BLASTX nr result

ID: Zingiber23_contig00026260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00026260
         (337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004957596.1| PREDICTED: LOW QUALITY PROTEIN: protein ACCU...    57   3e-06
ref|XP_003576822.1| PREDICTED: protein ACCUMULATION AND REPLICAT...    56   4e-06

>ref|XP_004957596.1| PREDICTED: LOW QUALITY PROTEIN: protein ACCUMULATION AND
           REPLICATION OF CHLOROPLASTS 3-like [Setaria italica]
          Length = 745

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
 Frame = +2

Query: 131 GVSARRDFPGARRRKPSLRLRVEA------ETTLGCARIDRSEPVEVIGIGSRKDALIEF 292
           G S RR  P  R R+   R R+        E   G +R   +EPVEV+G+GSRKDA+I+F
Sbjct: 18  GTSRRRLAPSTRGRRSRSRRRIHGVRAAALEAAEGASRA--TEPVEVVGVGSRKDAVIDF 75

Query: 293 CLNSPSFSESRLRLW 337
           C+ S + S + +R W
Sbjct: 76  CMGSRTLSSTPIRFW 90


>ref|XP_003576822.1| PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS
           3-like [Brachypodium distachyon]
          Length = 740

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = +2

Query: 137 SARRDFPGARRRKPSLRLRVEAETTLGCARIDRSEPVEVIGIGSRKDALIEFCLNSPSFS 316
           S+ R     RRR P +R   EA    G  R  + EPVEV+G+GSRKDA+I+FCL S + S
Sbjct: 27  SSPRRHTAPRRRGPGVRAAAEAAG--GAPR--QPEPVEVVGVGSRKDAVIDFCLGSRTLS 82

Query: 317 ESRLRLW 337
            + +R W
Sbjct: 83  STPIRFW 89


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