BLASTX nr result

ID: Zingiber23_contig00026677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00026677
         (332 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61141.1| hypothetical protein ZEAMMB73_943069, partial [Ze...    60   3e-07

>gb|AFW61141.1| hypothetical protein ZEAMMB73_943069, partial [Zea mays]
          Length = 185

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
 Frame = +2

Query: 2   GPSPVVPFLLVAALTMFICREDLRNGYDYVSGVQDKTVLFLVILP------MIGFFAVQS 163
           GPSPVVP L+VAAL   IC+E L   Y+ V+ VQ+      V+L       ++      +
Sbjct: 18  GPSPVVPLLVVAALGWVICQETLMGWYEQVTEVQETVADNAVLLVLGAGVLLLALAVAGN 77

Query: 164 STEKIVIPIAFCTVVFLLRTQLLGPIVVLVLIHLLSKWYRTP 289
            +E +++P A   V+FL++  +L  +++LV+++    +Y  P
Sbjct: 78  RSEVVLVPAALVLVMFLIQNIVLAALLLLVVVYFAGIYYYRP 119


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