BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00026640
         (409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Popu...   134   1e-29
emb|CBI36976.3| unnamed protein product [Vitis vinifera]              132   5e-29
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor...   132   5e-29
ref|XP_006492368.1| PREDICTED: probable pre-mRNA-splicing factor...   132   6e-29
ref|XP_006444546.1| hypothetical protein CICLE_v10019038mg [Citr...   132   6e-29
gb|EOX95342.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...   129   4e-28
gb|EOX95341.1| RNA helicase family protein isoform 10 [Theobroma...   129   4e-28
gb|EOX95339.1| RNA helicase family protein isoform 8 [Theobroma ...   129   4e-28
gb|EOX95338.1| RNA helicase family protein isoform 7 [Theobroma ...   129   4e-28
gb|EOX95337.1| RNA helicase family protein isoform 6 [Theobroma ...   129   4e-28
gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma ...   129   4e-28
gb|EOX95335.1| RNA helicase family protein isoform 4 [Theobroma ...   129   4e-28
gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...   129   4e-28
gb|EOX95333.1| RNA helicase family protein isoform 2 [Theobroma ...   129   4e-28
gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma ...   129   4e-28
ref|XP_002301528.1| pre-mRNA splicing factor ATP-dependent RNA h...   128   7e-28
gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent R...   128   9e-28
gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlise...   127   1e-27
gb|EMT32166.1| Putative pre-mRNA-splicing factor ATP-dependent R...   126   3e-27
ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu...   125   6e-27

>ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Populus trichocarpa]
           gi|550323982|gb|EEE99278.2| hypothetical protein
           POPTR_0014s11320g [Populus trichocarpa]
          Length = 729

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/90 (73%), Positives = 74/90 (82%)
 Frame = +3

Query: 138 VMSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILE 317
           +M TERKRKVSLFDV+DEASVS KL K NGA ++      + INRWNG+PYSQRYYEILE
Sbjct: 1   MMGTERKRKVSLFDVVDEASVSAKLLKSNGATNNNNNEGSSSINRWNGKPYSQRYYEILE 60

Query: 318 KRKTLPVWQQKEEFLQVLKANQTLILVGET 407
           KRK LPVW QKE+FLQVLK NQ L+LVGET
Sbjct: 61  KRKNLPVWHQKEDFLQVLKKNQVLVLVGET 90


>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  132 bits (332), Expect = 5e-29
 Identities = 66/89 (74%), Positives = 74/89 (83%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE SVS K++K NG+ +         +NRWNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSVSAKISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEILEK 60

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           R+TLPVW QKEEFLQVLKANQ+LILVGET
Sbjct: 61  RRTLPVWHQKEEFLQVLKANQSLILVGET 89


>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
           hypothetical protein VITISV_036050 [Vitis vinifera]
          Length = 728

 Score =  132 bits (332), Expect = 5e-29
 Identities = 66/89 (74%), Positives = 74/89 (83%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE SVS K++K NG+ +         +NRWNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSVSAKISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEILEK 60

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           R+TLPVW QKEEFLQVLKANQ+LILVGET
Sbjct: 61  RRTLPVWHQKEEFLQVLKANQSLILVGET 89


>ref|XP_006492368.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Citrus sinensis]
          Length = 727

 Score =  132 bits (331), Expect = 6e-29
 Identities = 69/93 (74%), Positives = 74/93 (79%), Gaps = 4/93 (4%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTG----INRWNGRPYSQRYYE 308
           M TERKRKVSLFDV+DE SVS KL K NG     P A+       INRWNG+PYSQRYYE
Sbjct: 1   MGTERKRKVSLFDVVDETSVSAKLVKTNGV---GPGAMMNNNNSLINRWNGKPYSQRYYE 57

Query: 309 ILEKRKTLPVWQQKEEFLQVLKANQTLILVGET 407
           ILEKRK+LPVWQQKEEFLQVLKANQ +ILVGET
Sbjct: 58  ILEKRKSLPVWQQKEEFLQVLKANQVIILVGET 90


>ref|XP_006444546.1| hypothetical protein CICLE_v10019038mg [Citrus clementina]
           gi|557546808|gb|ESR57786.1| hypothetical protein
           CICLE_v10019038mg [Citrus clementina]
          Length = 727

 Score =  132 bits (331), Expect = 6e-29
 Identities = 69/93 (74%), Positives = 74/93 (79%), Gaps = 4/93 (4%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTG----INRWNGRPYSQRYYE 308
           M TERKRKVSLFDV+DE SVS KL K NG     P A+       INRWNG+PYSQRYYE
Sbjct: 1   MGTERKRKVSLFDVVDETSVSAKLVKTNGV---GPGAMMNNNNSLINRWNGKPYSQRYYE 57

Query: 309 ILEKRKTLPVWQQKEEFLQVLKANQTLILVGET 407
           ILEKRK+LPVWQQKEEFLQVLKANQ +ILVGET
Sbjct: 58  ILEKRKSLPVWQQKEEFLQVLKANQVIILVGET 90


>gb|EOX95342.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 11
           [Theobroma cacao]
          Length = 557

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95341.1| RNA helicase family protein isoform 10 [Theobroma cacao]
          Length = 538

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95339.1| RNA helicase family protein isoform 8 [Theobroma cacao]
          Length = 544

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95338.1| RNA helicase family protein isoform 7 [Theobroma cacao]
          Length = 572

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95337.1| RNA helicase family protein isoform 6 [Theobroma cacao]
          Length = 545

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma cacao]
          Length = 683

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95335.1| RNA helicase family protein isoform 4 [Theobroma cacao]
           gi|508703444|gb|EOX95340.1| RNA helicase family protein
           isoform 4 [Theobroma cacao]
          Length = 546

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 3
           [Theobroma cacao]
          Length = 746

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95333.1| RNA helicase family protein isoform 2 [Theobroma cacao]
          Length = 555

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma cacao]
          Length = 725

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/89 (76%), Positives = 73/89 (82%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S   K++K NG        V + IN+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSA--KISKSNGG-GIAAMNVNSSINKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVWQQKEEFLQVLKANQTLILVGET
Sbjct: 58  RKTLPVWQQKEEFLQVLKANQTLILVGET 86


>ref|XP_002301528.1| pre-mRNA splicing factor ATP-dependent RNA helicase family protein
           [Populus trichocarpa] gi|222843254|gb|EEE80801.1|
           pre-mRNA splicing factor ATP-dependent RNA helicase
           family protein [Populus trichocarpa]
          Length = 728

 Score =  128 bits (322), Expect = 7e-28
 Identities = 62/89 (69%), Positives = 71/89 (79%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE S+S K+ K NGA  +      + INRWNG+PYSQRYY+ILEK
Sbjct: 1   MGTERKRKVSLFDVVDETSLSAKIVKSNGAMGNNNNGGSSLINRWNGKPYSQRYYDILEK 60

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RK LPVW QKE+FLQVLK NQ +ILVGET
Sbjct: 61  RKNLPVWHQKEDFLQVLKKNQAIILVGET 89


>gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
           notabilis]
          Length = 922

 Score =  128 bits (321), Expect = 9e-28
 Identities = 64/90 (71%), Positives = 74/90 (82%)
 Frame = +3

Query: 138 VMSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILE 317
           +M TERKRKVSLFDV+DE SVS K+A  NGA    P A  + +N W G+PYSQRY+EILE
Sbjct: 196 LMGTERKRKVSLFDVVDETSVSAKIANTNGA--GGPMAGNSLVNTWTGKPYSQRYFEILE 253

Query: 318 KRKTLPVWQQKEEFLQVLKANQTLILVGET 407
           KRKTLPVWQQK+EF+QVL+ NQTLILVGET
Sbjct: 254 KRKTLPVWQQKDEFMQVLRNNQTLILVGET 283


>gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlisea aurea]
          Length = 720

 Score =  127 bits (320), Expect = 1e-27
 Identities = 64/89 (71%), Positives = 76/89 (85%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNGAFSSRPAAVPTGINRWNGRPYSQRYYEILEK 320
           M TERKRKVSLFDV+DE + S K+ + NGA ++  AA+P+ +N+WNGRPYSQRYYEILEK
Sbjct: 1   MGTERKRKVSLFDVVDETA-SGKILRSNGAAAA--AALPSTVNKWNGRPYSQRYYEILEK 57

Query: 321 RKTLPVWQQKEEFLQVLKANQTLILVGET 407
           RKTLPVW QK+EFLQ L+ NQTLILVGET
Sbjct: 58  RKTLPVWHQKQEFLQALRENQTLILVGET 86


>gb|EMT32166.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
           [Aegilops tauschii]
          Length = 697

 Score =  126 bits (316), Expect = 3e-27
 Identities = 66/91 (72%), Positives = 75/91 (82%), Gaps = 2/91 (2%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAK--VNGAFSSRPAAVPTGINRWNGRPYSQRYYEIL 314
           M TERKRKVSLFDV+DE SVS KL +  +NGA ++  AA    INRWNGRPYS RY EIL
Sbjct: 1   MGTERKRKVSLFDVVDETSVSAKLGRAGINGAAAA--AAANPSINRWNGRPYSARYLEIL 58

Query: 315 EKRKTLPVWQQKEEFLQVLKANQTLILVGET 407
           EKR+TLPVWQQK+EFL+VL+ NQTLILVGET
Sbjct: 59  EKRRTLPVWQQKDEFLRVLRDNQTLILVGET 89


>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 731

 Score =  125 bits (314), Expect = 6e-27
 Identities = 65/92 (70%), Positives = 72/92 (78%), Gaps = 3/92 (3%)
 Frame = +3

Query: 141 MSTERKRKVSLFDVMDEASVSEKLAKVNG---AFSSRPAAVPTGINRWNGRPYSQRYYEI 311
           M T+RKRKVSLFDV+DE SVS K+AK NG   A  +   +  + IN WNG+PYSQRYYEI
Sbjct: 1   MGTDRKRKVSLFDVVDETSVSAKIAKSNGGGGAAMNNNGSSNSLINSWNGKPYSQRYYEI 60

Query: 312 LEKRKTLPVWQQKEEFLQVLKANQTLILVGET 407
           LEKRKTLPVW QKEEFL VLK NQ LILVGET
Sbjct: 61  LEKRKTLPVWHQKEEFLSVLKKNQVLILVGET 92