BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00026430
         (588 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus pe...   155   6e-36
gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao]                  150   2e-34
gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao]                  150   2e-34
gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]                  150   2e-34
gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis]               143   4e-32
ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|2235...   142   6e-32
ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citr...   137   2e-30
ref|XP_002311080.2| hypothetical protein POPTR_0008s03630g [Popu...   134   1e-29
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...   133   4e-29
ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera...   132   5e-29
ref|XP_002316382.2| pumilio/Puf RNA-binding domain-containing fa...   132   7e-29
ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis s...   131   1e-28
ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis s...   131   1e-28
ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|2235...   131   1e-28
ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria ...   130   3e-28
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   130   3e-28
ref|XP_002316273.2| hypothetical protein POPTR_0010s20870g [Popu...   130   3e-28
ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing fa...   129   6e-28
ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula] g...   127   2e-27
ref|XP_002311179.2| hypothetical protein POPTR_0008s05850g [Popu...   127   2e-27

>gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
          Length = 1021

 Score =  155 bits (393), Expect = 6e-36
 Identities = 93/208 (44%), Positives = 123/208 (59%), Gaps = 16/208 (7%)
 Frame = +3

Query: 12  SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHD 191
           +GN           +++EQ+N  A   + DL   NI RSGSAPPTV+ S TAV SLFG+ 
Sbjct: 21  NGNLEDALQSELELILREQRNQHAIHRERDL---NIYRSGSAPPTVEGSLTAVGSLFGNS 77

Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFH 371
            F D TS  R+  + G LSE+++RSHP YLSYY+S++N NPR+PPP +S+EDWR+ QRF 
Sbjct: 78  DFRDVTS--RISNNNGVLSEDEIRSHPTYLSYYYSHDNINPRLPPPLLSREDWRIAQRFQ 135

Query: 372 PRGSSFGGIGDRIGRNEYIKNDSQSSSLFSVHPSLEMP----DLQKL------------P 503
             GSSF G+GD   R + + +D  S SLFS    L +     DL +L             
Sbjct: 136 VGGSSFEGVGD--WRKKKLVDDGDSLSLFSAQLGLSVQKAENDLMELRNGNGSNLPKQTS 193

Query: 504 GELLEQNSNEFIRMPDVGLGTRRKSFAD 587
            E L++ S+  I +   GLG RRKSFAD
Sbjct: 194 SEWLDRGSDGLIGLSTSGLGARRKSFAD 221


>gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao]
          Length = 767

 Score =  150 bits (380), Expect = 2e-34
 Identities = 91/199 (45%), Positives = 117/199 (58%), Gaps = 21/199 (10%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           ++Q  +N +    + DL   NI RSGSAPPTV+ S +AV SLF +  FGD      V  S
Sbjct: 26  ILQAHRNQQFVGRERDL---NIYRSGSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGS 82

Query: 234 G-----GFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGI 398
                 G LSE+++RSHP YLSYY+S+EN NPR+PPP +SKEDWRV QRF   GSS G I
Sbjct: 83  SSSSNNGMLSEDEIRSHPAYLSYYYSHENINPRLPPPLLSKEDWRVAQRFQASGSSLGNI 142

Query: 399 GDRIGRNEYIKNDSQSSSLFSVHPSL----EMPDL------------QKLPGELLEQNSN 530
           GD   R + + +   SSSLFS+ P L    E  DL            +K+  E L++ S+
Sbjct: 143 GD--WRKKKLVDGGDSSSLFSMQPGLSVQQEQNDLMELRNTNARNTSRKMSAEWLDRGSD 200

Query: 531 EFIRMPDVGLGTRRKSFAD 587
             + +   GLG RRKSFAD
Sbjct: 201 GLVGLSGTGLGARRKSFAD 219


>gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao]
          Length = 907

 Score =  150 bits (380), Expect = 2e-34
 Identities = 91/199 (45%), Positives = 117/199 (58%), Gaps = 21/199 (10%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           ++Q  +N +    + DL   NI RSGSAPPTV+ S +AV SLF +  FGD      V  S
Sbjct: 26  ILQAHRNQQFVGRERDL---NIYRSGSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGS 82

Query: 234 G-----GFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGI 398
                 G LSE+++RSHP YLSYY+S+EN NPR+PPP +SKEDWRV QRF   GSS G I
Sbjct: 83  SSSSNNGMLSEDEIRSHPAYLSYYYSHENINPRLPPPLLSKEDWRVAQRFQASGSSLGNI 142

Query: 399 GDRIGRNEYIKNDSQSSSLFSVHPSL----EMPDL------------QKLPGELLEQNSN 530
           GD   R + + +   SSSLFS+ P L    E  DL            +K+  E L++ S+
Sbjct: 143 GD--WRKKKLVDGGDSSSLFSMQPGLSVQQEQNDLMELRNTNARNTSRKMSAEWLDRGSD 200

Query: 531 EFIRMPDVGLGTRRKSFAD 587
             + +   GLG RRKSFAD
Sbjct: 201 GLVGLSGTGLGARRKSFAD 219


>gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]
          Length = 1026

 Score =  150 bits (380), Expect = 2e-34
 Identities = 91/199 (45%), Positives = 117/199 (58%), Gaps = 21/199 (10%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           ++Q  +N +    + DL   NI RSGSAPPTV+ S +AV SLF +  FGD      V  S
Sbjct: 26  ILQAHRNQQFVGRERDL---NIYRSGSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGS 82

Query: 234 G-----GFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGI 398
                 G LSE+++RSHP YLSYY+S+EN NPR+PPP +SKEDWRV QRF   GSS G I
Sbjct: 83  SSSSNNGMLSEDEIRSHPAYLSYYYSHENINPRLPPPLLSKEDWRVAQRFQASGSSLGNI 142

Query: 399 GDRIGRNEYIKNDSQSSSLFSVHPSL----EMPDL------------QKLPGELLEQNSN 530
           GD   R + + +   SSSLFS+ P L    E  DL            +K+  E L++ S+
Sbjct: 143 GD--WRKKKLVDGGDSSSLFSMQPGLSVQQEQNDLMELRNTNARNTSRKMSAEWLDRGSD 200

Query: 531 EFIRMPDVGLGTRRKSFAD 587
             + +   GLG RRKSFAD
Sbjct: 201 GLVGLSGTGLGARRKSFAD 219


>gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis]
          Length = 989

 Score =  143 bits (360), Expect = 4e-32
 Identities = 88/195 (45%), Positives = 122/195 (62%), Gaps = 16/195 (8%)
 Frame = +3

Query: 51  ALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQE 230
           ++++E +N   +  D + D LNI RSGSAPPTV+ S +AV SLFG+    +  ++ R   
Sbjct: 17  SILREHRNQ--SVMDRERD-LNIYRSGSAPPTVEGSLSAVGSLFGNSDVKEINTNSRGFN 73

Query: 231 SGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDRI 410
           +GG LSE+++RSHP YLSYY+S++N NPR+PPP +SKEDWR+ QRF   GSSFG IGD  
Sbjct: 74  NGG-LSEDEIRSHPAYLSYYYSHDNMNPRLPPPLLSKEDWRIAQRFQAGGSSFGEIGD-- 130

Query: 411 GRNEYIKNDSQSSSLFSVHPSL-------EMPDLQKLPGE---------LLEQNSNEFIR 542
            R + I+ D +SSSLFS+ P L       ++ +L+   G            ++  N  I 
Sbjct: 131 WRKKGIE-DGESSSLFSMQPGLSVQQAEDDLMELRNASGSNHSWQTSSGWTDRGLNSSIG 189

Query: 543 MPDVGLGTRRKSFAD 587
           +   GLG RRKSFAD
Sbjct: 190 LSSNGLGARRKSFAD 204


>ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|223529499|gb|EEF31455.1|
           pumilio, putative [Ricinus communis]
          Length = 1024

 Score =  142 bits (358), Expect = 6e-32
 Identities = 85/207 (41%), Positives = 112/207 (54%), Gaps = 15/207 (7%)
 Frame = +3

Query: 12  SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHD 191
           +GN           ++Q Q+N      + DL   NI RSGSAPPTV+ S +AV SLF + 
Sbjct: 21  NGNLEDSFQSELEMILQAQRNQHYIDRERDL---NIYRSGSAPPTVEGSLSAVGSLFRNP 77

Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFH 371
            F D +S      S   LS++++RSHP YLSYY+S++N NPR+PPP +SKEDWRV QRF 
Sbjct: 78  NFSDVSSISNSSRSNTVLSDDEIRSHPAYLSYYYSHDNINPRLPPPLLSKEDWRVAQRFQ 137

Query: 372 PRGSSFGGIGDRIGRNEYIKNDSQSSSLFSVHPSLEMPDL---------------QKLPG 506
             G   G IGD   R +   ++   SSLFS+ P L    L                + P 
Sbjct: 138 ASGPLLGDIGDL--RKKKFVDEGDGSSLFSLQPRLSAQKLDNDLMGIRNVRNNFSMQNPA 195

Query: 507 ELLEQNSNEFIRMPDVGLGTRRKSFAD 587
           E L++ S +   +   GLG RRKSFAD
Sbjct: 196 EWLDRGSGDSNGLQSAGLGARRKSFAD 222


>ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citrus clementina]
           gi|567887890|ref|XP_006436467.1| hypothetical protein
           CICLE_v10030594mg [Citrus clementina]
           gi|568864458|ref|XP_006485615.1| PREDICTED: pumilio
           homolog 4-like isoform X1 [Citrus sinensis]
           gi|568864460|ref|XP_006485616.1| PREDICTED: pumilio
           homolog 4-like isoform X2 [Citrus sinensis]
           gi|568864462|ref|XP_006485617.1| PREDICTED: pumilio
           homolog 4-like isoform X3 [Citrus sinensis]
           gi|557538662|gb|ESR49706.1| hypothetical protein
           CICLE_v10030594mg [Citrus clementina]
           gi|557538663|gb|ESR49707.1| hypothetical protein
           CICLE_v10030594mg [Citrus clementina]
          Length = 1029

 Score =  137 bits (345), Expect = 2e-30
 Identities = 85/181 (46%), Positives = 106/181 (58%), Gaps = 21/181 (11%)
 Frame = +3

Query: 108 ELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQESG-----GFLSEEDLRSHP 272
           ++NI RSGSAPPTV+ S  AV SLF  D  G   +       G     G LSE+++RSHP
Sbjct: 52  DVNIYRSGSAPPTVEGSLNAVGSLFLRDNPGSICNTAAGGSGGNGDINGILSEDEIRSHP 111

Query: 273 DYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDRIGRNEYIKNDSQSSS 452
            YLSYY+S+EN NPR+PPP +SKEDWRV QRF   GSS G I D   R + + N    SS
Sbjct: 112 AYLSYYYSHENINPRLPPPLVSKEDWRVAQRFQGGGSSLGDIAD--WRKKGV-NGGDRSS 168

Query: 453 LFSVHPSLEM----PDLQKL------------PGELLEQNSNEFIRMPDVGLGTRRKSFA 584
           LFS+ P + +     DL +L              E LE+ S+  I +P  GLG+RRKSFA
Sbjct: 169 LFSMQPGISVLQAENDLMELRNAARRNLSRDASAEWLERGSDRLIGVPAAGLGSRRKSFA 228

Query: 585 D 587
           D
Sbjct: 229 D 229


>ref|XP_002311080.2| hypothetical protein POPTR_0008s03630g [Populus trichocarpa]
           gi|566182194|ref|XP_006379542.1| pumilio/Puf RNA-binding
           domain-containing family protein [Populus trichocarpa]
           gi|566182196|ref|XP_002311079.2| hypothetical protein
           POPTR_0008s03630g [Populus trichocarpa]
           gi|550332361|gb|EEE88447.2| hypothetical protein
           POPTR_0008s03630g [Populus trichocarpa]
           gi|550332362|gb|ERP57339.1| pumilio/Puf RNA-binding
           domain-containing family protein [Populus trichocarpa]
           gi|550332363|gb|EEE88446.2| hypothetical protein
           POPTR_0008s03630g [Populus trichocarpa]
          Length = 1031

 Score =  134 bits (338), Expect = 1e-29
 Identities = 91/214 (42%), Positives = 118/214 (55%), Gaps = 23/214 (10%)
 Frame = +3

Query: 15  GNXXXXXXXXXXALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDG 194
           GN           ++Q ++ N+    DLD       RSGSAPPTV+ S +AV SLF ++ 
Sbjct: 24  GNLEDNLQSELELILQARRRNQRIERDLDR-----YRSGSAPPTVEGSLSAVGSLFRNNN 78

Query: 195 FGDGTSHLRVQESGG-----FLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQ 359
             D  S   V  S G      L+EE++RSHP YLSYY+S+++ NPR+PPP +SKEDWRV 
Sbjct: 79  LSDINS---VTSSNGNCNNVVLTEEEIRSHPSYLSYYYSHDSINPRLPPPLLSKEDWRVA 135

Query: 360 QRFHPRGSSFGGIGDRIGRNEYIKNDSQSSSLFSVHPSLEMPDLQKLPGELLEQNS---N 530
           QRF   GS FGGIG+   R   +  DS SSSLFS+ P L    + K+  +L+E ++   N
Sbjct: 136 QRFQSSGSMFGGIGNL--RKNKVVEDSDSSSLFSIQPGL---SVHKVDIDLIESSNSSRN 190

Query: 531 EFIR----------MPDVG-----LGTRRKSFAD 587
             IR            D G     LG RRKSFAD
Sbjct: 191 NVIRNASSKWLDRGSSDPGLQRSRLGARRKSFAD 224


>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score =  133 bits (334), Expect = 4e-29
 Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 15/193 (7%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           LI+EQ+    AA D +  EL+I RSGSAPPTV+ S +AV  LFG  G G  T        
Sbjct: 31  LIREQRRQEVAASDRE-KELSIYRSGSAPPTVEGSLSAVGGLFGGGGDGSDT-------- 81

Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRG---------SS 386
            GF SEE+LR+ P Y++YY+SN N NPR+PPP +SKEDWR  QR H  G         SS
Sbjct: 82  -GFASEEELRADPAYVNYYYSNVNLNPRLPPPRLSKEDWRFAQRLHGGGAGGGGSGSSSS 140

Query: 387 FGGIGDR--IGRNEYIKNDSQSSSLFSVHPSL----EMPDLQKLPGELLEQNSNEFIRMP 548
            GGIGDR  +GR      D   SSLF + P      +    +    + +E   +  I +P
Sbjct: 141 VGGIGDRRKVGRG----GDGNGSSLFLMQPGFNGQKDENGAESRKAQGVEWGGDGLIGLP 196

Query: 549 DVGLGTRRKSFAD 587
            +GLG+R+KS A+
Sbjct: 197 GLGLGSRQKSLAE 209


>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
           gi|296085990|emb|CBI31431.3| unnamed protein product
           [Vitis vinifera]
          Length = 1026

 Score =  132 bits (333), Expect = 5e-29
 Identities = 84/195 (43%), Positives = 111/195 (56%), Gaps = 16/195 (8%)
 Frame = +3

Query: 51  ALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQE 230
           A+++EQ+N        DL   NI RSGSAPPTV+ S +AV  LF +    +       + 
Sbjct: 35  AMLREQRNRGLVDRGRDL---NIFRSGSAPPTVEGSLSAVGGLFRNADVNEINHRSSNKT 91

Query: 231 SGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDRI 410
           + G L+E+++ SHP YLSYY+S+EN NPR+PPP +SKEDWRV QRF   GSSFGG G   
Sbjct: 92  TNGVLTEDEILSHPAYLSYYYSHENINPRLPPPMLSKEDWRVAQRFQ-AGSSFGGSGGWE 150

Query: 411 GRNEYIKNDSQSSSLFSVHPSL-------EMPDLQKLPG---------ELLEQNSNEFIR 542
            +   +  D  SSSLFS  P L       E+ +L+K  G         + LE+ S+    
Sbjct: 151 RKRALV--DDNSSSLFSRQPGLSVHKVESELMELRKAAGRHIPRQTSSDWLERGSDGLTG 208

Query: 543 MPDVGLGTRRKSFAD 587
           +   GLG R KSFAD
Sbjct: 209 LSGAGLGPRTKSFAD 223


>ref|XP_002316382.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
           trichocarpa] gi|550330425|gb|EEF02553.2| pumilio/Puf
           RNA-binding domain-containing family protein [Populus
           trichocarpa]
          Length = 1001

 Score =  132 bits (332), Expect = 7e-29
 Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           ++Q Q+ N+    DLD     I RSGSAPPTV+ S +AV SLF +    D  S      +
Sbjct: 24  ILQSQRCNQRIERDLD-----IYRSGSAPPTVEGSLSAVGSLFRNYNLSDVNS----VSN 74

Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDRIG 413
              L+E+++RSHP YL YY+S++N NPR+PPP +SKEDW V QRF   GSSFGGIGD   
Sbjct: 75  NVVLAEDEIRSHPSYLLYYYSHDNINPRLPPPLLSKEDWLVAQRFQSSGSSFGGIGDL-- 132

Query: 414 RNEYIKNDSQSSSLFSVHPSLEMPDLQKLPGELLEQNS---------------NEFIRMP 548
           RN  + ++S  SSLFS+ P L +  +     EL   N+               ++  ++ 
Sbjct: 133 RNNKVVDNSDRSSLFSMQPGLSVHKVDNDLTELRNSNTTCLTRNASAEWLDRISDSHKLH 192

Query: 549 DVGLGTRRKSFAD 587
              LG RRKSFAD
Sbjct: 193 GSRLGPRRKSFAD 205


>ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
          Length = 997

 Score =  131 bits (330), Expect = 1e-28
 Identities = 84/211 (39%), Positives = 112/211 (53%), Gaps = 19/211 (9%)
 Frame = +3

Query: 12  SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHD 191
           +GN           L++E  N+  A    DL   NI RSGSAPPTV+ S  AV SLF   
Sbjct: 21  AGNFEDNLRTELELLLRENSNHSVAGRGGDL---NIYRSGSAPPTVEGSINAVGSLFTSS 77

Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFH 371
            + +  +  +   + G LSE+++RSHPDYLSYY+SN++ NPR+PPP +SKEDWRV QRF 
Sbjct: 78  YYNEFNT--KSGSNDGVLSEDEIRSHPDYLSYYYSNDHINPRLPPPLVSKEDWRVAQRFQ 135

Query: 372 PRGSSFGGIGDRIGRNEYIKNDSQSSSLFSVHPSLEMPDLQKLPGELLE----------- 518
             GSS G  GD   +   + + + SSSLFS+ P   +    K  G ++E           
Sbjct: 136 GIGSSLGRQGDWNWKK--LVDGNTSSSLFSMQPGSSVQRTDKNNGNVMEFGDANGKNLPR 193

Query: 519 --------QNSNEFIRMPDVGLGTRRKSFAD 587
                   +    F+     GLG RRKSFAD
Sbjct: 194 KTLSEWHDRGREGFVGSGGNGLGARRKSFAD 224


>ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
          Length = 996

 Score =  131 bits (330), Expect = 1e-28
 Identities = 84/211 (39%), Positives = 112/211 (53%), Gaps = 19/211 (9%)
 Frame = +3

Query: 12  SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHD 191
           +GN           L++E  N+  A    DL   NI RSGSAPPTV+ S  AV SLF   
Sbjct: 21  AGNFEDNLRTELELLLRENSNHSVAGRGGDL---NIYRSGSAPPTVEGSINAVGSLFTSS 77

Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFH 371
            + +  +  +   + G LSE+++RSHPDYLSYY+SN++ NPR+PPP +SKEDWRV QRF 
Sbjct: 78  YYNEFNT--KSGSNDGVLSEDEIRSHPDYLSYYYSNDHINPRLPPPLVSKEDWRVAQRFQ 135

Query: 372 PRGSSFGGIGDRIGRNEYIKNDSQSSSLFSVHPSLEMPDLQKLPGELLE----------- 518
             GSS G  GD   +   + + + SSSLFS+ P   +    K  G ++E           
Sbjct: 136 GIGSSLGRQGDWNWKK--LVDGNTSSSLFSMQPGSSVQRTDKNNGNVMEFGDANGKNLPR 193

Query: 519 --------QNSNEFIRMPDVGLGTRRKSFAD 587
                   +    F+     GLG RRKSFAD
Sbjct: 194 KTLSEWHDRGREGFVGSGGNGLGARRKSFAD 224


>ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|223536477|gb|EEF38124.1|
           pumilio, putative [Ricinus communis]
          Length = 1011

 Score =  131 bits (329), Expect = 1e-28
 Identities = 74/178 (41%), Positives = 104/178 (58%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           LI+EQ+  + AA D +  ELNI RSGSAPPTV+ S  ++  LF   G     +       
Sbjct: 27  LIREQRLQQEAASDRE-KELNIYRSGSAPPTVEGSLNSIGGLFDTTGLAGIAN---TNSK 82

Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDRIG 413
           GGFLSEE++RS P Y++YY+SN N NPR+PPP +SKEDWR  QR H        +GDR  
Sbjct: 83  GGFLSEEEIRSDPAYVNYYYSNVNLNPRLPPPVLSKEDWRFAQRLHGGAGVNSAVGDRRK 142

Query: 414 RNEYIKNDSQSSSLFSVHPSLEMPDLQKLPGELLEQNSNEFIRMPDVGLGTRRKSFAD 587
            +     +  + SLF+V P +   + +   G  +E   +  I +P +GLG+R+KS A+
Sbjct: 143 GSSSCGENEGNRSLFAVQPGVGGGNEENGNGGGVEWGGDGLIGLPGLGLGSRQKSIAE 200


>ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria vesca subsp. vesca]
          Length = 1022

 Score =  130 bits (327), Expect = 3e-28
 Identities = 87/208 (41%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
 Frame = +3

Query: 12  SGNXXXXXXXXXXALIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHD 191
           +GN           ++++ +N +A     DL   N+ RSGSAPPTV+ S +AV SLF + 
Sbjct: 21  NGNLSDVLQSELELILRQHRNQQAIHMGRDL---NMYRSGSAPPTVEGSLSAVGSLFRNS 77

Query: 192 GFGDGTSHLRVQESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFH 371
            F D     RV  + G  SE+++RSH  YLSYY+S++N NPR PPP +S+EDWRV QRF 
Sbjct: 78  DFRDRDMSSRVSSNNGGFSEDEVRSHIAYLSYYYSHDNINPRNPPPLLSREDWRVAQRFQ 137

Query: 372 PRGSSFGGIGDRIGRNEYIKNDSQSSSLFSVHPSLEMP----DLQKL------------P 503
             GSSF G GD   R   I  D    SLFS  P L       DL KL             
Sbjct: 138 -SGSSFEGNGD--WRRNNIVGDG-DKSLFSTQPGLSAQKTENDLNKLRNANGNSMPRHTS 193

Query: 504 GELLEQNSNEFIRMPDVGLGTRRKSFAD 587
            E L+ +S         GLG RRKSFAD
Sbjct: 194 SEWLDNSSTSLTGFSTNGLGARRKSFAD 221


>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  130 bits (327), Expect = 3e-28
 Identities = 78/172 (45%), Positives = 99/172 (57%), Gaps = 12/172 (6%)
 Frame = +3

Query: 108 ELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRV-------QESGGFLSEEDLRS 266
           ELN+ RSGSAPPTV+ S +AV  LFG  G G GT+   V       +   GF SEE+LRS
Sbjct: 44  ELNLYRSGSAPPTVEGSLSAVGGLFGGGGGGAGTAAGAVFSEFSGAKSGNGFSSEEELRS 103

Query: 267 HPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDRIGRNEYIKNDSQS 446
            P YLSYY+SN N NPR+PPP +SKEDWR  QR     S  GGIGDR  R     +D+  
Sbjct: 104 DPAYLSYYYSNVNLNPRLPPPLLSKEDWRFTQRLKGGASVLGGIGDR--RKVNRADDNGG 161

Query: 447 SSLFSVHPSLEMPDLQ-----KLPGELLEQNSNEFIRMPDVGLGTRRKSFAD 587
            SLF+  P   M   +     + P    E   +  I +P +GLG+++KS A+
Sbjct: 162 RSLFATPPGFNMRKQESEVESENPRGSAEWGGDGLIGLPGLGLGSKQKSLAE 213


>ref|XP_002316273.2| hypothetical protein POPTR_0010s20870g [Populus trichocarpa]
           gi|550330257|gb|EEF02444.2| hypothetical protein
           POPTR_0010s20870g [Populus trichocarpa]
          Length = 973

 Score =  130 bits (326), Expect = 3e-28
 Identities = 78/179 (43%), Positives = 106/179 (59%), Gaps = 1/179 (0%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           LI+EQ+  + AA + +  ELNI RSGSAPPTV+ S +++  LF     G G   ++    
Sbjct: 27  LIREQRLQQEAASERE-KELNIYRSGSAPPTVEGSLSSIGGLFD----GTGIPGIKKSNK 81

Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFH-PRGSSFGGIGDRI 410
           G FLSEED RS P Y++YY+SN N NPR+PPP +SKEDWR  QR H   G S   +GDR 
Sbjct: 82  GEFLSEEDFRSDPAYVNYYYSNVNLNPRLPPPLLSKEDWRFAQRLHGSSGGSNSVVGDRS 141

Query: 411 GRNEYIKNDSQSSSLFSVHPSLEMPDLQKLPGELLEQNSNEFIRMPDVGLGTRRKSFAD 587
             +    N+ Q  SLF+V P       +   G  +E   +  I +P +GLG+R+KS A+
Sbjct: 142 KGSRGGDNEGQ-RSLFAVQPGFGGGQEENGNGNGVEWGGDGLIGLPGLGLGSRQKSIAE 199


>ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
           trichocarpa] gi|550348126|gb|EEE84664.2| pumilio/Puf
           RNA-binding domain-containing family protein [Populus
           trichocarpa]
          Length = 1065

 Score =  129 bits (324), Expect = 6e-28
 Identities = 80/186 (43%), Positives = 107/186 (57%), Gaps = 8/186 (4%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGT--SHLRVQ 227
           L++EQ+   A   D    ELN+ RSGSAPPTV+ S  AV  LFG  G G  +    +  +
Sbjct: 29  LLREQRRQEA---DDREKELNLYRSGSAPPTVEGSLNAVGGLFGGGGNGGASFSDFIGGK 85

Query: 228 ESGGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDR 407
              GF SE++LRS P YLSYY+SN N NPR+PPP +SKEDWR  QR     S  GGIGDR
Sbjct: 86  NGNGFTSEKELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRSAQRLKGGSSVLGGIGDR 145

Query: 408 IGRNEYIKNDSQSSSLFSVHPSLEM------PDLQKLPGELLEQNSNEFIRMPDVGLGTR 569
             R     ++    S+FS+ P  E        + +K+ G  LE   +  I +P +GL ++
Sbjct: 146 --RKGSRADNGNGRSMFSMPPGFESRNQDSEVESEKVSGS-LEWGGDGLIGLPGLGLASK 202

Query: 570 RKSFAD 587
           +KSFA+
Sbjct: 203 QKSFAE 208


>ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
           gi|355507767|gb|AES88909.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 1025

 Score =  127 bits (320), Expect = 2e-27
 Identities = 75/167 (44%), Positives = 95/167 (56%), Gaps = 7/167 (4%)
 Frame = +3

Query: 108 ELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES-GGFLSEEDLRSHPDYLS 284
           ELNI RSGSAPPTV+ S  AV  LFG  G   G S     +   G +SEE+LRS P YL 
Sbjct: 44  ELNIFRSGSAPPTVEGSLNAVGGLFGAGGVAGGFSDFPGNKDVNGVVSEEELRSDPAYLQ 103

Query: 285 YYFSNENHNPRMPPPAISKEDWRVQQRFHPRGSSFGGIGDRIGRNEYIKNDSQSSSLFSV 464
           YY+SN N NPR+PPP +SKEDWR QQR     S+ GGIGDR  R   + +DS   S+FS 
Sbjct: 104 YYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASAVGGIGDR--RKGNMTDDSGGRSMFST 161

Query: 465 HPSLEMPDLQKLPGE------LLEQNSNEFIRMPDVGLGTRRKSFAD 587
            P       ++   E        E   +  I +P +GL +++KS A+
Sbjct: 162 PPGFNFRKQERSEVENEKTRGSAEWGGDGLIGLPSLGLRSKQKSLAE 208


>ref|XP_002311179.2| hypothetical protein POPTR_0008s05850g [Populus trichocarpa]
           gi|550332510|gb|EEE88546.2| hypothetical protein
           POPTR_0008s05850g [Populus trichocarpa]
          Length = 999

 Score =  127 bits (319), Expect = 2e-27
 Identities = 80/188 (42%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
 Frame = +3

Query: 54  LIQEQQNNRAAAFDLDLDELNILRSGSAPPTVDDSRTAVWSLFGHDGFGDGTSHLRVQES 233
           LI+EQ+  + A  +++  ELNI RSGSAPPTV+ S +++  LF     G G   ++    
Sbjct: 27  LIREQRLQQEATSEIE-KELNIYRSGSAPPTVEGSLSSIGGLFD----GTGIPGIKNSNR 81

Query: 234 GGFLSEEDLRSHPDYLSYYFSNENHNPRMPPPAISKEDWRVQQRFH-PRGSSFGGIGDRI 410
           GGFLSEE LRS P Y++YY+SN N NPR+PPP++SKEDWR  QR H   G S   +GDR 
Sbjct: 82  GGFLSEEVLRSDPAYVNYYYSNVNLNPRLPPPSLSKEDWRFAQRLHGSGGGSNSVVGDRR 141

Query: 411 GRNEYIKNDSQSSSLFSVHPSLEMPDLQKLPGELLEQNSNE---------FIRMPDVGLG 563
             +   +N+    SLF+V P           G  +E+N NE          I +P +GLG
Sbjct: 142 RGSRGGENEGH-RSLFAVQPGF---------GGGMEENGNENGVEWGGDGLIGLPGLGLG 191

Query: 564 TRRKSFAD 587
           +R+KS A+
Sbjct: 192 SRQKSIAE 199