BLASTX nr result

ID: Zingiber23_contig00027110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00027110
         (222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF87872.1| unknown [Zea mays] gi|414885183|tpg|DAA61197.1| T...    57   3e-06
ref|NP_001140205.1| hypothetical protein [Zea mays] gi|194695366...    57   3e-06
ref|XP_003572180.1| PREDICTED: uncharacterized protein LOC100844...    55   8e-06

>gb|ACF87872.1| unknown [Zea mays] gi|414885183|tpg|DAA61197.1| TPA: hypothetical
           protein ZEAMMB73_556811 [Zea mays]
          Length = 219

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +1

Query: 85  HRRDADPEEGRRRNTGGALATDTAASFLTACGLCRRQLGPGRDTFM 222
           H R A    G RRN+    A +TAA FL ACGLCRR+LGPGRDTFM
Sbjct: 79  HARAAPARAGLRRNSADYSAVETAA-FLRACGLCRRRLGPGRDTFM 123


>ref|NP_001140205.1| hypothetical protein [Zea mays] gi|194695366|gb|ACF81767.1| unknown
           [Zea mays] gi|195613510|gb|ACG28585.1| hypothetical
           protein [Zea mays] gi|224034197|gb|ACN36174.1| unknown
           [Zea mays] gi|414885182|tpg|DAA61196.1| TPA:
           hypothetical protein ZEAMMB73_556811 [Zea mays]
          Length = 181

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +1

Query: 85  HRRDADPEEGRRRNTGGALATDTAASFLTACGLCRRQLGPGRDTFM 222
           H R A    G RRN+    A +TAA FL ACGLCRR+LGPGRDTFM
Sbjct: 79  HARAAPARAGLRRNSADYSAVETAA-FLRACGLCRRRLGPGRDTFM 123


>ref|XP_003572180.1| PREDICTED: uncharacterized protein LOC100844787 [Brachypodium
           distachyon]
          Length = 163

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/92 (41%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
 Frame = +1

Query: 1   TSSMAEFAPSD-----------AAAQLRPSDRLLRQQPSHRRDADPEEGR-------RRN 126
           T+SM EFAP D           A A    +DRL   +      A    GR       RRN
Sbjct: 12  TTSMTEFAPPDVLAGVAEEQEEAMAAEETTDRLQVHEEKEEEIAHGWIGRGYRARPHRRN 71

Query: 127 TGGALATDTAASFLTACGLCRRQLGPGRDTFM 222
           +    A    A+FL ACGLC R+LGPGRDTFM
Sbjct: 72  SADFSAAVETAAFLHACGLCNRRLGPGRDTFM 103


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