BLASTX nr result
ID: Zingiber23_contig00026630
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00026630
(203 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|4JVS|B Chain B, Crystal Structure Of Lepb Gap Domain From Le... 66 4e-09
gb|ESN96834.1| hypothetical protein HELRODRAFT_185942 [Helobdell... 65 1e-08
ref|XP_004533560.1| PREDICTED: ras-related protein Rab-1A-like [... 65 1e-08
gb|EMJ20000.1| hypothetical protein PRUPE_ppa009820mg [Prunus pe... 64 2e-08
ref|XP_006240866.1| PREDICTED: LOW QUALITY PROTEIN: ras-related ... 64 3e-08
emb|CDJ86514.1| Ras domain containing protein [Haemonchus contor... 64 3e-08
ref|XP_005489445.1| PREDICTED: ras-related protein Rab-1A isofor... 64 3e-08
ref|XP_005366508.1| PREDICTED: ras-related protein Rab-1A isofor... 64 3e-08
ref|XP_005366507.1| PREDICTED: ras-related protein Rab-1A isofor... 64 3e-08
ref|XP_005147502.1| PREDICTED: ras-related protein Rab-1A isofor... 64 3e-08
ref|XP_005147501.1| PREDICTED: ras-related protein Rab-1A isofor... 64 3e-08
ref|XP_005070453.1| PREDICTED: ras-related protein Rab-1A isofor... 64 3e-08
ref|XP_005070452.1| PREDICTED: ras-related protein Rab-1A isofor... 64 3e-08
gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos mutus] 64 3e-08
ref|XP_002709884.1| PREDICTED: RAB1A, member RAS oncogene family... 64 3e-08
gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic cons... 64 3e-08
gb|AAB16966.1| rab1-like, partial [Caenorhabditis elegans] 64 3e-08
gb|AAA42006.1| ras protein [Rattus norvegicus] 64 3e-08
ref|NP_001028800.1| ras-related protein Rab-1A [Bos taurus] gi|4... 64 3e-08
ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (... 64 3e-08
>pdb|4JVS|B Chain B, Crystal Structure Of Lepb Gap Domain From Legionella
Drancourtii In Complex With Rab1-gdp And Alf3
Length = 181
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -1
Query: 98 PVSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
P+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 4 PMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 35
>gb|ESN96834.1| hypothetical protein HELRODRAFT_185942 [Helobdella robusta]
Length = 204
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+SAMNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_004533560.1| PREDICTED: ras-related protein Rab-1A-like [Ceratitis capitata]
Length = 205
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+SAMNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>gb|EMJ20000.1| hypothetical protein PRUPE_ppa009820mg [Prunus persica]
Length = 276
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = -1
Query: 101 LPVSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
L V+ MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 70 LAVTVMNPEYDYLFKLLLIGDSGVGKSCLLLRF 102
>ref|XP_006240866.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-1A-like
[Rattus norvegicus]
Length = 208
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>emb|CDJ86514.1| Ras domain containing protein [Haemonchus contortus]
Length = 205
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
++AMNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_005489445.1| PREDICTED: ras-related protein Rab-1A isoform X2 [Zonotrichia
albicollis] gi|543364200|ref|XP_005525464.1| PREDICTED:
ras-related protein Rab-1A isoform X2 [Pseudopodoces
humilis]
Length = 129
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_005366508.1| PREDICTED: ras-related protein Rab-1A isoform X2 [Microtus
ochrogaster]
Length = 129
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_005366507.1| PREDICTED: ras-related protein Rab-1A isoform X1 [Microtus
ochrogaster]
Length = 205
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_005147502.1| PREDICTED: ras-related protein Rab-1A isoform X2 [Melopsittacus
undulatus]
Length = 129
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_005147501.1| PREDICTED: ras-related protein Rab-1A isoform X1 [Melopsittacus
undulatus]
Length = 205
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_005070453.1| PREDICTED: ras-related protein Rab-1A isoform X2 [Mesocricetus
auratus]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|XP_005070452.1| PREDICTED: ras-related protein Rab-1A isoform X1 [Mesocricetus
auratus]
Length = 205
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos mutus]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 42 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 72
>ref|XP_002709884.1| PREDICTED: RAB1A, member RAS oncogene family isoform 2
[Oryctolagus cuniculus]
gi|332813298|ref|XP_003309085.1| PREDICTED: ras-related
protein Rab-1A isoform 1 [Pan troglodytes]
gi|395731757|ref|XP_003775962.1| PREDICTED: ras-related
protein Rab-1A [Pongo abelii]
gi|397521757|ref|XP_003830954.1| PREDICTED: ras-related
protein Rab-1A [Pan paniscus]
gi|472355791|ref|XP_004397542.1| PREDICTED: ras-related
protein Rab-1A isoform 3 [Odobenus rosmarus divergens]
gi|504135342|ref|XP_004580148.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Ochotona princeps]
gi|505804410|ref|XP_004609232.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Sorex araneus]
gi|507664186|ref|XP_004636207.1| PREDICTED: ras-related
protein Rab-1A isoform X3 [Octodon degus]
gi|507679341|ref|XP_004710231.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Echinops telfairi]
gi|507973768|ref|XP_004691513.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Condylura cristata]
gi|530367912|ref|XP_005264525.1| PREDICTED: ras-related
protein Rab-1A isoform X1 [Homo sapiens]
gi|544480970|ref|XP_005575792.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Macaca fascicularis]
gi|545186550|ref|XP_005599987.1| PREDICTED: ras-related
protein Rab-1A isoform X3 [Equus caballus]
gi|555963065|ref|XP_005893619.1| PREDICTED: ras-related
protein Rab-1A isoform X3 [Bos mutus]
gi|560958228|ref|XP_006201577.1| PREDICTED: ras-related
protein Rab-1A isoform X3 [Vicugna pacos]
gi|585194591|ref|XP_006748471.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Leptonychotes weddellii]
gi|585641635|ref|XP_006881027.1| PREDICTED: ras-related
protein Rab-1A isoform X1 [Elephantulus edwardii]
gi|586464780|ref|XP_006863017.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Chrysochloris asiatica]
gi|221044672|dbj|BAH14013.1| unnamed protein product
[Homo sapiens]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene
family [synthetic construct]
Length = 206
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>gb|AAB16966.1| rab1-like, partial [Caenorhabditis elegans]
Length = 69
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
++AMNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|NP_001028800.1| ras-related protein Rab-1A [Bos taurus]
gi|466062556|ref|XP_004280671.1| PREDICTED: ras-related
protein Rab-1A isoform 2 [Orcinus orca]
gi|472355789|ref|XP_004397541.1| PREDICTED: ras-related
protein Rab-1A isoform 2 [Odobenus rosmarus divergens]
gi|555963063|ref|XP_005893618.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Bos mutus]
gi|560958226|ref|XP_006201576.1| PREDICTED: ras-related
protein Rab-1A isoform X2 [Vicugna pacos]
gi|73586795|gb|AAI03437.1| RAB1A, member RAS oncogene
family [Bos taurus] gi|148675883|gb|EDL07830.1| RAB1,
member RAS oncogene family, isoform CRA_b [Mus
musculus] gi|149044749|gb|EDL97935.1| rCG23301, isoform
CRA_c [Rattus norvegicus] gi|296482422|tpg|DAA24537.1|
TPA: GTP binding protein Rab1a [Bos taurus]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31
>ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS
oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus
laevis] gi|49250530|gb|AAH74522.1| RAB1A, member RAS
oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene
family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -1
Query: 95 VSAMNPEYDYLFKLLLIGDSGVGKSCLLLRF 3
+S+MNPEYDYLFKLLLIGDSGVGKSCLLLRF
Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRF 31