL +II D ++     ++TS  SY+  S + ++ L  +G I    AKVS+  C
Sbjct: 352  --QNNNFFLSMIISDEEVKMIFNTITSYKSYNEISLQSKQKLHMVGRILYVCAKVSVSSC 409

Query: 539  NKVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGM-NFGAXXXXXXXXXXXXXXXXXX 715
            N++F  +FP LM+ LG+   ++S  C +N   V     N+G+                  
Sbjct: 410  NRIFESYFPRLMEALGILVENTSGACHSNENCVKAKQPNYGSFYLSIKLLGACRDLSTSS 469

Query: 716  -NIAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLST 892
             N+A++ I+ ++++  +L+ FS  L     + L +S TS  A + +  L  VKGL+ L+T
Sbjct: 470  DNLASQCISTNETYCCLLQRFSTSLTETFSAALATS-TSGPAQDVDMYL-GVKGLQILAT 527

Query: 893  FPSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGI 1072
            FP     +S+  ++++L   +SIIT   ++T LWN +LKALVQIG ++   +  D     
Sbjct: 528  FPGGYLFLSKLTFDNILMTFLSIITVDFNKTLLWNQALKALVQIGSFVHGCNESDKEMSY 587

Query: 1073 CYNKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLV---- 1237
              + VV K++ +  + D ++  SLKL AIS I   GQ Y+L +   LE+AI ++L     
Sbjct: 588  V-DIVVGKMILLASSPDFSMPWSLKLTAISSIGMSGQKYMLKVFLGLEEAIRANLAEIYV 646

Query: 1238 ------------ACIQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQ 1381
                          +QG LKS+  L+ LLECY+  +LP    +  F++V +QF +N+WNQ
Sbjct: 647  CMIKKKIYVLYSCLVQGNLKSAKILLQLLECYSDELLPWIQKTEGFEEVLMQFVVNLWNQ 706

Query: 1382 LENVSVFNTDVT-MQKVLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFL------ 1540
            +EN + F       + +LD +M  MK  VA C+VE+Q++I+ KA+ V+ S  FL      
Sbjct: 707  IENFNAFTVAFHGKESLLDAIMKVMKDAVAFCSVESQNVIIYKAYGVLSSSTFLPLKESL 766

Query: 1541 -----KTQPFQSIHGIIALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEG 1705
                 + + F++I  +  LS RD+WI SLF SV+IALR QT + + + +L+LF+  L +G
Sbjct: 767  SENSVQLECFRAIQQMDRLSSRDEWIHSLFASVIIALRPQTHIPNTRIVLHLFITALLKG 826

Query: 1706 NLPAAQALASMVNKCPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQYN----- 1870
            ++  A+AL S+VNK     N+  IS   ++++A + I  + L     N    +++     
Sbjct: 827  HVTTAEALGSLVNKLDQKSNDACISGDCTIEEAMDIIFSINLLCSFGNGSSGRFDRTRNG 886

Query: 1871 --------FLDRDICSQRSI--VLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDI 2020
                     LD    +   I  ++G+AW+GKGLLMRGHEKV +I M  + CL+SD     
Sbjct: 887  DEMDLIKLCLDAPNLAWIKIPAIVGLAWIGKGLLMRGHEKVKDITMVFLNCLLSDGEIGA 946

Query: 2021 TLQQQKENGKGVGMEWNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSML 2200
            +  +          +   S+  SA+DAF +L++DSE CLN+K+HA +RPLYKQRFFSS++
Sbjct: 947  SPLKHGSLENNGEQDMQQSVMKSASDAFQILMSDSELCLNRKYHAIVRPLYKQRFFSSIM 1006

Query: 2201 PILLSSIKESGSTSKKIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHK 2380
            PIL   I +S S+  K  LYRA  H+ISDTPL+ +  ++KK++P LLD L + G +   K
Sbjct: 1007 PILYPLITKSDSSFSKSLLYRAFAHVISDTPLSVISNDAKKLVPVLLDGLTLLGKDVLDK 1066

Query: 2381 KIVYSLLLVLSGILMDDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVL 2560
             I+Y LLLVLSGIL D NGK  ++EN H +I+CLI+L++YP +M++RETA+QCLVAMS L
Sbjct: 1067 DIMYGLLLVLSGILTDTNGKEAVIENAHIIIKCLIELVAYPHMMLIRETAVQCLVAMSEL 1126

Query: 2561 PHARIFPFRPRVLKAVATALDDRKRAVRQEAVRCRQAWASIASRSLQF 2704
            PH RI+P R +VL+A++ ALDD KRAVRQEAVRCRQAWASIASRSL +
Sbjct: 1127 PHTRIYPVRIQVLQAISKALDDPKRAVRQEAVRCRQAWASIASRSLHY 1174


>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
            lycopersicum]
          Length = 1153

 Score =  567 bits (1460), Expect = e-158
 Identities = 350/926 (37%), Positives = 533/926 (57%), Gaps = 26/926 (2%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D +DIKRE+LS+ LM A                                  + C   YGG
Sbjct: 251  DDVDIKREELSRALMLAFASTPLFEPSVIPLLLDKLSSSLPSAKVESLKYLSFCTLKYGG 310

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVD-MKSEVNQIRMEALNCLETALSCFD 361
             RM K+++ +WS LK+ +F  SP+  L  D   +D +    ++I  +AL  L+  +   +
Sbjct: 311  DRMEKYTKSLWSALKDALFT-SPQSTLSEDSDPIDGLGFHESEIMTQALEFLQVLVRQHN 369

Query: 362  SSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCN 541
            +S    FL LI+ D DI T L S +   +++  S + ++ L A+G + +   K S   CN
Sbjct: 370  AS----FLSLIMGDGDISTFLNSFSQFDNFNSLSTQYKQRLHAVGHVLSVCIKASASSCN 425

Query: 542  KVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXN- 718
            KVF  FFP L+D L +S ++S       H  V    NFGA                  + 
Sbjct: 426  KVFESFFPRLVDALRLSVDNSHGIV---HSAVDANFNFGALYLCVELLAACRQLVVSSDE 482

Query: 719  IAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTFP 898
            +A+       SW  +L SFS  LC+V   ++R+S   + ++    V  AVKGL  L+TFP
Sbjct: 483  VASAHDLARDSWCQILHSFSTSLCNVFFCLIRAS--CVESTRNAYVYAAVKGLEILATFP 540

Query: 899  SSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICY 1078
             S   +S+  YE++L  L SII    ++ +LW  +LKALV+I L++     H+  +   +
Sbjct: 541  GSFISVSKLMYENILLTLTSIIESEFNKKFLWKAALKALVEISLFVNKY--HEDEKAASF 598

Query: 1079 NKVV-EKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLVAC-IQ 1249
            N +V +KI+S++ ++D  +  SLKL A+ +I   G+ ++LS++  LE  I ++L    + 
Sbjct: 599  NSIVKQKIVSLISSDDLNMPQSLKLEAVFDIGLTGKNFMLSVVSELEKTISANLSEILVH 658

Query: 1250 GGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQKV 1429
            G  + +    GLLECY+++VLP    +G  D+V++ F++NI+ ++E+ +  + +   +++
Sbjct: 659  GDRRLAGLTAGLLECYSNKVLPWFHVNGGADEVSLSFAVNIFTKMEHNTSLSLEAEGKEL 718

Query: 1430 LDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFL--------------KTQPFQSIH 1567
            L   M  MK  +  C+VE+Q  +L+KA  V+ +  F               KTQ  Q+  
Sbjct: 719  LGATMAAMKQAMTCCSVESQEKVLQKAIDVMETNSFFFSNNLILGTDLFNKKTQLGQTSE 778

Query: 1568 GIIALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNK 1747
            G   LSC+D+WI SLF SVVIALR QT + +++ +L L  + L EG++P+AQAL S+VNK
Sbjct: 779  G---LSCQDEWIISLFASVVIALRPQTQIPNIRLLLQLLAMTLLEGHIPSAQALGSLVNK 835

Query: 1748 CPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQYNFLD-------RDICSQRSI 1906
             P +I+E       SL +  + +LK  LW   + S  K+ N  D       R        
Sbjct: 836  LPLNISED-----CSLKELIDMLLKNVLW--RNISIGKEGNHGDAVAMSNLRSSSLNSHA 888

Query: 1907 VLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSLAT 2086
            V+G+AW+GKGLLMRGHEK+ ++ M  + CLVS+ ++   L    +      ++   SL  
Sbjct: 889  VIGLAWIGKGLLMRGHEKLKDVTMTFLSCLVSNEDQGNLLPFNDQMKDPAELKV-FSLRK 947

Query: 2087 SAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYRA 2266
            SAADAFH++++DS+ CLN+ +HA +RPLYKQRFF+ M+P+ LS+I +  S++ +  LY+A
Sbjct: 948  SAADAFHIVMSDSDACLNRNYHAIVRPLYKQRFFNIMMPMFLSAIAKCDSSTSRCFLYQA 1007

Query: 2267 LGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKVT 2446
              H++S+TPL AV+ ++KK++P L+D   I   + SHK+I+YS+L+VLSGIL D NG+ T
Sbjct: 1008 FAHLVSETPLVAVVGDAKKVLPVLMDCFLILSKDISHKEIIYSVLIVLSGILTDKNGQET 1067

Query: 2447 ILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALDD 2626
            I+EN   VI  LI+L SYP +M++RETAIQC  AMS LPHARI+P R +VL+A+  ALDD
Sbjct: 1068 IIENAPMVIRRLIELTSYPYMMVIRETAIQCFGAMSELPHARIYPMRTQVLQAITKALDD 1127

Query: 2627 RKRAVRQEAVRCRQAWASIASRSLQF 2704
             KR VR EAV+CR AWASIASRS+ F
Sbjct: 1128 PKRVVRLEAVKCRLAWASIASRSIHF 1153


>gb|EOY26932.1| MMS19 nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao]
          Length = 1149

 Score =  564 bits (1453), Expect = e-158
 Identities = 360/927 (38%), Positives = 520/927 (56%), Gaps = 27/927 (2%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            + ++IKR+DL++ LM A                                  + C   YG 
Sbjct: 236  EDVNIKRDDLARALMLAFSSTPLFEPFAIPLLIEKLSSSLPSAKVDSLRYLSDCTVKYGV 295

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDS 364
             RM KH   +WS+LK+ +F         T E    +    N+I  EAL+ L+  +     
Sbjct: 296  DRMAKHGEALWSSLKDAVFTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIV---- 351

Query: 365  SEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNK 544
               + FL LI+ D DI      ++S  SY G  A+ ++ L A+G I ++  K S   CN+
Sbjct: 352  QNTNFFLDLIVVDEDINMIFNMISSYKSYHGIPAQSKQRLHAVGCILSASVKASTASCNR 411

Query: 545  VFLKFFPCLMDVLGVS-RNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXN- 718
            VF  FF  LMD+LG+  RN S      +   +    N GA                    
Sbjct: 412  VFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVIASSET 471

Query: 719  IAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTFP 898
            I A      ++W ++L+SFS  L     S   +S  +   S    V   VKGL  L+TFP
Sbjct: 472  IIAASAHTEETWSYLLRSFSSSLTKAFCS---ASICTSEDSHDADVYFGVKGLLILATFP 528

Query: 899  SSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICY 1078
                 IS+  +E +L   +SI+T     T LW L+LKALVQIG +IE    H+S +   Y
Sbjct: 529  EGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKALVQIGSFIEKC--HESEKEPSY 586

Query: 1079 -NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLVAC-IQ 1249
               VVEKI+S     D ++   L+L A+SEI   G+ Y+L ++  LE+AI ++L    + 
Sbjct: 587  LGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYMLKVVEGLEEAIYANLSEVYVH 646

Query: 1250 GGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQ-K 1426
            G   S++ +  LL+CY+ +V+P    +  FD+V +QF+I+IWNQ+E   VFN   T + +
Sbjct: 647  GSSNSAEIVTQLLKCYSDKVIPWIQCAKGFDEVPLQFAIHIWNQIELSMVFNATQTNKIE 706

Query: 1427 VLDQVMITMKLLVAGCTVENQSLILKKAHCVILSM------DFLKTQPFQSIHGIIALSC 1588
            VLD +M  MKL VA C+ ENQ++I++K++ ++ S       +  + + FQ +  +   S 
Sbjct: 707  VLDVMMKAMKLAVASCSEENQNIIVQKSYHILSSSTSFPLKELFRQESFQIVQ-VDNSSS 765

Query: 1589 RDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCPSSINE 1768
            RD+WI SLF +VVIA+  +T + ++K +L LF+  L +GN+  AQAL S+VNK    +  
Sbjct: 766  RDEWILSLFAAVVIAVHPETYVPNIKPLLYLFMTTLLKGNVVTAQALGSVVNKL--GLES 823

Query: 1769 PEISARLSLDQACEDILKLCLWTLESNSHL-------KQYNFLDRDICS--------QRS 1903
              +    +L++  + IL L LW   SNS           ++    ++CS        Q  
Sbjct: 824  AGVQTDCTLEEVMDIILNLSLWIFHSNSSADIQAKMTSAHDISLINLCSSIGSCTSLQIH 883

Query: 1904 IVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSLA 2083
             ++G+AW+GKGLLMRGHEKV +I M  ++CL  +   +I  Q++  +     ++ + S+ 
Sbjct: 884  AIVGLAWIGKGLLMRGHEKVKDITMIFLRCLQPNGRAEILHQEEGISESNNELDLHHSVM 943

Query: 2084 TSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYR 2263
             SAADAF +L+ DSE CLN+ FHA IRPLYKQRFFS+M+PIL S I +S   S+ + L R
Sbjct: 944  KSAADAFQILMGDSEVCLNRGFHAVIRPLYKQRFFSTMMPILQSLIMKSEPLSRPLLL-R 1002

Query: 2264 ALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKV 2443
            A  HII DTPL  VL+++KKIIP LLD L+   ++   K ++Y LLLVLSGILMD NG+ 
Sbjct: 1003 ASAHIIVDTPLIVVLSDAKKIIPMLLDGLSALSNDILDKDVIYGLLLVLSGILMDKNGQE 1062

Query: 2444 TILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALD 2623
             + ++ HT+   LI+LI YP +M+VRETAIQCLVA+S L +AR++P R +VL+A+A ALD
Sbjct: 1063 AVSDSAHTITNRLIELIQYPHMMLVRETAIQCLVAISGLSYARVYPMRTQVLQAIAKALD 1122

Query: 2624 DRKRAVRQEAVRCRQAWASIASRSLQF 2704
            D KRAVRQEAVRCRQAWASIASRSL F
Sbjct: 1123 DPKRAVRQEAVRCRQAWASIASRSLHF 1149


>gb|EMT20655.1| MMS19 nucleotide excision repair protein-like protein [Aegilops
            tauschii]
          Length = 1218

 Score =  557 bits (1436), Expect = e-156
 Identities = 341/939 (36%), Positives = 525/939 (55%), Gaps = 49/939 (5%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D L + R++LS+ LM+A                                  ++C++ YG 
Sbjct: 296  DNLGVTRDELSRALMHAFCASPYFEPFAIPLLLDKLSSSLPLAKLDSLKYLDNCIHCYGA 355

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDS 364
             RMV H+  IW  LKEV+F+ S ++ LL+     D ++  NQI+ EA +CL+TA++   S
Sbjct: 356  DRMVTHASAIWFKLKEVLFSLSSDQ-LLSSGSPKDAENNKNQIKSEAEHCLKTAVTYIHS 414

Query: 365  SEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNK 544
             ++D F+ LI+ D DI   + S+T+          I   L A+G + + +A  S Y C +
Sbjct: 415  PDRDIFINLILLDEDIVNNIHSVTT------EEKSIDSSLQALGSVVSILAGSSTYLCTR 468

Query: 545  VFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXNIA 724
            VF   F  L+D+LG S    SQ     + +    +N+GA                    +
Sbjct: 469  VFQAHFKRLVDILGNSAGFDSQHLSIANGSSPAAINYGALYLSVQMLSSCREVAVA---S 525

Query: 725  AEFIAESKSWFFMLKSFSMDLCHVLGSVLR-SSNTSMVASEKEGVLCAVKGLRSLSTFPS 901
             E +   +SW+ +L+     + H+ G +L      +  A  KE V CAVKGL  L+T P 
Sbjct: 526  REGVPAEESWWLILEEKLDQIIHLFGKLLTIDCQPTQSAVRKECVSCAVKGLLILATIPE 585

Query: 902  SCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICYN 1081
             CS + E  YED+L++L  +IT + +  + W LSLK L  IG    +   H S R + YN
Sbjct: 586  QCSLLLENAYEDILQMLTLVITSKYENAHFWRLSLKTLTSIGS--SAVELHASKREMVYN 643

Query: 1082 K-VVEKILSMLQTNDSTVSLSLKLVAISEIANVG-QYVLSIIRALEDAIISS-------- 1231
            + VV+KI+ + ++ D+++ L+L+L A  E+      Y+L + R+LE+ +I +        
Sbjct: 644  RIVVDKIICLAESCDASMPLNLRLEACFEVGTASVNYMLRVARSLEETVIRNISQACIES 703

Query: 1232 ----LVAC----------------IQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVA 1351
                L++C                + G ++ +D +  L++CY+SR+LP   TSG  +++A
Sbjct: 704  PCCLLISCKLHFISNQTNVLLILQVNGSIECADYVACLIDCYSSRLLPWFFTSGGLNELA 763

Query: 1352 VQFSINIWNQLENVSVFNTDVTMQKVLDQVMITMKLLVAGCTVENQSLILKKAHCVILSM 1531
            + F++ +W+++ ++   +  ++ + +L+ +M+ MKLLV  CT E QSLI++KA  ++ SM
Sbjct: 764  LSFALRLWDEIGDLVTLDRIIS-EGLLESLMMGMKLLVGVCTEEQQSLIVQKACGIVSSM 822

Query: 1532 DFLK----TQPFQSIHGII-ALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILL 1696
              L     T    S+  ++ A S +D  +  +  SV++ L  QTP+ +M  ++NLF + L
Sbjct: 823  LSLPVKALTHHLLSVDELVPAHSVQDTALVCMLSSVIVGLWPQTPVPEMMMMINLFSVFL 882

Query: 1697 PEGNLPAAQALASMVNKCPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQY--- 1867
              G++PAA ALAS+ NK    +   E S  + LD+  + IL  C   +  +S+LK     
Sbjct: 883  LNGHIPAAHALASIFNKY---LQNSEFSHEIKLDKILDVILGGCFSIVLPSSNLKMSRSS 939

Query: 1868 ----------NFLDRDICSQRSIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNED 2017
                      + L   I S+  I+ G+AW+GKGLLMRG EKV EI+MFL+KCL S++   
Sbjct: 940  AATSDNADFSDSLPGSIGSKIDILCGLAWIGKGLLMRGDEKVKEISMFLLKCLSSEA--- 996

Query: 2018 ITLQQQKENGKGVGMEWNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSM 2197
                               SLA++AADAFHV++ DSE CLNKKFHA I+ LYKQRFFS +
Sbjct: 997  -------------------SLASAAADAFHVMMGDSEVCLNKKFHARIKFLYKQRFFSIL 1037

Query: 2198 LPILLSSIKESGSTSKKIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSH 2377
            +PI LS IKE+   + K+ +YRA GHIIS+ P++AV+ E+ +I+  ++D LA    +   
Sbjct: 1038 MPIFLSKIKETSELTTKLVIYRAFGHIISNAPVSAVITEAHQILLVMVDILAKLSVDNQD 1097

Query: 2378 KKIVYSLLLVLSGILMDDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSV 2557
            K +VYSLLLVLSG+LMD+ GK  I+ENI  +I  L +L+SYP +M+VRETA+QC VAMS 
Sbjct: 1098 KDLVYSLLLVLSGMLMDEKGKECIVENIRIIISVLAQLVSYPHMMVVRETALQCFVAMSS 1157

Query: 2558 LPHARIFPFRPRVLKAVATALDDRKRAVRQEAVRCRQAW 2674
             PH++++  RP+VL+A   ALDD+KRAVRQEAVRCRQ W
Sbjct: 1158 FPHSKVYRMRPQVLQAAIKALDDKKRAVRQEAVRCRQTW 1196


>gb|EMJ18740.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
          Length = 1158

 Score =  555 bits (1430), Expect = e-155
 Identities = 357/937 (38%), Positives = 530/937 (56%), Gaps = 46/937 (4%)
 Frame = +2

Query: 2    DDGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYG 181
            D+  ++KR+DLSK LM+A                                  N C   YG
Sbjct: 235  DEDAEVKRDDLSKALMSAFSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYG 294

Query: 182  GKRMVKHSRVIWSNLKEVIFNFSPERPLL--TDELDVDMKSEVNQIRMEALNCLETALSC 355
              RM KH+  IW +LK+ I N S E+P +  T E    +  + N+I  EAL  L+     
Sbjct: 295  ADRMAKHAGAIWISLKDAISN-SLEKPDMSFTSEPLYGLGFQENEIATEALMLLQKVTL- 352

Query: 356  FDSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYC 535
                 +  FL LII D  I     S+ S   Y+    + ++ L A+G I   I+K S+  
Sbjct: 353  ---QNEALFLSLIIQDEGINIVFNSIASHEHYNNIPLQGKQWLHAVGRILYIISKTSMAS 409

Query: 536  CNKVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGG-MNFGAXXXXXXXXXXXXXXXXX 712
            CN VF  FFP LM+ L +S  +S+  C  N  T      NFGA                 
Sbjct: 410  CNSVFESFFPRLMNTLEISVTNSAGDCTLNENTFPSKKFNFGALYLCVELIAACRDLIMR 469

Query: 713  X-NIAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLS 889
              ++A +     ++  +ML+SF+  L +   S L ++N + VA   + +   VKGL+ L+
Sbjct: 470  SKDLAPKPDTPQETCRYMLQSFADSLVNAFSSSL-ATNANEVAHGAD-IYFKVKGLQILA 527

Query: 890  TFPSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARG 1069
            TFP    PIS+  + ++L ILMSII    ++  LW L LKALV IG +++    H+S + 
Sbjct: 528  TFPGDFLPISKFLFANILTILMSIILVDFNKILLWKLVLKALVHIGSFVDVY--HESEKA 585

Query: 1070 ICY-NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLVAC 1243
            + Y   VV+K +S++  +D  +  SLKL A SEI   G+ ++L I++ +E+AI++ L   
Sbjct: 586  LGYMGAVVDKTVSLVSRDDVKMPFSLKLEAASEIGASGRNHMLKIVQGMEEAIVAKLSDY 645

Query: 1244 IQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQ 1423
            + G LKS++  + LLECY +++L     +G  ++V ++F INIWN +E+   F+  V  +
Sbjct: 646  VHGNLKSAEKTIQLLECYCNKILSWINETGGLEEVLLRFVINIWNCVESCKDFSIQVQEE 705

Query: 1424 KVLDQVMITMKLLVAGCTVENQSLILKKAHCVI---LSMDFLKT---------------- 1546
            ++LD  M+ MKL +  C+ E+Q++I+ KA+ VI   +S+ F ++                
Sbjct: 706  ELLDATMMAMKLAIGSCSEESQNIIIHKAYSVISSSISIPFKESLDATSSIQLEELSVSE 765

Query: 1547 QPFQSIHG---IIALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPA 1717
            Q   S H    I   S RD+WI S F SV+IA+R +  + ++KGIL+LF+  + +G +PA
Sbjct: 766  QIDNSSHRDDQIDKFSLRDEWILSHFASVIIAVRPKAQIVNVKGILHLFMTTVLKGCVPA 825

Query: 1718 AQALASMVNKCPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQYNFLD------ 1879
            AQAL S++NK  +  NE   S   +L++A + I +  LW L  N  L+     +      
Sbjct: 826  AQALGSVINKLGTKSNETANSIDCTLEEAVDMIFRTKLWNLNENGVLRTCGSGNGSKVGL 885

Query: 1880 RDICSQRS--------IVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQ 2035
             D+C   S         V+G+AW+GKGLL+ GHEKV ++   L++CL+S+    I   + 
Sbjct: 886  TDLCLGFSSNKLLRVHAVVGLAWIGKGLLLLGHEKVKDVTKILLECLLSEGR--IRAMEL 943

Query: 2036 KENGKGVGMEWNS----SLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLP 2203
            K+     G+  NS    S+  SAADAFH+L++DSE CLN+KFHA  RPLYKQRFFS+++P
Sbjct: 944  KQ-----GLLENSYEQHSVMRSAADAFHILMSDSEVCLNRKFHAIARPLYKQRFFSTVMP 998

Query: 2204 ILLSSIKESGSTSKKIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKK 2383
            IL S I +S S+  +  L+RA  H+IS+ PL  +L+E+KK++P LLD L++   +   K 
Sbjct: 999  ILQSCIIKSDSSVCRSMLFRASAHLISNAPLIVILSEAKKLMPVLLDGLSLLSEDILDKD 1058

Query: 2384 IVYSLLLVLSGILMDDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLP 2563
             +YSLLLVLSGIL D NG+V ++EN H ++ CL +LI YP +M VRETA+QCL+A S LP
Sbjct: 1059 KLYSLLLVLSGILTDKNGQVAVIENAHILVNCLTRLIDYPHMMFVRETALQCLIATSELP 1118

Query: 2564 HARIFPFRPRVLKAVATALDDRKRAVRQEAVRCRQAW 2674
            +ARIFP R +VL+A+  ALDD KRAVRQEAVRCR+AW
Sbjct: 1119 YARIFPMRTQVLQAICKALDDPKRAVRQEAVRCRRAW 1155


>gb|EEE66671.1| hypothetical protein OsJ_23303 [Oryza sativa Japonica Group]
          Length = 1158

 Score =  552 bits (1423), Expect = e-154
 Identities = 344/902 (38%), Positives = 507/902 (56%), Gaps = 21/902 (2%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D LD  R+DLSK LM+A                                  ++C+  YG 
Sbjct: 238  DDLDATRDDLSKALMHAFCSTPYFEPFAIPLLLDKLSSSLPLAKLDSLKYLDNCIRCYGA 297

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCLETALSCFDS 364
             RM +H   IW  LKEVIF+ S ++ L T     DM+   N+I  EAL CL+TA+     
Sbjct: 298  DRMGRHVITIWFKLKEVIFSLSIDQILSTSGAK-DMEKNKNEIVSEALTCLKTAIIQMGP 356

Query: 365  SEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCNK 544
            S++D  + LI+ D DI + + S+ S  +   TS +    L A+G + + +A+ S Y C +
Sbjct: 357  SDEDRLINLILLDEDIVSSIHSVASEEASGLTSLQNPIQLHALGSVISILAESSAYFCTR 416

Query: 545  VFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXNIA 724
            V    F  L+D L +S    SQ          G +N+GA                     
Sbjct: 417  VLQAHFARLVDSLEISAGRESQHLNNCSGPSSGAINYGALYLSVQMLSSCREVALTYKEE 476

Query: 725  AEFIAESK-SWFFMLKSFSMDLCHVLGSVLR-SSNTSMVASEKEGVLCAVKGLRSLSTFP 898
               I  +K SW+ +L+     L H+L S+L   S     A  +E VLCAVKGL  L+TFP
Sbjct: 477  FSPIKSAKESWWLILEKKLDSLIHILQSLLTIDSQFVQSADRQEYVLCAVKGLIILATFP 536

Query: 899  SSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICY 1078
                P+S   YEDVL  L S+I  + +  +LW LSLKAL  IG  I     H S +   Y
Sbjct: 537  EPRLPLSASAYEDVLLTLTSVIMSKYENMHLWRLSLKALTTIGSSI--VEFHASQKENIY 594

Query: 1079 NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQY-VLSIIRALEDAIISSLVACIQGG 1255
            NKVV+KI S+ +   +++ L+L+L A  E+   G   +L I ++LE+A+++  V C    
Sbjct: 595  NKVVDKISSLDEPCRTSIPLNLRLEACFEVGTSGSNCMLRIAKSLEEAVVNGRVKC---- 650

Query: 1256 LKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQKVLD 1435
               S+ +V LLECY  RVLP     G  +++A+ F++ +WN++ +++  +  +  Q +L 
Sbjct: 651  ---SEYVVNLLECYCGRVLPWLFNFGGVNELALNFAMRLWNEIRDLATSDR-IGSQDLLS 706

Query: 1436 QVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLK----TQPFQSIHGIIAL-SCRDKW 1600
             +M+ MKL++  CT E QSLI++KA+  I SM  L     T+   ++   + L S RD +
Sbjct: 707  SLMMGMKLVIGICTEEQQSLIVQKAYDTISSMLSLPVKSMTRHLLAVDEAVPLYSVRDTF 766

Query: 1601 IASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCPSSINEPEIS 1780
            +  +  SV++ LR QTP+ DM  ++NLF + L +G +PAA ALAS+ NK   +++  E S
Sbjct: 767  LMCMLSSVIVGLRPQTPVPDMLMMINLFTVFLLKGQIPAAHALASIFNK---NLHNSEFS 823

Query: 1781 ARLSLDQACEDILKLCLWTLESNSHLKQY-------------NFLDRDICSQRSIVLGMA 1921
                LD+  + IL+ C  T+   S++K                 L   I S+  I+ G+A
Sbjct: 824  HENKLDKVIDTILERCFSTISVRSNMKTSLSCAGRSDDANCSEILSGSIESKDDIISGLA 883

Query: 1922 WVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSLATSAADA 2101
            W+GKGLLMRG EKV ++++FL+KCL SD +       Q+E+G  +     +SLATSAADA
Sbjct: 884  WLGKGLLMRGDEKVKDVSLFLLKCLCSDQSLAGISSHQEEHG--ISDSSYASLATSAADA 941

Query: 2102 FHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYRALGHII 2281
            FHV+++DSE CLNKKFHA I+PLYKQRFFS ++PI LS IKES   + K+ LYRA GHII
Sbjct: 942  FHVMMSDSEVCLNKKFHARIKPLYKQRFFSILMPIFLSKIKESTVMTTKLVLYRAFGHII 1001

Query: 2282 SDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKVTILENI 2461
            S+ P+ AV+ E+ +I+  ++D++A    +   K +VYS+LLVLSG+LMD+ GK  I+ENI
Sbjct: 1002 SNAPVPAVITEAHRILLVMVDSIAKLSQDVKDKDLVYSILLVLSGMLMDEKGKECIVENI 1061

Query: 2462 HTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALDDRKRAV 2641
            H ++  L +L+SYP +M+VRETA+QCLVAMS LPH++I+  RP+     +  L  R   +
Sbjct: 1062 HIIVSVLTQLVSYPHMMVVRETALQCLVAMSSLPHSKIYRMRPQACSCRSYKLQSRLLMI 1121

Query: 2642 RQ 2647
            R+
Sbjct: 1122 RK 1123


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  551 bits (1421), Expect = e-154
 Identities = 349/928 (37%), Positives = 514/928 (55%), Gaps = 27/928 (2%)
 Frame = +2

Query: 2    DDGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYG 181
            ++ +D++R DLS  LM A                                  + C   YG
Sbjct: 235  EEDIDVRRNDLSHALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSLKYLSDCTVKYG 294

Query: 182  GKRMVKHSRVIWSNLKEVIFNF--SPERPLLTDELDVDMKSEVNQIRMEALNCLETALSC 355
              RM KHS  IWS++KE+IF     P   + T+ L+     E N++  EAL  L+  +  
Sbjct: 295  ADRMKKHSEAIWSSVKEIIFTSIGQPNLSINTESLNSPSFQE-NEMTTEALRLLQKMVV- 352

Query: 356  FDSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYC 535
               +    FL LII+D D+      L   T Y     + ++ L+A+G I  + A  S+  
Sbjct: 353  ---ASNGLFLTLIINDEDVKDIFNILNIYTCYKDFPLQSRQRLNAVGHILYTSASASVAS 409

Query: 536  CNKVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXX 715
            C+ VF  +F  L+D +G+S +      I+  +     +NFGA                  
Sbjct: 410  CDHVFESYFHRLLDFMGISVDQYHNDKISPIRN----LNFGALYLCIEVIAACRNLIVSS 465

Query: 716  NIAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTF 895
            +     + E    + ML+ FS  +  +L S   S        + E   CAVKGL +LSTF
Sbjct: 466  DENTCSVKEKS--YSMLQIFSCSVVQLLSSTF-SGIVKRDLHDAE-FYCAVKGLLNLSTF 521

Query: 896  PSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGIC 1075
            P   SP+S   +ED+L   MS IT       LWN +LKAL  IG +++   G   ++   
Sbjct: 522  PVGSSPVSRVIFEDILLEFMSFITVNFKFGSLWNHALKALQHIGSFVDKYPGSVESQSYM 581

Query: 1076 YNKVVEKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSLVAC-IQ 1249
            +  VVEKI  M   +D  + L LKL    +I   G+ Y+L I+  +E+ I  +L    + 
Sbjct: 582  HI-VVEKIALMFSPHDEVLPLMLKLEMAVDIGRTGRSYMLKIVGGIEETIFYNLSEVYVY 640

Query: 1250 GGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNT--DVTMQ 1423
            G  KS + ++ LL+CY++++LP    +G F++V ++F++NIW+Q+E  S F+T  D  +Q
Sbjct: 641  GNSKSVEIVLSLLDCYSTKILPWFDEAGDFEEVILRFALNIWDQIEKCSTFSTSMDKCIQ 700

Query: 1424 KVLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFL-------KTQPFQSIHGIIAL 1582
             +LD  M+ +KL V  C+ E+Q++I++KA  V+L+  F         T P Q + G+  L
Sbjct: 701  VLLDATMMALKLSVRSCSKESQNIIVQKAFNVLLTSSFSPLKVTLSNTIPVQ-MEGLQFL 759

Query: 1583 ------SCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVN 1744
                  + RD+WI SLF SV IALR Q  + D++ I+ L ++    G +PAAQAL SM+N
Sbjct: 760  QQKDNPTSRDEWILSLFASVTIALRPQVHVPDVRLIIRLLMLSTTRGCVPAAQALGSMIN 819

Query: 1745 KCPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQYNFLDRDICS--------QR 1900
            K     ++ E+S+ +SL++A + I K     L + S          D+CS        Q 
Sbjct: 820  KLSVKSDKVEVSSYVSLEEAIDIIFKTEFRCLHNESTGDGSEMFLTDLCSSIEKSSLLQV 879

Query: 1901 SIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNSSL 2080
              V+G++W+GKGLL+ GH+KV +I M  ++ LVS S  D +  QQ +  K      + ++
Sbjct: 880  HAVVGLSWIGKGLLLCGHDKVRDITMVFLQLLVSKSRTDASPLQQFKLEKDNETSLDFAV 939

Query: 2081 ATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALY 2260
               AA+AFH+L++DSE CLN+KFHA +RPLYKQRFFS+M+PI  + + +S ++  +  LY
Sbjct: 940  MKGAAEAFHILMSDSEACLNRKFHAIVRPLYKQRFFSTMMPIFQTLVSKSDTSLSRYMLY 999

Query: 2261 RALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGK 2440
            +A  H+ISDTPL A+L+++KK IP LLD L        +K +VYSLLLVLSGILMD NG+
Sbjct: 1000 QAYAHVISDTPLTAILSDAKKFIPMLLDGLLTLSVNGINKDVVYSLLLVLSGILMDKNGQ 1059

Query: 2441 VTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATAL 2620
              + EN H +++CL  L  +  +M+VRETAIQCLVA+S LPHARI+P R +VL  ++ AL
Sbjct: 1060 EAVTENAHKIVDCLAGLTDFSHMMLVRETAIQCLVAVSELPHARIYPMRRQVLHVISKAL 1119

Query: 2621 DDRKRAVRQEAVRCRQAWASIASRSLQF 2704
            DD KR+VRQEAVRCRQAWASIASRSL F
Sbjct: 1120 DDPKRSVRQEAVRCRQAWASIASRSLHF 1147


>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
            tuberosum]
          Length = 1170

 Score =  550 bits (1416), Expect = e-153
 Identities = 350/966 (36%), Positives = 526/966 (54%), Gaps = 66/966 (6%)
 Frame = +2

Query: 5    DGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYGG 184
            D +D+KR +LS+ LM A                                  + C   YGG
Sbjct: 238  DDVDMKRGELSRALMLAFASTPLYEPSVIPLLLDKLSSSLPSAKVESLKYLSYCTLKYGG 297

Query: 185  KRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVD-MKSEVNQIRMEALNCLETALSCFD 361
             RM K+++ +WS LK+ +F   P+  L  D   +D +    ++I  +AL  L+  +    
Sbjct: 298  DRMEKYTKSLWSALKDALFT-CPQSTLSEDSDPIDGLGFHESEIMTQALELLQVLVR--- 353

Query: 362  SSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYCCN 541
                DSFL LI+ D DI T L S +    ++  S + ++ L A+G + +   K S   CN
Sbjct: 354  -QHNDSFLSLILGDGDISTFLNSFSQFDDFNSLSTQYKQRLHAVGHVLSVCIKASGSSCN 412

Query: 542  KVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXXXXXXXXN- 718
            KVF  FFP L+D L +S  +S       H  +    NFGA                  + 
Sbjct: 413  KVFESFFPRLVDALRLSVENSHGIV---HSALDANFNFGALYLCVELLAACRQLVVSSDE 469

Query: 719  IAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLSTFP 898
            +A+       SW  +L+SF   LC+V   ++R+S   + ++    V  AVKGL  L TFP
Sbjct: 470  VASAHDLARDSWCQILRSFCTSLCNVFFCLIRAS--CVESTWNAYVYAAVKGLEILGTFP 527

Query: 899  SSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARGICY 1078
             S   +S+  YE++L  L SII    ++ +LW  +LKALV+I L++     H+  +   +
Sbjct: 528  GSFISVSKLMYENILLTLTSIIESDFNKKFLWKAALKALVEISLFVNKY--HEDEKAAIF 585

Query: 1079 NKVV-EKILSMLQTNDSTVSLSLKLVAISEIANVGQ-YVLSIIRALEDAIISSL------ 1234
            N +V +KI+S++ ++D  +  SLKL AI +I   G+ ++ S++  LE  I ++L      
Sbjct: 586  NSIVKQKIVSLISSDDLNMPQSLKLEAIFDIGLTGKSFMHSVVSELEKTISANLSEILVR 645

Query: 1235 -------------------------VACIQGGLKSSDSLVGLLECYTSRVLPRCCTSGSF 1339
                                     +  + G  + +    GLLECY+++VLP    +G  
Sbjct: 646  VLIETSRLLLTYHMHRLFNFGALFLLLQVHGDRRLAGLTPGLLECYSNKVLPWFHGNGGA 705

Query: 1340 DDVAVQFSINIWNQLENVSVFNTDVTMQKVLDQVMITMKLLVAGCTVENQSLILKKAHCV 1519
            D+V++ F+INI+ ++EN S  + +   +++L   M  MK  + GC+VE+Q  +L+KA  V
Sbjct: 706  DEVSLSFAINIFTKMENNSSLSLEAKGKELLGATMAAMKQAMTGCSVESQEKVLQKAIDV 765

Query: 1520 ILSMDFL--------------KTQPFQSIHGIIALSCRDKWIASLFGSVVIALRSQTPLT 1657
            + +  F               KTQ  Q+  G   LSCRD+WI SLF SVVIALR QT + 
Sbjct: 766  METSSFFLSNDLILGTDLFNKKTQLGQTSEG---LSCRDEWITSLFASVVIALRPQTQIP 822

Query: 1658 DMKGILNLFLILLPEGNLPAAQALASMVNKCPSSINEPEISARLSLDQACEDILKLCLW- 1834
            +++ +L L  + L EG++P+AQAL S+VNK P +I+E       SL++  + + K  +W 
Sbjct: 823  NIRLLLQLLAMTLLEGHIPSAQALGSLVNKLPLNISED-----CSLEELIDTLFKNVMWR 877

Query: 1835 -------------TLESNSHLKQYNFLDRDICSQRSIVLGMAWVGKGLLMRGHEKVTEIA 1975
                            SN  L   N            V+G AW+GKGLLMRGHEK+ ++ 
Sbjct: 878  NISIGKEGNDGGAVAMSNLRLNSLN---------SHAVIGFAWIGKGLLMRGHEKLKDVT 928

Query: 1976 MFLMKCLVSDSNEDITL---QQQKENGKGVGMEWNSSLATSAADAFHVLLNDSEDCLNKK 2146
            M  + CLVS+ ++   L    Q K+  +   +     L  SAADAFH+L++DS+ CLN+ 
Sbjct: 929  MTFLSCLVSNEDQGNLLPFNDQMKDPAEHKVL----CLRKSAADAFHILMSDSDACLNRN 984

Query: 2147 FHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIALYRALGHIISDTPLAAVLAESKKI 2326
            +HA +RPLYKQRFF+ M+P+ LS+I +  S++ +  LY+A  H++S+TPL AV+ ++KK+
Sbjct: 985  YHAIVRPLYKQRFFNIMMPMFLSAIVKCDSSTSRCFLYQAFAHLVSETPLVAVVGDAKKV 1044

Query: 2327 IPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDNGKVTILENIHTVIECLIKLISYPD 2506
            +P L+D   +   + SHK+I+YS+L+VLSGIL D NG+  I+EN   VI  LI+L SYP 
Sbjct: 1045 LPVLMDCFLVLSKDISHKEIIYSVLIVLSGILTDKNGQEAIIENAPMVIRRLIELTSYPY 1104

Query: 2507 LMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVATALDDRKRAVRQEAVRCRQAWASIA 2686
            +M++RETAIQCL AMS LPHARI+P R +VL+A+  ALDD KRAVR EAV+CR AWASIA
Sbjct: 1105 VMVIRETAIQCLGAMSELPHARIYPMRTQVLQAITKALDDPKRAVRLEAVKCRLAWASIA 1164

Query: 2687 SRSLQF 2704
            SRS+ F
Sbjct: 1165 SRSIHF 1170


>gb|EMS62733.1| MMS19 nucleotide excision repair protein-like protein [Triticum
            urartu]
          Length = 1066

 Score =  539 bits (1388), Expect = e-150
 Identities = 329/860 (38%), Positives = 502/860 (58%), Gaps = 21/860 (2%)
 Frame = +2

Query: 158  NSCLYHYGGKRMVKHSRVIWSNLKEVIFNFSPERPLLTDELDVDMKSEVNQIRMEALNCL 337
            ++C++ YG  RMV H+  IW  LKEV+F+ S ++ LL+     D ++  NQI  EA +CL
Sbjct: 239  DNCIHCYGADRMVTHASAIWFKLKEVLFSLSSDQ-LLSSGSPKDAENNKNQIISEAEHCL 297

Query: 338  ETALSCFDSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIA 517
            +TA++   SS++D F+ LI+ D DI   + S+T+  +  G+S      L A+G + + +A
Sbjct: 298  KTAVTYIHSSDRDIFINLILLDEDIVNNIHSVTTEENSIGSS------LQALGSVVSILA 351

Query: 518  KVSIYCCNKVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGGMNFGAXXXXXXXXXXXX 697
              S Y C +VF   F  L+D+LG S    SQ     + +    +N+GA            
Sbjct: 352  GSSTYLCTRVFQAHFKRLVDILGNSAGFDSQHLSIANGSSPASINYGALYLSVQMLSSCR 411

Query: 698  XXXXXXNIAAEFIAESKSWFFMLKSFSMDLCHVLGSVLR-SSNTSMVASEKEGVLCAVKG 874
                    + E +   +SW+ +L+     + H+ G +L   S  +  A  KE +  AVKG
Sbjct: 412  EVAVA---SREGVPAEESWWLILEEKLDQIIHLFGKLLTIDSQPTQSAVRKECISFAVKG 468

Query: 875  LRSLSTFPSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGH 1054
            L  L+T P  CS + E  YE++L +L  +IT + +  +LW LSLK L  IG    +   H
Sbjct: 469  LLILATIPEQCSLLLENAYENILLMLTLVITSKYENAHLWRLSLKTLTSIGS--SAVELH 526

Query: 1055 DSARGICYNK-VVEKILSMLQTNDSTVSLSLKLVAISEIANVG-QYVLSIIRALEDAIIS 1228
             S R + YN+ VV+KI+ + ++ D+++ L+L+L A  E+      Y+L +          
Sbjct: 527  ASKREMVYNRIVVDKIIRLAESCDASMPLNLRLEACFEVGTASVNYMLRV---------- 576

Query: 1229 SLVACIQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNT 1408
                   G ++ +D +  L++ Y+SR+LP   TSG  +++A+ F++ +W+++ ++   + 
Sbjct: 577  ------NGSIECADYVTCLIDFYSSRLLPWFFTSGGLNELALSFALRLWDEIGDLVTLDR 630

Query: 1409 DVTMQKVLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLK----TQPFQSIHGII 1576
             ++ Q +LD +M+ MKLLV  CT E QSLI++KA  ++ SM  L     T+   S+  ++
Sbjct: 631  IIS-QGLLDSLMMGMKLLVRVCTEEQQSLIVQKACGIVSSMLSLPVKALTRHLLSVDELV 689

Query: 1577 -ALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNKCP 1753
             A S +D  +  +  SV++ L  QTP+ +M  ++NLF + L  G++PAA ALAS+ NK  
Sbjct: 690  PAHSVQDTALVCMLSSVIVGLWPQTPVPEMMMMINLFSVFLLNGHIPAAHALASIFNKY- 748

Query: 1754 SSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQY----------NFLDR---DICS 1894
              +   E S  + LD+  + IL  C   +  +S+LK            NF D     I S
Sbjct: 749  --LQNSEFSHEIKLDKILDVILGGCFSIVLPSSNLKMSCSPAATLDNANFSDSLPGSIGS 806

Query: 1895 QRSIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGMEWNS 2074
            +  I+ G+AW+GKGLLMRG EKV EI++FL+KCL SD+                      
Sbjct: 807  KIDILCGLAWIGKGLLMRGDEKVKEISLFLLKCLSSDA---------------------- 844

Query: 2075 SLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSKKIA 2254
            SLAT+AADAFHV++ DSE CLNKKFHA I+ LYKQRFFS ++PI LS +KE+   + K+ 
Sbjct: 845  SLATAAADAFHVMMGDSEVCLNKKFHARIKFLYKQRFFSILMPIFLSKLKETSELTTKLV 904

Query: 2255 LYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILMDDN 2434
            +YRA GHII++ P++AV+ E+ +I+  ++D LA    +   K +VYSLLLVLSG+LMD+ 
Sbjct: 905  IYRAFGHIITNAPVSAVITEAHQILLVMIDILAKLSVDIQDKDLVYSLLLVLSGMLMDEK 964

Query: 2435 GKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKAVAT 2614
            GK  I+ENI  +I  L +L+SYP +M+VRETA+QC VAMS  PH++++  R +VL+A   
Sbjct: 965  GKECIVENIRIIISVLAQLVSYPHMMVVRETALQCFVAMSSFPHSKVYRMRSQVLQAAIK 1024

Query: 2615 ALDDRKRAVRQEAVRCRQAW 2674
            ALDD+KRAVRQEAVRCRQ W
Sbjct: 1025 ALDDKKRAVRQEAVRCRQTW 1044


>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
            gi|550342418|gb|ERP63247.1| hypothetical protein
            POPTR_0003s04720g [Populus trichocarpa]
          Length = 913

 Score =  537 bits (1383), Expect = e-149
 Identities = 335/879 (38%), Positives = 505/879 (57%), Gaps = 39/879 (4%)
 Frame = +2

Query: 164  CLYHYGGKRMVKHSRVIWSNLKEVIFNFSPERPL-LTDELDVDMKSEVNQIRMEALNCLE 340
            C   YG +R+ KH+  IWS+LK+VIF       L  T E    +  + N+I  EAL  LE
Sbjct: 57   CTSKYGAERIAKHAGAIWSSLKDVIFTSGQSFVLSFTPESLGGLGCQENEIAAEALALLE 116

Query: 341  TALSCFDSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAK 520
              +        D F  +I+ D +I   L S+T   SY+    +  + L ++G I     K
Sbjct: 117  KVVI----QNNDLFSSMIVGDEEINMVLNSITGCQSYNEIPLQSTQKLYSVGRILYVSVK 172

Query: 521  VSIYCCNKVFLKFFPCLMDVLG---VSRNHSSQF---CITNHKTVHGGMNFGAXXXXXXX 682
             S+  C+++F  FF CLM+ +G   V+ + +  F   CI + +  HG +           
Sbjct: 173  ASVASCSRIFQYFFSCLMESMGLPVVNGSGTCSFNDDCIISKRPNHGSLYL----CVELL 228

Query: 683  XXXXXXXXXXXNIAAEFIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLC 862
                       ++A++ ++ +++W  +L+ FS  L  +  S L +S T   A + + V  
Sbjct: 229  GACRDLVISSGDLASQCVSANETWCCLLQRFSTSLSKIFSSTLATS-TDKPAHDAD-VYL 286

Query: 863  AVKGLRSLSTFPSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIES 1042
             VKGL+ L+TFP     +S+   E +L   +SIIT   ++T LW LS+KALVQIGL+I  
Sbjct: 287  GVKGLQILATFPGGYLLVSKSTCESILMTFVSIITVDFNKTLLWKLSVKALVQIGLFIHG 346

Query: 1043 ASGHDSARGICY-NKVVEKILSMLQTNDSTVSLSLKLVAISEIANVG-QYVLSIIRALED 1216
            ++  +S + + Y + VV+KI+SM+ +++  +   L+L AIS+I   G QY+L I+  L++
Sbjct: 347  SN--ESEKSMSYMDIVVQKIVSMISSDNHDIPFQLQLEAISDIGTSGLQYMLKIVTGLQE 404

Query: 1217 AIISSLVACIQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVS 1396
             I ++L A +QG +KS+  ++ LLECY++ +LP       F++V +QF ++IWNQ+EN  
Sbjct: 405  VIRANL-AEVQGNVKSAKVIIHLLECYSNELLPWIQKYEVFEEVLLQFVVSIWNQIENCM 463

Query: 1397 VFNTDVTMQKVLDQVMITMKLLVAGCTVENQSLILKKAHCVILSMDFLKT---------- 1546
             F   +  +++LD  M  MKL VA C+VE+Q++I+ KA+ V+ S  FL T          
Sbjct: 464  AFPDGIFEKELLDATMKVMKLAVASCSVESQNIIIDKAYTVLSSSTFLSTKDSLSSLQAQ 523

Query: 1547 -QPFQSIHGIIALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQ 1723
             +  +        S RD+WI SLF SV+IAL  QT + +++ +L+  +I+  +G + AAQ
Sbjct: 524  LEELEDTQETNKFSSRDEWIHSLFISVIIALHPQTRIPNIRTVLHFLMIVFLKGYVTAAQ 583

Query: 1724 ALASMVNKCPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLKQYNFLDRDICSQRS 1903
            AL S+VNK     +  E S   + ++A + I       L S+ H+           S+  
Sbjct: 584  ALGSLVNKLDLKTSGTEYSGGCTFEEAMDIIFGK---NLSSSDHVSAGRSGITGYWSETG 640

Query: 1904 I-----------------VLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQ 2032
            +                 ++G+AW+GKGLLMRGHEKV +I +  ++CL S+      L  
Sbjct: 641  LTNLCLGAANSGLLEIHSIVGLAWIGKGLLMRGHEKVKDITIVFLECLQSNGRRG-ALPL 699

Query: 2033 QKENGKGVGMEWNSSLAT--SAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPI 2206
            ++ N       W+  L+    AADAF VL++DSE CLN+KFHA IRPLYKQRFFS+++PI
Sbjct: 700  EENN-----CNWDMRLSAMKCAADAFQVLMSDSELCLNRKFHAIIRPLYKQRFFSTIMPI 754

Query: 2207 LLSSIKESGSTSKKIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKI 2386
            L S I +S S   +  LYRA  +++  TPL  +L ++KK+IP +LD+L +   +   K I
Sbjct: 755  LQSLIIQSDSLLSRSMLYRAFANVVIGTPLIVILNDAKKLIPMVLDSLKLLSKDVLDKDI 814

Query: 2387 VYSLLLVLSGILMDDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPH 2566
            +YSLLLVLSGIL D NG+  ++EN H +I  LI  ++YP  M+VRET IQCLVAMS LPH
Sbjct: 815  MYSLLLVLSGILTDKNGQEGVIENAHIIINYLIGFVTYPHTMLVRETTIQCLVAMSELPH 874

Query: 2567 ARIFPFRPRVLKAVATALDDRKRAVRQEAVRCRQAWASI 2683
             RI+P R +VL+AV+ ALDD KRAVRQEAVRCRQAW+ I
Sbjct: 875  TRIYPMRIQVLQAVSKALDDPKRAVRQEAVRCRQAWSVI 913


>ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304108 [Fragaria vesca
            subsp. vesca]
          Length = 1149

 Score =  537 bits (1383), Expect = e-149
 Identities = 349/927 (37%), Positives = 510/927 (55%), Gaps = 32/927 (3%)
 Frame = +2

Query: 2    DDGLDIKREDLSKGLMNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCLYHYG 181
            D+  ++KREDLSK LM+A                                  N C   YG
Sbjct: 235  DEDANVKREDLSKALMSAFSSTALFEPFVIPLLLEKLSSSLPLAKVDSLKYLNYCASRYG 294

Query: 182  GKRMVKHSRVIWSNLKEVIFNFSPERPL--LTDELDVDMKSEVNQIRMEALNCLETALSC 355
             +RM KH+  IW ++K  I N S E P    T E  V +  E N+I  EAL  L+     
Sbjct: 295  AERMAKHAETIWISIKHAISN-SLEVPAKSFTAEPLVGLGFEENEIVTEALILLQNVTMQ 353

Query: 356  FDSSEQDSFLCLIIDDPDIGTKLESLTSITSYSGTSAEIQRDLSAIGGIFTSIAKVSIYC 535
             D+      L LI+ D DI   + S+ S  SY+   ++ ++ L A+G IF  I K S+  
Sbjct: 354  NDAL----LLSLIVRDEDINNVINSIASHESYTNIPSQGRQSLHAVGRIFFIITKTSMAS 409

Query: 536  CNKVFLKFFPCLMDVLGVSRNHSSQFCITNHKTVHGG-MNFGAXXXXXXXXXXXXXXXXX 712
            CN+VF  FFP LM  L +S  +SS+ C     +       FGA                 
Sbjct: 410  CNRVFESFFPSLMKTLEISMGNSSKDCTLKENSFSSKRFKFGALYFCVEFIAACRDLIMR 469

Query: 713  XNIAAE-FIAESKSWFFMLKSFSMDLCHVLGSVLRSSNTSMVASEKEGVLCAVKGLRSLS 889
             N   E F    ++   ML+S +  L     + L  +  S   ++   +   VKGL+ L+
Sbjct: 470  TNDHDEKFGTADETCCCMLQSSAPTLITAFCTTL--AQISCNVADDADIYFKVKGLQMLA 527

Query: 890  TFPSSCSPISEGCYEDVLEILMSIITGRSDETYLWNLSLKALVQIGLWIESASGHDSARG 1069
            TFP     I +  +E+VL+ LMSII    D+  LW L+LKAL  IG +++     + A+ 
Sbjct: 528  TFPGYFLQIPKAMFENVLKTLMSIILVDFDKPLLWKLALKALAHIGSFVDVHLESEKAQS 587

Query: 1070 ICYNKVVEKILSMLQTNDSTVSLSLKLVAISEI-ANVGQYVLSIIRALEDAIISSLVAC- 1243
               + VVEK +S+ Q +D  V   LKL A+ EI A+   ++L II+ LEDAI+++L    
Sbjct: 588  YT-SFVVEKTISLPQ-DDFDVPFPLKLEAVFEIGASRPNHMLRIIQGLEDAIVANLSKTF 645

Query: 1244 IQGGLKSSDSLVGLLECYTSRVLPRCCTSGSFDDVAVQFSINIWNQLENVSVFNTDVTMQ 1423
            I G LK+++  + LLECY+++++     +G  ++V  +F I+IWN LE     +  V  +
Sbjct: 646  IHGDLKAAEKTIQLLECYSNKIISWIDENGGLEEVLCRFVISIWNCLERCKDSSNQVQDK 705

Query: 1424 KVLDQVMITMKLLVAGCTVENQSLILKKAHCVILS------------MDFLKTQPFQSIH 1567
             +LD  M  MKL V  C+ E+Q++I++KA+  + S                K +      
Sbjct: 706  GLLDATMTAMKLAVGSCSEESQNIIIQKAYGALSSGISIPFKDSTDDSSLAKLETLHLFE 765

Query: 1568 GIIALSCRDKWIASLFGSVVIALRSQTPLTDMKGILNLFLILLPEGNLPAAQALASMVNK 1747
             +  LS RD+WI SLF SV+IA+R +TP+ + KGIL+LF+  L +G  PAAQAL S++NK
Sbjct: 766  QLDKLSPRDEWIFSLFASVIIAMRPRTPIANAKGILHLFMTALVKGCTPAAQALGSVINK 825

Query: 1748 CPSSINEPEISARLSLDQACEDILKLCLWTLESNSHLK------QYNFLDRDICS----- 1894
                 NE  IS   +L++A   I +  LW +  N  L+        N    ++C      
Sbjct: 826  LGIQSNEITISTACTLEEAMGIIFRSKLWNIGENGVLRGSGTSHSRNVGLTELCLGVSSN 885

Query: 1895 ---QRSIVLGMAWVGKGLLMRGHEKVTEIAMFLMKCLVSDSNEDITLQQQKENGKGVGME 2065
               Q  ++ G+AW+GKGLL+ G+E+V ++   ++ CL++D   D +  +Q   G      
Sbjct: 886  KLLQVHVITGLAWIGKGLLLIGNEQVKDVTKIILDCLLADDKVDTSELRQ---GLLETSS 942

Query: 2066 WNSSLATSAADAFHVLLNDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESGSTSK 2245
               S+  +AADAFH+L++DS+ CLN+KFHA IRPLYKQRFFS+++PIL S I +S S+  
Sbjct: 943  EQPSVMRTAADAFHILMSDSDVCLNRKFHANIRPLYKQRFFSTVMPILHSLIVKSDSSLS 1002

Query: 2246 KIALYRALGHIISDTPLAAVLAESKKIIPALLDTLAISGSETSHKKIVYSLLLVLSGILM 2425
            +  L+RA  H+IS+ PL  +L+E+KK++  LLD L+I   +   K  +YSLLLVLSGIL 
Sbjct: 1003 RSMLFRASAHLISNAPLIVILSEAKKLMKVLLDGLSILSDDILDKDKLYSLLLVLSGILT 1062

Query: 2426 DDNGKVTILENIHTVIECLIKLISYPDLMIVRETAIQCLVAMSVLPHARIFPFRPRVLKA 2605
            D  G+  +LEN H +I+CL +L++YP +M+VRETAIQCL+AMS LP  RIFP + +VL+A
Sbjct: 1063 DKCGEEAVLENAHIIIDCLSRLVAYPHMMLVRETAIQCLLAMSELPRPRIFPLKSQVLQA 1122

Query: 2606 VATALDDRKRAVRQEAVRCRQAWASIA 2686
            +  ALDD KRAVR+EAVRCR AW S A
Sbjct: 1123 IFKALDDPKRAVREEAVRCRHAWTSTA 1149