BLASTX nr result

ID: Zingiber23_contig00026913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00026913
         (816 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006477644.1| PREDICTED: filaggrin-like isoform X1 [Citrus...    58   5e-06
ref|XP_006440723.1| hypothetical protein CICLE_v100184612mg [Cit...    57   6e-06

>ref|XP_006477644.1| PREDICTED: filaggrin-like isoform X1 [Citrus sinensis]
            gi|568847649|ref|XP_006477645.1| PREDICTED:
            filaggrin-like isoform X2 [Citrus sinensis]
            gi|568847651|ref|XP_006477646.1| PREDICTED:
            filaggrin-like isoform X3 [Citrus sinensis]
            gi|568847653|ref|XP_006477647.1| PREDICTED:
            filaggrin-like isoform X4 [Citrus sinensis]
          Length = 1821

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
 Frame = -2

Query: 584  DESFRGRSHFAGHAVCNNPMNATEKI------VVEAEDLSKHAXXXXXXXXXFNGSTAQY 423
            D+++ G+S +  H+  N+  NA  ++      + E    S H           + S   Y
Sbjct: 915  DQAYFGQSKYFSHSGKNSMDNAKGRLQGDMKCMDEGPSRSMHPGYAPLASASVDKSVGNY 974

Query: 422  AQNETISQASNMLELLHKVDRSRD---VNSMNSSDRSAQVADDVSAAQPHVD-----LSS 267
            A N T   + NMLELLHKVD+S++     + +S+DR+     +   +   VD      SS
Sbjct: 975  APNRTAPSSQNMLELLHKVDQSKEHSHATNFSSTDRNQSQIPEAEISDGSVDHLQQNQSS 1034

Query: 266  ISRGFGXXXXXXXXXXXSIKSPISHNLLNDPMIAQSSHQGEASYQDQAQSNYASLARPLA 87
             S+GFG             +  I+ N ++    +Q+S        D  +  ++ LA   +
Sbjct: 1035 ASQGFGLQLGPPSQ-----RLSIADNAISSQSSSQASLSSTRVISDMGRRGHSWLASTAS 1089

Query: 86   L--LHESSETQNWDK---ISNPPGHQQN 18
            +  LH S ET   D    IS+  G   N
Sbjct: 1090 VQSLHTSHETYQGDSRNHISSASGQISN 1117


>ref|XP_006440723.1| hypothetical protein CICLE_v100184612mg [Citrus clementina]
            gi|557542985|gb|ESR53963.1| hypothetical protein
            CICLE_v100184612mg [Citrus clementina]
          Length = 1810

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
 Frame = -2

Query: 584  DESFRGRSHFAGHAVCNNPMNATEKI------VVEAEDLSKHAXXXXXXXXXFNGSTAQY 423
            D+++ G+S +  H+  N+  NA  ++      + E    S H           + S   Y
Sbjct: 915  DQAYFGQSKYFSHSGKNSMDNAKGRLQGDMKCMDEGPSRSMHPGYAPLASASVDKSVGNY 974

Query: 422  AQNETISQASNMLELLHKVDRSRD---VNSMNSSDRSAQVADDVSAAQPHVD-----LSS 267
            A N T   + NMLELLHKVD+S++     + +S+DR+     +   +   VD      SS
Sbjct: 975  APNRTAPSSQNMLELLHKVDQSKEHSHATNFSSTDRNQSQIPEAEISDGSVDHLQQNQSS 1034

Query: 266  ISRGFGXXXXXXXXXXXSIKSPISHNLLNDPMIAQSSHQGEASYQDQAQSNYASLARPLA 87
             S+GFG             +  I+ N ++    +Q+S        D  +  ++ LA   +
Sbjct: 1035 ASQGFGLQLGPPSQ-----RLSIADNAISSQSSSQASLSSTRVSSDMGRRGHSWLASTAS 1089

Query: 86   L--LHESSETQNWDK---ISNPPGHQQN 18
            +  LH S ET   D    IS+  G   N
Sbjct: 1090 VQSLHTSHETYQGDSRNHISSASGQISN 1117


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