BLASTX nr result

ID: Zingiber23_contig00026451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00026451
         (251 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004952308.1| PREDICTED: probable pre-mRNA-splicing factor...   162   3e-38
gb|AFW70820.1| putative RNA helicase family protein [Zea mays]        162   3e-38
ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [S...   162   3e-38
gb|ACN34981.1| unknown [Zea mays]                                     162   3e-38
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]   161   7e-38
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   161   7e-38
ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor...   161   7e-38
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   161   7e-38
gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indi...   161   7e-38
ref|NP_001046623.1| Os02g0301500 [Oryza sativa Japonica Group] g...   161   7e-38
ref|XP_006648562.1| PREDICTED: probable pre-mRNA-splicing factor...   161   9e-38
gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus...   161   9e-38
ref|XP_006374312.1| ATP-dependent RNA helicase family protein [P...   160   2e-37
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   160   2e-37
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   160   2e-37
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   160   2e-37
ref|XP_002331832.1| predicted protein [Populus trichocarpa]           160   2e-37
ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor...   159   5e-37
ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citr...   159   5e-37
gb|EPS73374.1| hypothetical protein M569_01376, partial [Genlise...   159   5e-37

>ref|XP_004952308.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Setaria italica]
          Length = 1222

 Score =  162 bits (411), Expect = 3e-38
 Identities = 79/83 (95%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVVSAGKNFTK
Sbjct: 1047 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTK 1106

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1107 IRKAITAGFFFHAARKDPQEGYR 1129


>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
          Length = 1236

 Score =  162 bits (411), Expect = 3e-38
 Identities = 79/83 (95%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVVSAGKNFTK
Sbjct: 1061 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTK 1120

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1121 IRKAITAGFFFHAARKDPQEGYR 1143


>ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [Sorghum bicolor]
            gi|241922205|gb|EER95349.1| hypothetical protein
            SORBIDRAFT_01g044300 [Sorghum bicolor]
          Length = 1242

 Score =  162 bits (411), Expect = 3e-38
 Identities = 79/83 (95%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVVSAGKNFTK
Sbjct: 1067 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTK 1126

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1127 IRKAITAGFFFHAARKDPQEGYR 1149


>gb|ACN34981.1| unknown [Zea mays]
          Length = 422

 Score =  162 bits (411), Expect = 3e-38
 Identities = 79/83 (95%), Positives = 81/83 (97%)
 Frame = +3

Query: 3   LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
           LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVVSAGKNFTK
Sbjct: 247 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTK 306

Query: 183 IRKAITAGFFFQAARKDSREGYR 251
           IRKAITAGFFF AARKD +EGYR
Sbjct: 307 IRKAITAGFFFHAARKDPQEGYR 329


>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
          Length = 1240

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVVSAG+NFTK
Sbjct: 1065 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGRNFTK 1124

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1125 IRKAITAGFFFHAARKDPQEGYR 1147


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMD+YKLDVVSAGKNFTK
Sbjct: 997  LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTK 1056

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1057 IRKAITAGFFFHAARKDPQEGYR 1079


>ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Brachypodium distachyon]
          Length = 1249

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVV+AGKNFTK
Sbjct: 1074 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVAAGKNFTK 1133

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1134 IRKAITAGFFFHAARKDPQEGYR 1156


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMD+YKLDVVSAGKNFTK
Sbjct: 1000 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTK 1059

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1060 IRKAITAGFFFHAARKDPQEGYR 1082


>gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indica Group]
          Length = 1240

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVVSAG+NFTK
Sbjct: 1065 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGRNFTK 1124

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1125 IRKAITAGFFFHAARKDPQEGYR 1147


>ref|NP_001046623.1| Os02g0301500 [Oryza sativa Japonica Group]
           gi|113536154|dbj|BAF08537.1| Os02g0301500, partial
           [Oryza sativa Japonica Group]
          Length = 546

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = +3

Query: 3   LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
           LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLDVVSAG+NFTK
Sbjct: 371 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGRNFTK 430

Query: 183 IRKAITAGFFFQAARKDSREGYR 251
           IRKAITAGFFF AARKD +EGYR
Sbjct: 431 IRKAITAGFFFHAARKDPQEGYR 453


>ref|XP_006648562.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Oryza brachyantha]
          Length = 1187

 Score =  161 bits (407), Expect = 9e-38
 Identities = 77/83 (92%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMDRYKLD+VSAG+NFTK
Sbjct: 1012 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDIVSAGRNFTK 1071

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1072 IRKAITAGFFFHAARKDPQEGYR 1094


>gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus vulgaris]
          Length = 1201

 Score =  161 bits (407), Expect = 9e-38
 Identities = 77/83 (92%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMD+YKLDVVSAGKNFTK
Sbjct: 1026 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTK 1085

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            +RKAITAGFFF AARKD +EGYR
Sbjct: 1086 VRKAITAGFFFHAARKDPQEGYR 1108


>ref|XP_006374312.1| ATP-dependent RNA helicase family protein [Populus trichocarpa]
            gi|550322071|gb|ERP52109.1| ATP-dependent RNA helicase
            family protein [Populus trichocarpa]
          Length = 1177

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/83 (92%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLL+IMD+YKLDVVSAGKNFTK
Sbjct: 1002 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTK 1061

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1062 IRKAITAGFFFHAARKDPQEGYR 1084


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform X1 [Glycine max]
            gi|571539750|ref|XP_006601342.1| PREDICTED: probable
            pre-mRNA-splicing factor ATP-dependent RNA helicase-like
            isoform X2 [Glycine max]
          Length = 1197

 Score =  160 bits (404), Expect = 2e-37
 Identities = 76/83 (91%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMD+YKLDVVSAGKNFTK
Sbjct: 1022 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTK 1081

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            +RKAITAGFFF A+RKD +EGYR
Sbjct: 1082 VRKAITAGFFFHASRKDPQEGYR 1104


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform X1 [Glycine max]
            gi|571512325|ref|XP_006596566.1| PREDICTED: probable
            pre-mRNA-splicing factor ATP-dependent RNA helicase-like
            isoform X2 [Glycine max]
          Length = 1203

 Score =  160 bits (404), Expect = 2e-37
 Identities = 76/83 (91%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLLTIMD+YKLDVVSAGKNFTK
Sbjct: 1028 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTK 1087

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            +RKAITAGFFF A+RKD +EGYR
Sbjct: 1088 VRKAITAGFFFHASRKDPQEGYR 1110


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/83 (92%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLL+IMD+YKLDVVSAGKNFTK
Sbjct: 1002 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTK 1061

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1062 IRKAITAGFFFHAARKDPQEGYR 1084


>ref|XP_002331832.1| predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/83 (92%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLL+IMD+YKLDVVSAGKNFTK
Sbjct: 996  LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTK 1055

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1056 IRKAITAGFFFHAARKDPQEGYR 1078


>ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform X1 [Citrus sinensis]
            gi|568825052|ref|XP_006466903.1| PREDICTED: probable
            pre-mRNA-splicing factor ATP-dependent RNA helicase-like
            isoform X2 [Citrus sinensis]
          Length = 1176

 Score =  159 bits (401), Expect = 5e-37
 Identities = 76/83 (91%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLL+IMD+YKLDV+SAGKNFTK
Sbjct: 1001 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTK 1060

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1061 IRKAITAGFFFHAARKDPQEGYR 1083


>ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citrus clementina]
            gi|557527537|gb|ESR38787.1| hypothetical protein
            CICLE_v10024740mg [Citrus clementina]
          Length = 1176

 Score =  159 bits (401), Expect = 5e-37
 Identities = 76/83 (91%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLL+IMD+YKLDV+SAGKNFTK
Sbjct: 1001 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTK 1060

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF AARKD +EGYR
Sbjct: 1061 IRKAITAGFFFHAARKDPQEGYR 1083


>gb|EPS73374.1| hypothetical protein M569_01376, partial [Genlisea aurea]
          Length = 1164

 Score =  159 bits (401), Expect = 5e-37
 Identities = 76/83 (91%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRKAQDVRKQLLTIMDRYKLDVVSAGKNFTK 182
            LTLLAVYEAWKAKNFSGPWCFENFVQSRSLR+AQDVRKQLL+IMD+YKLDVVSAGKNFTK
Sbjct: 989  LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTK 1048

Query: 183  IRKAITAGFFFQAARKDSREGYR 251
            IRKAITAGFFF A+RKD +EGYR
Sbjct: 1049 IRKAITAGFFFHASRKDPQEGYR 1071


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