BLASTX nr result

ID: Zingiber23_contig00027338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00027338
         (719 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006651586.1| PREDICTED: transcription initiation factor T...    60   5e-07

>ref|XP_006651586.1| PREDICTED: transcription initiation factor TFIID subunit 8-like,
           partial [Oryza brachyantha]
          Length = 323

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
 Frame = -3

Query: 684 YNEKEVSEVVIPQEVESVKRSVEFETFVPELETSKVGSLDF------NDSEKSILPCNRP 523
           Y EK VSEV +P   +S       E F P  E SK G LD       N S+K ++P  RP
Sbjct: 211 YGEKVVSEVAMPGVGKSFS---VIEAFAPAFEESKDGELDEGMDQDQNQSQKRVVPRERP 267

Query: 522 AIRFKIGVDKISIATLLSTNMLDTKRNSLFMMXXXXXXXXXXXENIVKEVLDKPHYLTQL 343
            + F+IG+DK S+   L++  L  +++  F+              I++E ++ PH L QL
Sbjct: 268 PVYFRIGIDKKSMVMALNSRALSDQKDLWFLKEEKEQRAEL----ILREAMENPHELAQL 323


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