BLASTX nr result
ID: Zingiber23_contig00026552
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00026552
(1221 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 434 e-119
ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 429 e-117
ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 427 e-117
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 423 e-116
ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 421 e-115
dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare] 421 e-115
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 421 e-115
ref|NP_001147746.1| ATP binding protein [Zea mays] gi|195613438|... 417 e-114
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 416 e-113
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 416 e-113
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 414 e-113
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 411 e-112
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr... 411 e-112
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ... 409 e-111
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 409 e-111
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 406 e-111
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ... 405 e-110
gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrola... 404 e-110
ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 403 e-110
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 402 e-109
>sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 58, chloroplastic;
Flags: Precursor
Length = 438
Score = 434 bits (1116), Expect = e-119
Identities = 216/314 (68%), Positives = 254/314 (80%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR++C G+VPEH+LQRAEE+GY PT VQ SLP+LLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 39 TLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 98
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 638
VFSAIDF RSSVQAL+VVP+RELG+QVTKV R+L AK CTVMALLDGGML+R
Sbjct: 99 VFSAIDFGRSSVQALVVVPTRELGMQVTKVARILAAK--------ACTVMALLDGGMLRR 150
Query: 639 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 818
KSW+KAEPP I+VATV SLCQMIEK L++MR+LVIDEVDF+F SSKQV LRK+L
Sbjct: 151 QKSWVKAEPPAIIVATVASLCQMIEKRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILT 210
Query: 819 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICK 998
YS +RQT+ ASASIPQHNRF+HDCVQ KWTK DVVHVHVNPV+PMPS L HK+ IC
Sbjct: 211 SYSAASSRQTIFASASIPQHNRFVHDCVQHKWTKTDVVHVHVNPVQPMPSHLQHKYAICS 270
Query: 999 KKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXX 1178
KKERL +L LL+ D+PKSGIIFV+EQSEKSK+ GHPP TT+V++FL+T+Y G
Sbjct: 271 KKERLHVLLSLLEKDAPKSGIIFVAEQSEKSKKAGHPPSTTVVVEFLRTTYMGSLEVLLL 330
Query: 1179 XXXXXXNARASSFS 1220
NARA+SF+
Sbjct: 331 EEDMNFNARATSFT 344
>ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Setaria italica]
Length = 456
Score = 429 bits (1103), Expect = e-117
Identities = 215/314 (68%), Positives = 254/314 (80%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR++C G+VP+H+LQRAEE+GY PT VQ SLPLLLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 56 TLREVCAGRVPDHVLQRAEEVGYVVPTEVQEQSLPLLLSGQDCILHAQTGSGKTLAYLLS 115
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 638
VFSAIDF RSSVQAL+VVP+RELGIQVTKV R+L AK CTVMALLDGGMLKR
Sbjct: 116 VFSAIDFRRSSVQALVVVPTRELGIQVTKVARLLAAK--------ACTVMALLDGGMLKR 167
Query: 639 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 818
KSW+KAEPP I+VATV SLCQM+E+ L++MR+LVIDEVDF+F SSKQV LRK+L
Sbjct: 168 QKSWVKAEPPAIIVATVPSLCQMVERRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILT 227
Query: 819 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICK 998
YS +RQT+ ASASIPQHNRFLHDCVQ KWTK+DVVHVHVNPV+PMPS L HK+VIC
Sbjct: 228 SYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKSDVVHVHVNPVQPMPSHLCHKYVICT 287
Query: 999 KKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXX 1178
KKERL +L LL+ D+PKS IIFV+EQSE+SK+ G+PP T +V++FL+ SY+G
Sbjct: 288 KKERLHVLLSLLERDAPKSAIIFVAEQSERSKKAGNPPSTAVVIEFLRNSYKGSLDVLLL 347
Query: 1179 XXXXXXNARASSFS 1220
NARA+SFS
Sbjct: 348 EEDMNFNARAASFS 361
>ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Oryza brachyantha]
Length = 448
Score = 427 bits (1097), Expect = e-117
Identities = 213/314 (67%), Positives = 254/314 (80%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR++C G+VPEH++QRAEE+GY PT VQ SLP+LLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 49 TLREVCAGRVPEHVIQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 108
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 638
VFSAIDF RSSVQAL+VVP+RELG+QVTKV RVL AK CTVMALLDGGML+R
Sbjct: 109 VFSAIDFGRSSVQALVVVPTRELGMQVTKVARVLAAK--------ACTVMALLDGGMLRR 160
Query: 639 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 818
KSW+KA+PP IVVATV SLCQM+EK L++M++LVIDEVDF+F SSKQV LRK+L
Sbjct: 161 QKSWVKADPPAIVVATVASLCQMLEKRAFSLQSMKVLVIDEVDFIFGSSKQVSSLRKILT 220
Query: 819 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICK 998
YS +RQT+ ASASIPQHNRFLHDCVQ KWTK+DVVHVHVNPV+PMPS L H++ IC
Sbjct: 221 SYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKSDVVHVHVNPVQPMPSHLCHRYAICS 280
Query: 999 KKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXX 1178
KKERL IL LL+ D+PKSGIIFV+EQSE+SK+ GHPP TT+V++FL+++Y G
Sbjct: 281 KKERLHILLSLLEKDAPKSGIIFVAEQSERSKKAGHPPSTTVVVEFLRSTYMGSLEVLLL 340
Query: 1179 XXXXXXNARASSFS 1220
NARA SF+
Sbjct: 341 EEDMNFNARAISFT 354
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Vitis vinifera]
Length = 482
Score = 423 bits (1087), Expect = e-116
Identities = 220/352 (62%), Positives = 266/352 (75%), Gaps = 1/352 (0%)
Frame = +3
Query: 168 FPCRLFSLSSGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPEHILQRAEEIGY 347
F R+ + + A P+ A ++ + D T TLR++C+G VPEH+L+R EE+G+
Sbjct: 42 FTRRVSNSNCNAKPAQA--TLNSSSITEASDIGERTLTLREICQGCVPEHVLRRIEEVGF 99
Query: 348 TQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVPSREL 527
PT+VQ +LP+LLSGRDC+LHAQTGSGKTL YLL +FS ++ S+VQALIVVP+REL
Sbjct: 100 IVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTREL 159
Query: 528 GIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLKRHKSWLKAEPPQIVVATVGSLCQ 704
GIQVTKV R+L AKP+ E+ +CTVMALLDGGMLKRHKSWLKAEPP IVVATV SLCQ
Sbjct: 160 GIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQ 219
Query: 705 MIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIPQHNR 884
M+EK I KLE+MR+LVIDEVDFMF++SKQV LRKLL YS+ + RQTV ASASIPQH R
Sbjct: 220 MLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRR 279
Query: 885 FLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICKKKERLFILQYLLKCDSPKSGII 1064
FLHDC+QQKWTK+DVVHVHVNP+EPMPS LHH+FVIC K ER L LL D+P+ GII
Sbjct: 280 FLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGII 339
Query: 1065 FVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXXXXXXXXNARASSFS 1220
FV EQSEKSK+ G+ P TL++DFL+TSY G N RA+S S
Sbjct: 340 FVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLS 391
>ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Brachypodium distachyon]
Length = 446
Score = 421 bits (1083), Expect = e-115
Identities = 211/342 (61%), Positives = 261/342 (76%)
Frame = +3
Query: 195 SGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCL 374
S + S + ++ +RS P TLR++C G+VP+H+LQRAE++GY PT VQ
Sbjct: 19 STRISSPSYTPLAASTSRSGLRPLRAAATLREVCAGRVPDHVLQRAEDVGYVVPTEVQEQ 78
Query: 375 SLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVR 554
SLP+LLSG+DC+LHAQTGSGKTLAYLL+VFSAID RSSVQAL++VP+RELGIQVTKV R
Sbjct: 79 SLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAIDVRRSSVQALVIVPTRELGIQVTKVAR 138
Query: 555 VLTAKPVGFEMIHTCTVMALLDGGMLKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLE 734
VL AK CTVMALLDGGML R KSW+KAEPP I+VATV SLCQM+EK L
Sbjct: 139 VLAAK--------ACTVMALLDGGMLTRQKSWVKAEPPAIIVATVASLCQMVEKRAFSLG 190
Query: 735 AMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKW 914
+++ILVIDEVDF+F SSKQV +RK+L Y+ RQT+ ASASIPQHNRF+HDC+Q KW
Sbjct: 191 SIKILVIDEVDFIFGSSKQVNSVRKILTSYTAASGRQTIFASASIPQHNRFVHDCIQHKW 250
Query: 915 TKNDVVHVHVNPVEPMPSQLHHKFVICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSK 1094
TK++VVHVHVNPV+PMPSQLHHK+ IC KKERL +L LL+ D+PKS IIFV++QSEKSK
Sbjct: 251 TKSNVVHVHVNPVQPMPSQLHHKYAICMKKERLHVLLSLLERDAPKSAIIFVAQQSEKSK 310
Query: 1095 RLGHPPPTTLVLDFLQTSYEGXXXXXXXXXXXXXNARASSFS 1220
R G+PP + LV++F++T+Y G NARA+SF+
Sbjct: 311 RAGNPPSSILVVEFMRTAYNGSLEVLLLEENMNFNARATSFT 352
>dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 448
Score = 421 bits (1082), Expect = e-115
Identities = 209/314 (66%), Positives = 252/314 (80%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR++C G+VP+H+LQRAE++GY PT VQ SLP+LLSG+DC+LHAQTGSGKTLAYLLA
Sbjct: 49 TLREVCSGRVPDHVLQRAEDVGYVSPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLA 108
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 638
VF+AID RSSVQAL++VP+RELGIQVTKV R+L AK TC VMALLDGGML R
Sbjct: 109 VFAAIDVGRSSVQALVIVPTRELGIQVTKVARLLAAK--------TCNVMALLDGGMLTR 160
Query: 639 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 818
KSWLKAEPP I+VATV SLCQM+EK L +++ILVIDEVDF+F S+KQV LRK+L
Sbjct: 161 QKSWLKAEPPAIIVATVASLCQMVEKRAFSLGSIKILVIDEVDFIFGSTKQVNSLRKILN 220
Query: 819 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICK 998
Y+ +RQT+ ASASIPQHNRF+HDCVQ KWTK+DVVHVHVNPV+PMPS LHH +VIC
Sbjct: 221 SYTAASSRQTIFASASIPQHNRFVHDCVQHKWTKSDVVHVHVNPVQPMPSHLHHTYVICS 280
Query: 999 KKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXX 1178
KKERL +L LL+ D+PKS IIFV++QSEKSKR G+PP +TLV++FL+T Y+G
Sbjct: 281 KKERLHVLLSLLERDAPKSVIIFVAQQSEKSKRAGNPPSSTLVVEFLRTEYKGTLEVLVL 340
Query: 1179 XXXXXXNARASSFS 1220
NARA+SF+
Sbjct: 341 EEDMNFNARATSFT 354
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 421 bits (1081), Expect = e-115
Identities = 212/318 (66%), Positives = 256/318 (80%), Gaps = 1/318 (0%)
Frame = +3
Query: 270 ETPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAY 449
E TLR++C G+VPEH+L+R EE+GY PT+VQ +LP+L SGRDC+LHAQTGSGKTLAY
Sbjct: 73 EALTLREICLGRVPEHLLRRVEEVGYAVPTDVQKQALPVLFSGRDCILHAQTGSGKTLAY 132
Query: 450 LLAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGG 626
LL +FS I+ RS+VQALIVVP+RELGIQVTKV R+L A P + +CTVMALLDGG
Sbjct: 133 LLLIFSVINTQRSAVQALIVVPTRELGIQVTKVARMLAATPTENDAEQKSCTVMALLDGG 192
Query: 627 MLKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLR 806
ML+RHKSWLKAEPP IVVAT+ SLCQM+EK++LKLE+M++LVIDEVDFMF+SSKQV LR
Sbjct: 193 MLRRHKSWLKAEPPTIVVATIASLCQMLEKHLLKLESMQVLVIDEVDFMFNSSKQVSSLR 252
Query: 807 KLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKF 986
KLL YS+ ++RQTV ASASIPQHNRFL+DC+QQKWTK DVVHVHVNP+EPMP+ L H+F
Sbjct: 253 KLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVHVNPIEPMPTCLQHRF 312
Query: 987 VICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXX 1166
VIC KK+R L LL+ D+PKSGIIFV EQSEKSK+ G+ PPT ++DFL+TSY
Sbjct: 313 VICSKKQRHQTLLSLLQSDAPKSGIIFVGEQSEKSKKAGNGPPTIDLVDFLKTSYGDCSE 372
Query: 1167 XXXXXXXXXXNARASSFS 1220
N+RA+S S
Sbjct: 373 ILLLEEDMNFNSRAASLS 390
>ref|NP_001147746.1| ATP binding protein [Zea mays] gi|195613438|gb|ACG28549.1| ATP
binding protein [Zea mays]
Length = 447
Score = 417 bits (1071), Expect = e-114
Identities = 208/314 (66%), Positives = 249/314 (79%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR++C G+VP+H+LQRAEEIGY PT +Q SLPLLLSG+DC+LHAQTGSGKTLAYLL+
Sbjct: 46 TLREVCSGRVPDHVLQRAEEIGYVVPTEMQEQSLPLLLSGQDCILHAQTGSGKTLAYLLS 105
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 638
+FS IDF+RSSVQAL+VVP+RELG+QVTKV R+L AK CTVMALLDGG LKR
Sbjct: 106 IFSTIDFSRSSVQALVVVPTRELGMQVTKVARLLAAK--------ACTVMALLDGGTLKR 157
Query: 639 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 818
KSW+KAEPP I+VATV SLCQM+E+ L++MR+LVIDEVDF+F SSKQV LRK+L
Sbjct: 158 QKSWVKAEPPAIIVATVASLCQMVERRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILT 217
Query: 819 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICK 998
YS +RQT+ ASASIPQHNRFLHDCVQ KWTK DVVHVHV+PV+PMPS L HK+VIC
Sbjct: 218 SYSAASSRQTIFASASIPQHNRFLHDCVQHKWTKGDVVHVHVHPVQPMPSHLCHKYVICT 277
Query: 999 KKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXX 1178
KKER+ +L LL+ D+PKS IIFV+ QSE+SK+ G+PP T +V DFL+ Y+G
Sbjct: 278 KKERMHVLLSLLERDAPKSAIIFVAGQSERSKKAGNPPSTMVVSDFLRNEYKGSLDVMLL 337
Query: 1179 XXXXXXNARASSFS 1220
NARA+SFS
Sbjct: 338 EEDMNFNARAASFS 351
>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 476
Score = 416 bits (1068), Expect = e-113
Identities = 206/314 (65%), Positives = 251/314 (79%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR+LC+ VPE +L R EEIGY PT+VQ +LP+L SG+DC+LH QTGSGKTLAYLL
Sbjct: 82 TLRELCQNYVPEPVLHRMEEIGYVMPTDVQRQALPVLFSGQDCILHGQTGSGKTLAYLLL 141
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHTCTVMALLDGGMLKR 638
++S I+ RS+VQALI+VP+RELG+QVTKV R+L AKP+ TVMALLDGGML+R
Sbjct: 142 IYSVINAQRSAVQALIIVPTRELGMQVTKVARMLAAKPMDV------TVMALLDGGMLRR 195
Query: 639 HKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLG 818
HKSWLKAEPP+IVVAT+ SLCQM+EK+I KL++M++LVIDEVDFMF+SSKQV LRKLL
Sbjct: 196 HKSWLKAEPPKIVVATIASLCQMLEKHIFKLDSMQVLVIDEVDFMFNSSKQVSSLRKLLT 255
Query: 819 LYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICK 998
YS+ ++RQTV ASASIPQH RFL+DC+QQKWTK+D VHVH+NPV+PMPS L H+FVIC
Sbjct: 256 SYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKSDAVHVHINPVQPMPSCLQHRFVICS 315
Query: 999 KKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXX 1178
K +R IL LL+CD+PKSGI+FV EQSEKSK+ GH PPTTL++DFL+TSY
Sbjct: 316 KNQRHQILLSLLQCDAPKSGIVFVGEQSEKSKKAGHAPPTTLLVDFLETSYSDCSDILLL 375
Query: 1179 XXXXXXNARASSFS 1220
N RA+S S
Sbjct: 376 EEDMNFNLRAASLS 389
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 416 bits (1068), Expect = e-113
Identities = 219/356 (61%), Positives = 265/356 (74%), Gaps = 5/356 (1%)
Frame = +3
Query: 168 FPCRLFSLSSGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPEHILQ----RAE 335
F R+ + + A P+ A ++ + D T TLR++C+G VPEH++ R E
Sbjct: 42 FTRRVSNSNCNAKPAQA--TLNSSSITEASDIGERTLTLREICQGCVPEHVIALICFRIE 99
Query: 336 EIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVP 515
E+G+ PT+VQ +LP+LLSGRDC+LHAQTGSGKTL YLL +FS ++ S+VQALIVVP
Sbjct: 100 EVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVP 159
Query: 516 SRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLKRHKSWLKAEPPQIVVATVG 692
+RELGIQVTKV R+L AKP+ E+ +CTVMALLDGGMLKRHKSWLKAEPP IVVATV
Sbjct: 160 TRELGIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVR 219
Query: 693 SLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIP 872
SLCQM+EK I KLE+MR+LVIDEVDFMF++SKQV LRKLL YS+ + RQTV ASASIP
Sbjct: 220 SLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIP 279
Query: 873 QHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVICKKKERLFILQYLLKCDSPK 1052
QH RFLHDC+QQKWTK+DVVHVHVNP+EPMPS LHH+FVIC K ER L LL D+P+
Sbjct: 280 QHRRFLHDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPE 339
Query: 1053 SGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXXXXXXXXXNARASSFS 1220
GIIFV EQSEKSK+ G+ P TL++DFL+TSY G N RA+S S
Sbjct: 340 CGIIFVGEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLS 395
>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gi|11385590|gb|AAG34876.1|AF261021_1 putative chloroplast
RNA helicase VDL isoform 1 [Nicotiana tabacum]
Length = 466
Score = 414 bits (1063), Expect = e-113
Identities = 209/317 (65%), Positives = 249/317 (78%), Gaps = 1/317 (0%)
Frame = +3
Query: 273 TPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 452
T TLR+LC G VPEH+++R EE+GY PT VQ +LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 63 TATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYL 122
Query: 453 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 629
L + S ID RS+VQALIVVP+RELG+QVTKV R+L AKP E +CTVMALLDGGM
Sbjct: 123 LQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSCTVMALLDGGM 182
Query: 630 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 809
L RHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL++ ++LV+DEVDFMF+SSK++ L++
Sbjct: 183 LNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKR 242
Query: 810 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 989
LL YST RQT+ ASASIPQH RFL+DCVQQKWTK DVVHVHVN VEPMPS LHH+FV
Sbjct: 243 LLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFV 302
Query: 990 ICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXX 1169
+C K+E+ +L LL+ DSP+S IIFVSEQSEKSK+ G+ PP TL++DFL +S G
Sbjct: 303 VCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVDFLMSSSGGFSNV 362
Query: 1170 XXXXXXXXXNARASSFS 1220
N RA+S S
Sbjct: 363 SLLEEDMNFNKRAASLS 379
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 411 bits (1056), Expect = e-112
Identities = 207/315 (65%), Positives = 249/315 (79%), Gaps = 1/315 (0%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR LC G VPEH++ EE+GY +PT+VQ +LP+L SGRDCVLHAQTGSGKTL YLL
Sbjct: 66 TLRRLCEGLVPEHVV---EEVGYIEPTDVQRQALPILFSGRDCVLHAQTGSGKTLTYLLL 122
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLK 635
+FS ++ RS+VQALIVVP+RELG+QVTKV R L AKP+ ++ +C+VMALLDGG L+
Sbjct: 123 IFSVVNTQRSAVQALIVVPTRELGMQVTKVARTLAAKPMESDLEQKSCSVMALLDGGTLR 182
Query: 636 RHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLL 815
RHKSWLKAEPP +VVAT+GSLCQ ++K IL LE+MR+LVIDEVDF+F+SSKQV LRKLL
Sbjct: 183 RHKSWLKAEPPTVVVATIGSLCQQLDKQILTLESMRVLVIDEVDFIFNSSKQVSSLRKLL 242
Query: 816 GLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 995
YSTI RQTV ASASIPQH RFLH+CVQQKWTK++VVHVHVNP+EPMPS LHH FVIC
Sbjct: 243 TSYSTISNRQTVFASASIPQHRRFLHECVQQKWTKSNVVHVHVNPIEPMPSCLHHNFVIC 302
Query: 996 KKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXX 1175
K +RL L LL D+P SGIIFV EQSEKSK+ G+ PPTT+++DFL+ SY+G
Sbjct: 303 GKNKRLQTLLSLLHSDAPHSGIIFVGEQSEKSKKAGNAPPTTILMDFLKDSYKGGSEILL 362
Query: 1176 XXXXXXXNARASSFS 1220
N+R +S S
Sbjct: 363 LEEDMNINSRTASLS 377
>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
gi|557521726|gb|ESR33093.1| hypothetical protein
CICLE_v10004897mg [Citrus clementina]
Length = 473
Score = 411 bits (1056), Expect = e-112
Identities = 211/343 (61%), Positives = 263/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 189 LSSGAVPSNALPAISCGGARSSRDPYLETPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQ 368
LSS AV + L A G +S TLR+LC+G VPEH+L+R +E GY PT++Q
Sbjct: 48 LSSSAVSTEELAA---GTGNNSL-------TLRELCQGHVPEHVLRRMDETGYVLPTDIQ 97
Query: 369 CLSLPLLLSGRDCVLHAQTGSGKTLAYLLAVFSAIDFTRSSVQALIVVPSRELGIQVTKV 548
+LP+L S RDC+LHAQTGSGKTL YLL +FS ++ RS+VQA+IVVP+RELG+QVTKV
Sbjct: 98 REALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKV 157
Query: 549 VRVLTAKPVGFEMIHT-CTVMALLDGGMLKRHKSWLKAEPPQIVVATVGSLCQMIEKNIL 725
RVL AKP ++ H CTVMALLDGGML+RHKSWLKAEPP IVVAT+GSLCQ+IEK+I
Sbjct: 158 ARVLAAKPSDTDLEHKPCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIF 217
Query: 726 KLEAMRILVIDEVDFMFHSSKQVYPLRKLLGLYSTIDTRQTVLASASIPQHNRFLHDCVQ 905
KLE++++LVIDEVDF+F+SSKQV L+KLL YS+ + RQTV ASASIPQH RFLHDC+Q
Sbjct: 218 KLESVQVLVIDEVDFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHDCIQ 277
Query: 906 QKWTKNDVVHVHVNPVEPMPSQLHHKFVICKKKERLFILQYLLKCDSPKSGIIFVSEQSE 1085
QKWTK+DVVHVHVN ++P+PS LHH+FVIC KK + L L++ D+P+SGIIFV EQSE
Sbjct: 278 QKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSE 337
Query: 1086 KSKRLGHPPPTTLVLDFLQTSYEGXXXXXXXXXXXXXNARASS 1214
KSK+ G+ P TTL++DFL SY+G N+RA+S
Sbjct: 338 KSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAAS 380
>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum]
Length = 466
Score = 409 bits (1051), Expect = e-111
Identities = 207/317 (65%), Positives = 248/317 (78%), Gaps = 1/317 (0%)
Frame = +3
Query: 273 TPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 452
T T R+LC G VPEH+++R EE+GY PT VQ L+LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 63 TATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLAYL 122
Query: 453 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 629
L + S ID RS+VQALIVVP+RELG+QVTKV R L AKP + +CTVMALLDGGM
Sbjct: 123 LQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDGGM 182
Query: 630 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 809
L RHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL++ ++LV+DEVDFMF+SSK++ L++
Sbjct: 183 LNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKR 242
Query: 810 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 989
LL YS+ RQT+ ASASIPQH RFL+DCVQQKWTK DVVHVHVN VEPMPS LHH+FV
Sbjct: 243 LLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFV 302
Query: 990 ICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXX 1169
+C K+E+ +L LL+ DSP+S IIFVSEQSEKSK+ G+ PP TL++DFL +S G
Sbjct: 303 VCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVDFLMSSSGGFSNV 362
Query: 1170 XXXXXXXXXNARASSFS 1220
N RA+S S
Sbjct: 363 SLLEEDMNFNKRAASLS 379
>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 473
Score = 409 bits (1050), Expect = e-111
Identities = 201/313 (64%), Positives = 252/313 (80%), Gaps = 1/313 (0%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR+LC+G VPEH+L+R +E GY PT++Q +LP+L S RDC+LHAQTGSGKTL YLL
Sbjct: 68 TLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLL 127
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIHT-CTVMALLDGGMLK 635
+FS ++ RS+VQA+IVVP+RELG+QVTKV RVL AKP ++ H CTVMALLDGGML+
Sbjct: 128 IFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLR 187
Query: 636 RHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLL 815
RHKSWLKAEPP IVVAT+GSLCQ+IEK+I KLE++++LVIDEVDF+F+SSKQV L+KLL
Sbjct: 188 RHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQVSSLKKLL 247
Query: 816 GLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 995
YS+ + RQTV ASASIPQH RFLH+C+QQKWTK+DVVHVHVN ++P+PS LHH+FVIC
Sbjct: 248 ASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVIC 307
Query: 996 KKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXX 1175
KK + L L++ D+P+SGIIFV EQSEKSK+ G+ P TTL++DFL SY+G
Sbjct: 308 GKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLL 367
Query: 1176 XXXXXXXNARASS 1214
N+RA+S
Sbjct: 368 LEEEMNFNSRAAS 380
>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Solanum lycopersicum]
Length = 459
Score = 406 bits (1044), Expect = e-111
Identities = 207/317 (65%), Positives = 247/317 (77%), Gaps = 1/317 (0%)
Frame = +3
Query: 273 TPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 452
T TLR+LC G V EH++ RAEEIGY PT VQ +LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 56 TTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALPFLFSGRDCVLHAQTGSGKTLAYL 115
Query: 453 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 629
L V S +D RS+VQALIVVP+RELG+QVTKV R+L A P E + +CTVMALLDGGM
Sbjct: 116 LQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALLDGGM 175
Query: 630 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 809
LKRHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL+ ++LV+DEVDFMF+SSK+V L++
Sbjct: 176 LKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVSSLKR 235
Query: 810 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 989
LL YS+ RQT+ ASASIPQH RFL+DC+QQKWT+ DVVHVHVN VEPMPS LHH+FV
Sbjct: 236 LLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSVEPMPSCLHHRFV 295
Query: 990 ICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXX 1169
+C + E+ +L LL+ DSP+S IIFVSEQSEKSK+ G PPTTL++DFL++S
Sbjct: 296 VCNRMEKNPMLLSLLQTDSPESAIIFVSEQSEKSKKAGSAPPTTLLVDFLKSSCGRFSDI 355
Query: 1170 XXXXXXXXXNARASSFS 1220
N RA+S S
Sbjct: 356 SLLEEDMNFNQRAASLS 372
>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana tabacum]
Length = 365
Score = 405 bits (1041), Expect = e-110
Identities = 202/296 (68%), Positives = 242/296 (81%), Gaps = 1/296 (0%)
Frame = +3
Query: 273 TPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 452
T T R+LC G VPEH+++R EE+GY PT VQ L+LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 63 TATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLAYL 122
Query: 453 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 629
L + S ID RS+VQALIVVP+RELG+QVTKV R L AKP + +CTVMALLDGGM
Sbjct: 123 LQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDGGM 182
Query: 630 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 809
L RHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL++ ++LV+DEVDFMF+SSK++ L++
Sbjct: 183 LNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSLKR 242
Query: 810 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 989
LL YS+ RQT+ ASASIPQH RFL+DCVQQKWTK DVVHVHVN VEPMPS LHH+FV
Sbjct: 243 LLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFV 302
Query: 990 ICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEG 1157
+C K+E+ +L LL+ DSP+S IIFVSEQSEKSK+ G+ PP TL++DFL +S G
Sbjct: 303 VCTKREKNQVLLSLLQVDSPESAIIFVSEQSEKSKKAGNAPPITLLVDFLMSSSGG 358
>gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
Length = 477
Score = 404 bits (1037), Expect = e-110
Identities = 204/315 (64%), Positives = 250/315 (79%), Gaps = 1/315 (0%)
Frame = +3
Query: 279 TLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYLLA 458
TLR++C+ VP+H+L R EE+GY PT+VQ +LP+L SG DC+LHAQTGSGKTL YLL
Sbjct: 72 TLREICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLL 131
Query: 459 VFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGMLK 635
++S I+ RS+VQALIVVP+RELG+QVTKV R+L AKP+ E+ + TVMALLDGGML+
Sbjct: 132 IYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLR 191
Query: 636 RHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRKLL 815
RHKSWLKAEPP IVVAT+GSL QM+EK I KL++MRILV+DEVDF+F+SSKQV +RKLL
Sbjct: 192 RHKSWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLL 251
Query: 816 GLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFVIC 995
YS+ + RQTV ASASIPQH RFLHDC+QQKWTK DVVHVHVNPV+PMPS L H+FVIC
Sbjct: 252 TSYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKGDVVHVHVNPVKPMPSCLLHRFVIC 311
Query: 996 KKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXXXX 1175
+KE+ +L LL+ D P+SGIIFV+EQSEKSK+ G P TTL++DFL+ SY G
Sbjct: 312 GRKEKHRLLLSLLQSDLPESGIIFVNEQSEKSKKAGKAPSTTLIIDFLKASYGGSLEIIL 371
Query: 1176 XXXXXXXNARASSFS 1220
N+RA+S S
Sbjct: 372 LEDNMNFNSRAASLS 386
>ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Glycine max]
Length = 472
Score = 403 bits (1035), Expect = e-110
Identities = 198/315 (62%), Positives = 248/315 (78%), Gaps = 1/315 (0%)
Frame = +3
Query: 273 TPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 452
TPTLR+LC+ VPEHILQR EEIGY PT++Q +LP L SG DC+LHAQTGSGKTL YL
Sbjct: 69 TPTLRELCQSHVPEHILQRMEEIGYVMPTDIQREALPYLFSGLDCILHAQTGSGKTLTYL 128
Query: 453 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEMIH-TCTVMALLDGGM 629
L + S I+ +SSVQAL++VP+RELG+QVTKV R L AKP G + +C++MALLDGG
Sbjct: 129 LLIHSIINAAKSSVQALVLVPTRELGMQVTKVARTLAAKPTGVDGEQKSCSIMALLDGGT 188
Query: 630 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 809
LKRHK+WLKAEPP IVVATVGSLCQM+E++ LE +R+L++DEVD +F+SSKQV LRK
Sbjct: 189 LKRHKTWLKAEPPTIVVATVGSLCQMLERHFFSLETVRVLIVDEVDCIFNSSKQVSSLRK 248
Query: 810 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 989
+L YS+ + RQTV ASASIPQHNRF+HD VQQKWTK DVVH+HV+ VEPMPS+L+H+FV
Sbjct: 249 ILTSYSSCNNRQTVFASASIPQHNRFIHDSVQQKWTKRDVVHIHVSAVEPMPSRLYHRFV 308
Query: 990 ICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXX 1169
IC K +L L L++ D+P+SGIIFV+EQSEKSK+ G P T+L++DFL+TSY+G
Sbjct: 309 ICDTKRKLHTLLSLIQSDAPESGIIFVAEQSEKSKKAGKAPSTSLLIDFLKTSYQGDLDI 368
Query: 1170 XXXXXXXXXNARASS 1214
N+RA+S
Sbjct: 369 LLLEDKMNFNSRAAS 383
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Solanum tuberosum]
Length = 462
Score = 402 bits (1033), Expect = e-109
Identities = 205/317 (64%), Positives = 246/317 (77%), Gaps = 1/317 (0%)
Frame = +3
Query: 273 TPTLRDLCRGKVPEHILQRAEEIGYTQPTNVQCLSLPLLLSGRDCVLHAQTGSGKTLAYL 452
T TLR+LC G V EH+++RAEE+GY PT VQ +LP L SGRDCVLHAQTGSGKTLAYL
Sbjct: 56 TTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFLFSGRDCVLHAQTGSGKTLAYL 115
Query: 453 LAVFSAIDFTRSSVQALIVVPSRELGIQVTKVVRVLTAKPVGFEM-IHTCTVMALLDGGM 629
L V S +D RS+VQALIVVP+RELG+QVTKV R+L A P E + +CTVMALLDGGM
Sbjct: 116 LQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALLDGGM 175
Query: 630 LKRHKSWLKAEPPQIVVATVGSLCQMIEKNILKLEAMRILVIDEVDFMFHSSKQVYPLRK 809
LKRHKSWLKAEPP IVVAT+GSLCQM+EK+ILKL+ ++LV+DEVDFMF+SSK+V L++
Sbjct: 176 LKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVSSLKR 235
Query: 810 LLGLYSTIDTRQTVLASASIPQHNRFLHDCVQQKWTKNDVVHVHVNPVEPMPSQLHHKFV 989
LL YS+ RQT+ ASASIPQH RFL+DC+QQKWT+ DVVHVHVN VEPMPS LHH+FV
Sbjct: 236 LLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVNSVEPMPSCLHHRFV 295
Query: 990 ICKKKERLFILQYLLKCDSPKSGIIFVSEQSEKSKRLGHPPPTTLVLDFLQTSYEGXXXX 1169
+C + E+ +L LL+ DSP S IIFVSEQS KSK+ G PPTTL++DFL++S
Sbjct: 296 VCNRTEKNPMLLSLLQTDSPGSAIIFVSEQSGKSKKAGSAPPTTLLVDFLKSSRGRFSDV 355
Query: 1170 XXXXXXXXXNARASSFS 1220
N RA+S S
Sbjct: 356 SLLEEDMNFNQRAASLS 372