BLASTX nr result
ID: Zingiber23_contig00026731
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00026731
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sat... 124 2e-26
gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japo... 124 2e-26
gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indi... 124 2e-26
gb|EMS62218.1| Pre-mRNA-splicing factor SF2 [Triticum urartu] 123 2e-26
ref|XP_006417608.1| hypothetical protein EUTSA_v10008203mg [Eutr... 122 5e-26
ref|XP_006417607.1| hypothetical protein EUTSA_v10008203mg [Eutr... 122 5e-26
ref|XP_006417606.1| hypothetical protein EUTSA_v10008203mg [Eutr... 122 5e-26
ref|XP_004984425.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 122 5e-26
ref|XP_004984424.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 122 5e-26
gb|EMT26128.1| Pre-mRNA-splicing factor SF2 [Aegilops tauschii] 122 6e-26
gb|EMS45263.1| Pre-mRNA-splicing factor SF2 [Triticum urartu] 122 6e-26
dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica G... 122 6e-26
ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group] g... 122 6e-26
gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indi... 121 1e-25
ref|XP_006305406.1| hypothetical protein CARUB_v10009803mg, part... 120 2e-25
ref|XP_006658109.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 120 2e-25
gb|EMT33521.1| Pre-mRNA-splicing factor SF2 [Aegilops tauschii] 119 3e-25
gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea ... 119 3e-25
ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 119 3e-25
gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea... 119 3e-25
>dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 124 bits (310), Expect = 2e-26
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1
Query: 200 QGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRD 21
+G MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLKIPPRPPG+AFVEFEDPRD
Sbjct: 64 EGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRD 123
Query: 20 AEDAIR 3
AEDAIR
Sbjct: 124 AEDAIR 129
>gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 124 bits (310), Expect = 2e-26
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1
Query: 200 QGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRD 21
+G MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLKIPPRPPG+AFVEFEDPRD
Sbjct: 64 EGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRD 123
Query: 20 AEDAIR 3
AEDAIR
Sbjct: 124 AEDAIR 129
>gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 124 bits (310), Expect = 2e-26
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1
Query: 200 QGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRD 21
+G MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLKIPPRPPG+AFVEFEDPRD
Sbjct: 64 EGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRD 123
Query: 20 AEDAIR 3
AEDAIR
Sbjct: 124 AEDAIR 129
>gb|EMS62218.1| Pre-mRNA-splicing factor SF2 [Triticum urartu]
Length = 361
Score = 123 bits (309), Expect = 2e-26
Identities = 63/84 (75%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Frame = -1
Query: 257 ARKENPGHRW-LKPSRLYPRQGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVD 81
A K NP R P RL ++G MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+D
Sbjct: 59 AAKPNPSLRPPSNPHRL--QRGGMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDID 116
Query: 80 LKIPPRPPGYAFVEFEDPRDAEDA 9
LK+PPRPPGYAFVEFEDPRDAEDA
Sbjct: 117 LKVPPRPPGYAFVEFEDPRDAEDA 140
>ref|XP_006417608.1| hypothetical protein EUTSA_v10008203mg [Eutrema salsugineum]
gi|557095379|gb|ESQ35961.1| hypothetical protein
EUTSA_v10008203mg [Eutrema salsugineum]
Length = 283
Score = 122 bits (306), Expect = 5e-26
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS R++RTIYVGNLPGDIR REVEDLFCKYGTI+D+DLKIPPRPPGYAFVEFEDPRDA+D
Sbjct: 25 MSSRWNRTIYVGNLPGDIRMREVEDLFCKYGTIVDIDLKIPPRPPGYAFVEFEDPRDADD 84
Query: 11 AI 6
AI
Sbjct: 85 AI 86
>ref|XP_006417607.1| hypothetical protein EUTSA_v10008203mg [Eutrema salsugineum]
gi|557095378|gb|ESQ35960.1| hypothetical protein
EUTSA_v10008203mg [Eutrema salsugineum]
Length = 281
Score = 122 bits (306), Expect = 5e-26
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS R++RTIYVGNLPGDIR REVEDLFCKYGTI+D+DLKIPPRPPGYAFVEFEDPRDA+D
Sbjct: 25 MSSRWNRTIYVGNLPGDIRMREVEDLFCKYGTIVDIDLKIPPRPPGYAFVEFEDPRDADD 84
Query: 11 AI 6
AI
Sbjct: 85 AI 86
>ref|XP_006417606.1| hypothetical protein EUTSA_v10008203mg [Eutrema salsugineum]
gi|557095377|gb|ESQ35959.1| hypothetical protein
EUTSA_v10008203mg [Eutrema salsugineum]
Length = 324
Score = 122 bits (306), Expect = 5e-26
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS R++RTIYVGNLPGDIR REVEDLFCKYGTI+D+DLKIPPRPPGYAFVEFEDPRDA+D
Sbjct: 25 MSSRWNRTIYVGNLPGDIRMREVEDLFCKYGTIVDIDLKIPPRPPGYAFVEFEDPRDADD 84
Query: 11 AI 6
AI
Sbjct: 85 AI 86
>ref|XP_004984425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X2 [Setaria
italica]
Length = 295
Score = 122 bits (306), Expect = 5e-26
Identities = 56/64 (87%), Positives = 61/64 (95%)
Frame = -1
Query: 197 GIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDA 18
G MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLK+PPRPPGYAFVEFEDPRDA
Sbjct: 11 GKMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDA 70
Query: 17 EDAI 6
EDAI
Sbjct: 71 EDAI 74
>ref|XP_004984424.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Setaria
italica]
Length = 297
Score = 122 bits (306), Expect = 5e-26
Identities = 56/64 (87%), Positives = 61/64 (95%)
Frame = -1
Query: 197 GIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDA 18
G MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLK+PPRPPGYAFVEFEDPRDA
Sbjct: 11 GKMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDA 70
Query: 17 EDAI 6
EDAI
Sbjct: 71 EDAI 74
>gb|EMT26128.1| Pre-mRNA-splicing factor SF2 [Aegilops tauschii]
Length = 268
Score = 122 bits (305), Expect = 6e-26
Identities = 55/66 (83%), Positives = 63/66 (95%)
Frame = -1
Query: 203 RQGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPR 24
+QG MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+++DLK+PPRPPG+AFVEFEDPR
Sbjct: 40 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPR 99
Query: 23 DAEDAI 6
DAEDAI
Sbjct: 100 DAEDAI 105
>gb|EMS45263.1| Pre-mRNA-splicing factor SF2 [Triticum urartu]
Length = 467
Score = 122 bits (305), Expect = 6e-26
Identities = 55/66 (83%), Positives = 63/66 (95%)
Frame = -1
Query: 203 RQGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPR 24
+QG MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+++DLK+PPRPPG+AFVEFEDPR
Sbjct: 29 KQGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPR 88
Query: 23 DAEDAI 6
DAEDAI
Sbjct: 89 DAEDAI 94
>dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 122 bits (305), Expect = 6e-26
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLKIPPRPPG+AFVEFEDPRDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 11 AIR 3
AIR
Sbjct: 61 AIR 63
>ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa
Japonica Group]
Length = 296
Score = 122 bits (305), Expect = 6e-26
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLKIPPRPPG+AFVEFEDPRDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 11 AIR 3
AIR
Sbjct: 61 AIR 63
>gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 121 bits (303), Expect = 1e-25
Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Frame = -1
Query: 230 WL-KPSRLYPRQGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPG 54
WL KP+ G MS+R SRTIYVGNLPGDIREREVEDLF KYG I+D+DLKIPPRPPG
Sbjct: 14 WLDKPTE----HGTMSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPG 69
Query: 53 YAFVEFEDPRDAEDAI 6
YAFVEFEDPRDA+DAI
Sbjct: 70 YAFVEFEDPRDAQDAI 85
>ref|XP_006305406.1| hypothetical protein CARUB_v10009803mg, partial [Capsella rubella]
gi|565495536|ref|XP_006305407.1| hypothetical protein
CARUB_v10009803mg, partial [Capsella rubella]
gi|482574117|gb|EOA38304.1| hypothetical protein
CARUB_v10009803mg, partial [Capsella rubella]
gi|482574118|gb|EOA38305.1| hypothetical protein
CARUB_v10009803mg, partial [Capsella rubella]
Length = 314
Score = 120 bits (301), Expect = 2e-25
Identities = 59/81 (72%), Positives = 67/81 (82%)
Frame = -1
Query: 248 ENPGHRWLKPSRLYPRQGIMSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIP 69
E + +L+P L P MS R++RTIYVGNLPGDIR REVEDLFCKYG I+D+DLKIP
Sbjct: 11 EQSSYHFLEP--LSPTN--MSSRWNRTIYVGNLPGDIRMREVEDLFCKYGPIVDIDLKIP 66
Query: 68 PRPPGYAFVEFEDPRDAEDAI 6
PRPPGYAFVEFEDPRDA+DAI
Sbjct: 67 PRPPGYAFVEFEDPRDADDAI 87
>ref|XP_006658109.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Oryza
brachyantha]
Length = 288
Score = 120 bits (300), Expect = 2e-25
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLKIPPRPPG+AFVEFEDPRDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 11 AI 6
AI
Sbjct: 61 AI 62
>gb|EMT33521.1| Pre-mRNA-splicing factor SF2 [Aegilops tauschii]
Length = 268
Score = 119 bits (299), Expect = 3e-25
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLK+PPRPPGYAFVEFEDPRDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 11 A 9
A
Sbjct: 61 A 61
>gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 119 bits (299), Expect = 3e-25
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLK+PPRPPGYAFVEFEDPRDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 11 AI 6
AI
Sbjct: 61 AI 62
>ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 119 bits (299), Expect = 3e-25
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLK+PPRPPGYAFVEFEDPRDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 11 A 9
A
Sbjct: 61 A 61
>gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA
splicing factor SRP32 [Zea mays]
Length = 257
Score = 119 bits (299), Expect = 3e-25
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = -1
Query: 191 MSKRYSRTIYVGNLPGDIREREVEDLFCKYGTIIDVDLKIPPRPPGYAFVEFEDPRDAED 12
MS+R+SRTIYVGNLPGDIREREVEDLF KYG I+D+DLK+PPRPPGYAFVEFEDPRDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 11 AI 6
AI
Sbjct: 61 AI 62