BLASTX nr result
ID: Zingiber23_contig00026366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00026366
(258 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT29820.1| E3 ubiquitin-protein ligase [Aegilops tauschii] 77 3e-12
gb|EMS53710.1| hypothetical protein TRIUR3_16496 [Triticum urartu] 77 3e-12
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu... 75 9e-12
ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 75 1e-11
ref|XP_004954169.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 74 3e-11
ref|XP_006648026.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 73 3e-11
gb|EMJ26828.1| hypothetical protein PRUPE_ppa005884mg [Prunus pe... 72 6e-11
gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indi... 72 8e-11
gb|AAO72570.1| putative ATP synthetase alpha chain [Oryza sativa... 72 8e-11
gb|EOY26660.1| RING/U-box superfamily protein [Theobroma cacao] 72 1e-10
ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g1... 71 2e-10
ref|NP_001169753.1| uncharacterized LOC100383634 [Zea mays] gi|2... 71 2e-10
ref|XP_006465443.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 69 8e-10
ref|XP_006465441.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 69 8e-10
ref|XP_006465440.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 69 8e-10
ref|XP_006465439.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 69 8e-10
ref|XP_002309588.2| zinc finger family protein [Populus trichoca... 68 1e-09
gb|EMJ16628.1| hypothetical protein PRUPE_ppa006140mg [Prunus pe... 68 1e-09
gb|EXC20793.1| E3 ubiquitin-protein ligase [Morus notabilis] 68 1e-09
ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays] gi|2... 67 2e-09
>gb|EMT29820.1| E3 ubiquitin-protein ligase [Aegilops tauschii]
Length = 609
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2
Query: 104 TRRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
TRR +NYGRR R+ PLNSGLWISVE++VN+SQI AAIVVLSLSR EHPQ
Sbjct: 70 TRRRDNYGRRHRS--PLNSGLWISVEVIVNVSQIVAAIVVLSLSRKEHPQ 117
>gb|EMS53710.1| hypothetical protein TRIUR3_16496 [Triticum urartu]
Length = 409
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2
Query: 104 TRRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
TRR +NYGRR R+ PLNSGLWISVE++VN+SQI AAIVVLSLSR EHPQ
Sbjct: 70 TRRRDNYGRRHRS--PLNSGLWISVEVIVNVSQIVAAIVVLSLSRKEHPQ 117
>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein,
putative [Ricinus communis]
Length = 437
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 ATYDENRPSTST-LPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRRTRTRNPLNSGLWISV 178
A+ +E+RP+TS P +S L+ L RR G R R+PLNSGLWISV
Sbjct: 57 ASSNEDRPTTSVRTPSISHLSTGTSNGSNTRNSSLIRR----GEARRRRSPLNSGLWISV 112
Query: 179 ELVVNLSQITAAIVVLSLSRHEHPQ 253
ELV+ +SQI A+IVVLSLSRHEHP+
Sbjct: 113 ELVLTVSQIIASIVVLSLSRHEHPR 137
>ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RR +NYGRR R+ PLNSGLWIS+E++VN+SQI AAIVVLSLSR EHPQ
Sbjct: 76 RRGDNYGRRHRS--PLNSGLWISIEVIVNVSQIVAAIVVLSLSRKEHPQ 122
>ref|XP_004954169.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Setaria
italica]
Length = 406
Score = 73.6 bits (179), Expect = 3e-11
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +2
Query: 17 NRPSTSTLPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRRTRTRNPLNSGLWISVELVVNL 196
+RPST L + TRRS+NY RR R+ PLNSGLWIS+E++VN+
Sbjct: 47 DRPSTRALVPALQAPSAIGAVPSAGQTSGTRRSDNYVRRHRS--PLNSGLWISIEVIVNV 104
Query: 197 SQITAAIVVLSLSRHEHPQ 253
SQI AAIVVL LSR EHPQ
Sbjct: 105 SQIVAAIVVLCLSRKEHPQ 123
>ref|XP_006648026.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Oryza
brachyantha]
Length = 399
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RRS+NY RR R+ PLNSGLWIS+E++VNLSQI AAIVVLSLSR EHPQ
Sbjct: 74 RRSDNYVRRHRS--PLNSGLWISIEVLVNLSQIVAAIVVLSLSRKEHPQ 120
>gb|EMJ26828.1| hypothetical protein PRUPE_ppa005884mg [Prunus persica]
Length = 439
Score = 72.4 bits (176), Expect = 6e-11
Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 ATYDENRPSTSTLPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRR---TRTRNPLNSGLWI 172
A+ E+RPSTS PR S R++ GRR R R+PLNSGLWI
Sbjct: 60 ASQQEDRPSTS--PRASTFQPSIFSSNGS-----NSRNSATGRRGDTRRRRSPLNSGLWI 112
Query: 173 SVELVVNLSQITAAIVVLSLSRHEHPQT 256
S+ELV+ +SQI A++VVLSLSRHEHP+T
Sbjct: 113 SIELVLTVSQIVASVVVLSLSRHEHPRT 140
>gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein
OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RRS+NY RR R+ PLNSGLWIS+E++VN+SQI AAIVVLSLSR EHPQ
Sbjct: 71 RRSDNYVRRHRS--PLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQ 117
>gb|AAO72570.1| putative ATP synthetase alpha chain [Oryza sativa Japonica Group]
Length = 198
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RRS+NY RR R+ PLNSGLWIS+E++VN+SQI AAIVVLSLSR EHPQ
Sbjct: 71 RRSDNYVRRHRS--PLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQ 117
>gb|EOY26660.1| RING/U-box superfamily protein [Theobroma cacao]
Length = 417
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/80 (53%), Positives = 53/80 (66%)
Frame = +2
Query: 14 ENRPSTSTLPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRRTRTRNPLNSGLWISVELVVN 193
E+RPS+ST + ++ RRS+ YGRR R+ PLNSGLWISVELVV
Sbjct: 60 EDRPSSSTQAPTNQTSSSNRLNSRNSS--FMRRSDGYGRRRRS--PLNSGLWISVELVVT 115
Query: 194 LSQITAAIVVLSLSRHEHPQ 253
+SQI A+IVVLSLSR+E PQ
Sbjct: 116 VSQIIASIVVLSLSRNEKPQ 135
>ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera] gi|297743322|emb|CBI36189.3| unnamed protein
product [Vitis vinifera]
Length = 416
Score = 70.9 bits (172), Expect = 2e-10
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = +2
Query: 14 ENRPSTSTLPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRRTRTRNPLNSGLWISVELVVN 193
E RPS+ST + ++ RRS+ Y RR R+ PLNSGLWISVELVV
Sbjct: 61 EERPSSSTQTPTNQTSSNRLNSRNSS---FMRRSDGYSRRRRS--PLNSGLWISVELVVT 115
Query: 194 LSQITAAIVVLSLSRHEHPQ 253
+SQI A+IVVLSLSRHE+P+
Sbjct: 116 VSQIIASIVVLSLSRHENPR 135
>ref|NP_001169753.1| uncharacterized LOC100383634 [Zea mays] gi|223975755|gb|ACN32065.1|
unknown [Zea mays] gi|224031459|gb|ACN34805.1| unknown
[Zea mays] gi|413939252|gb|AFW73803.1| putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/79 (50%), Positives = 49/79 (62%)
Frame = +2
Query: 17 NRPSTSTLPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRRTRTRNPLNSGLWISVELVVNL 196
+RPST L + TRR++NY RR R+ PLNSGLWIS+E++VN
Sbjct: 42 DRPSTRALVPALQAPSAIGAVPITGHTSGTRRNDNYVRRHRS--PLNSGLWISIEVIVNF 99
Query: 197 SQITAAIVVLSLSRHEHPQ 253
SQI AAIVVL +SR EHPQ
Sbjct: 100 SQIVAAIVVLCVSRKEHPQ 118
>ref|XP_006465443.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X5
[Citrus sinensis]
Length = 369
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RR + YGRR R+ PLNSGLWISVEL+V +SQI A+IVVLSLSR+E+PQ
Sbjct: 37 RRGDGYGRRRRS--PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQ 83
>ref|XP_006465441.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X3
[Citrus sinensis] gi|568822028|ref|XP_006465442.1|
PREDICTED: E3 ubiquitin-protein ligase At1g12760-like
isoform X4 [Citrus sinensis]
Length = 423
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RR + YGRR R+ PLNSGLWISVEL+V +SQI A+IVVLSLSR+E+PQ
Sbjct: 91 RRGDGYGRRRRS--PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQ 137
>ref|XP_006465440.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2
[Citrus sinensis]
Length = 425
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RR + YGRR R+ PLNSGLWISVEL+V +SQI A+IVVLSLSR+E+PQ
Sbjct: 93 RRGDGYGRRRRS--PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQ 139
>ref|XP_006465439.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X1
[Citrus sinensis]
Length = 437
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +2
Query: 107 RRSNNYGRRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
RR + YGRR R+ PLNSGLWISVEL+V +SQI A+IVVLSLSR+E+PQ
Sbjct: 105 RRGDGYGRRRRS--PLNSGLWISVELIVTVSQIIASIVVLSLSRNENPQ 151
>ref|XP_002309588.2| zinc finger family protein [Populus trichocarpa]
gi|550337127|gb|EEE93111.2| zinc finger family protein
[Populus trichocarpa]
Length = 429
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/83 (48%), Positives = 49/83 (59%)
Frame = +2
Query: 2 ATYDENRPSTSTLPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRRTRTRNPLNSGLWISVE 181
A+ E+RPS+ + + L RR G R R+PLNSGLWISVE
Sbjct: 57 ASSHEDRPSSGVRAPSTQPSTSLSNGTNSRSSSLIRR----GEARRRRSPLNSGLWISVE 112
Query: 182 LVVNLSQITAAIVVLSLSRHEHP 250
LV+ LSQI A+IVVLS+SRHEHP
Sbjct: 113 LVLTLSQIVASIVVLSVSRHEHP 135
>gb|EMJ16628.1| hypothetical protein PRUPE_ppa006140mg [Prunus persica]
Length = 425
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = +2
Query: 14 ENRPSTSTLPRVSMLTAXXXXXXXXXXXXLTRRSNNYGRRTRTRNPLNSGLWISVELVVN 193
E+RPS ST + RR + Y RR R+ PLNSGLWISVELVV
Sbjct: 61 EDRPSASTHAPTYQAASSSSNRLNSRNSSFMRRGDGYSRRRRS--PLNSGLWISVELVVT 118
Query: 194 LSQITAAIVVLSLSRHEHPQ 253
+SQI A+IVVLSLS +E+PQ
Sbjct: 119 VSQIIASIVVLSLSTNENPQ 138
>gb|EXC20793.1| E3 ubiquitin-protein ligase [Morus notabilis]
Length = 432
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/52 (63%), Positives = 43/52 (82%), Gaps = 3/52 (5%)
Frame = +2
Query: 110 RSNNYGRRTRTRN---PLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQT 256
R++++ RR TR+ PLNSGLWIS+ELV+ + QI A+IVVLSLSRHEHP+T
Sbjct: 88 RNSSFARRGDTRHRRSPLNSGLWISIELVLTIGQIVASIVVLSLSRHEHPRT 139
>ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays] gi|224033719|gb|ACN35935.1|
unknown [Zea mays] gi|414876051|tpg|DAA53182.1| TPA:
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 410
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +2
Query: 128 RRTRTRNPLNSGLWISVELVVNLSQITAAIVVLSLSRHEHPQ 253
R R +NPLNSG WIS+EL+VNLSQI AA+VVLS+SR+EHPQ
Sbjct: 74 RGHRQQNPLNSGFWISIELIVNLSQIVAAVVVLSVSRNEHPQ 115